RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 HHATQ5VTY9 493 aa22.48■■□□□ 1.19
UPF3A-209ENST00000492270 ACAD11Q709F0 780 aa22.48■■□□□ 1.19
UPF3A-209ENST00000492270 TIMP4Q99727 224 aa22.48■■□□□ 1.19
UPF3A-209ENST00000492270 NTMQ9P121 344 aa22.48■■□□□ 1.19
UPF3A-209ENST00000492270 FBXL2Q9UKC9 423 aa22.48■■□□□ 1.19
UPF3A-209ENST00000492270 EPB41L3Q9Y2J2 1087 aaPredicted RBP22.48■■□□□ 1.19
UPF3A-209ENST00000492270 ADGRG4Q8IZF6 3080 aa22.47■■□□□ 1.19
UPF3A-209ENST00000492270 FAM90A27PA6NNH2 459 aa22.47■■□□□ 1.19
UPF3A-209ENST00000492270 KDM4EB2RXH2 506 aaPredicted RBP22.47■■□□□ 1.19
UPF3A-209ENST00000492270 HNRNPRO43390 633 aaKnown RBP22.47■■□□□ 1.19
UPF3A-209ENST00000492270 IGKV1D-16P01601 117 aa22.47■■□□□ 1.19
UPF3A-209ENST00000492270 ACP2P11117 423 aa22.47■■□□□ 1.19
UPF3A-209ENST00000492270 BMP7P18075 431 aa22.47■■□□□ 1.19
UPF3A-209ENST00000492270 GABRA3P34903 492 aa22.47■■□□□ 1.19
UPF3A-209ENST00000492270 EVI2BP34910 448 aa22.47■■□□□ 1.19
UPF3A-209ENST00000492270 RPL3P39023 403 aaKnown RBP22.47■■□□□ 1.19
UPF3A-209ENST00000492270 MAP3K8P41279 467 aa22.47■■□□□ 1.19
UPF3A-209ENST00000492270 MAGOHP61326 146 aaKnown RBP22.47■■□□□ 1.19
UPF3A-209ENST00000492270 DECR1Q16698 335 aa22.47■■□□□ 1.19
UPF3A-209ENST00000492270 VASNQ6EMK4 673 aa22.47■■□□□ 1.19
UPF3A-209ENST00000492270 PLCZ1Q86YW0 608 aa22.47■■□□□ 1.19
UPF3A-209ENST00000492270 RIMKLAQ8IXN7 391 aa22.47■■□□□ 1.19
UPF3A-209ENST00000492270 HOXB13Q92826 284 aaPredicted RBP22.47■■□□□ 1.19
UPF3A-209ENST00000492270 TLCD1Q96CP7 247 aa22.47■■□□□ 1.19
UPF3A-209ENST00000492270 OTUB1Q96FW1 271 aaPredicted RBP22.47■■□□□ 1.19
UPF3A-209ENST00000492270 MS4A4EQ96PG1 132 aa22.47■■□□□ 1.19
UPF3A-209ENST00000492270 UGT2B28Q9BY64 529 aa22.47■■□□□ 1.19
UPF3A-209ENST00000492270 RTN4RQ9BZR6 473 aa22.47■■□□□ 1.19
UPF3A-209ENST00000492270 AKTIPQ9H8T0 292 aa22.47■■□□□ 1.19
UPF3A-209ENST00000492270 TMBIM4Q9HC24 238 aa22.47■■□□□ 1.19
UPF3A-209ENST00000492270 CHST11Q9NPF2 352 aa22.47■■□□□ 1.19
UPF3A-209ENST00000492270 PNPOQ9NVS9 261 aa22.47■■□□□ 1.19
UPF3A-209ENST00000492270 HAO1Q9UJM8 370 aa22.47■■□□□ 1.19
UPF3A-209ENST00000492270 EIF3LQ9Y262 564 aaKnown RBP22.47■■□□□ 1.19
UPF3A-209ENST00000492270 A0A1W2PRB8 838 aa22.46■■□□□ 1.19
UPF3A-209ENST00000492270 NKX2-6A6NCS4 301 aa22.46■■□□□ 1.19
UPF3A-209ENST00000492270 EMC8O43402 210 aa22.46■■□□□ 1.19
UPF3A-209ENST00000492270 FADS1O60427 444 aa22.46■■□□□ 1.19
UPF3A-209ENST00000492270 CBR3O75828 277 aa22.46■■□□□ 1.19
UPF3A-209ENST00000492270 IL33O95760 270 aa22.46■■□□□ 1.19
UPF3A-209ENST00000492270 PRF1P14222 555 aa22.46■■□□□ 1.19
UPF3A-209ENST00000492270 CHRNB4P30926 498 aa22.46■■□□□ 1.19
UPF3A-209ENST00000492270 ADH7P40394 386 aa22.46■■□□□ 1.19
UPF3A-209ENST00000492270 KIR3DL1P43629 444 aa22.46■■□□□ 1.19
UPF3A-209ENST00000492270 MRPS22P82650 360 aaKnown RBP22.46■■□□□ 1.19
UPF3A-209ENST00000492270 EMX2Q04743 252 aa22.46■■□□□ 1.19
UPF3A-209ENST00000492270 CPTPQ5TA50 214 aa22.46■■□□□ 1.19
UPF3A-209ENST00000492270 GALNT10Q86SR1 603 aa22.46■■□□□ 1.19
UPF3A-209ENST00000492270 OR10Q1Q8NGQ4 319 aa22.46■■□□□ 1.19
UPF3A-209ENST00000492270 GPR151Q8TDV0 419 aa22.46■■□□□ 1.19
UPF3A-209ENST00000492270 ASB5Q8WWX0 329 aa22.46■■□□□ 1.19
UPF3A-209ENST00000492270 SLC9A6Q92581 669 aa22.46■■□□□ 1.19
UPF3A-209ENST00000492270 FAM120BQ96EK7 910 aaKnown RBP22.46■■□□□ 1.19
UPF3A-209ENST00000492270 RMND5BQ96G75 393 aaPredicted RBP22.46■■□□□ 1.19
UPF3A-209ENST00000492270 C16orf58Q96GQ5 468 aa22.46■■□□□ 1.19
UPF3A-209ENST00000492270 UCK2Q9BZX2 261 aa22.46■■□□□ 1.19
UPF3A-209ENST00000492270 OR2B2Q9GZK3 357 aa22.46■■□□□ 1.19
UPF3A-209ENST00000492270 DOCK7Q96N67 2140 aa22.46■■□□□ 1.19
UPF3A-209ENST00000492270 INTS1Q8N201 2190 aaKnown RBP22.45■■□□□ 1.18
UPF3A-209ENST00000492270 A0A0G2JNJ9 132 aa22.45■■□□□ 1.18
UPF3A-209ENST00000492270 NKX2-2O95096 273 aa22.45■■□□□ 1.18
UPF3A-209ENST00000492270 GABRA1P14867 456 aa22.45■■□□□ 1.18
UPF3A-209ENST00000492270 WNT3P56703 355 aa22.45■■□□□ 1.18
UPF3A-209ENST00000492270 MAD2L1Q13257 205 aaPredicted RBP22.45■■□□□ 1.18
UPF3A-209ENST00000492270 MLC1Q15049 377 aa22.45■■□□□ 1.18
UPF3A-209ENST00000492270 NHSL2Q5HYW2 709 aa22.45■■□□□ 1.18
UPF3A-209ENST00000492270 MFSD12Q6NUT3 480 aa22.45■■□□□ 1.18
UPF3A-209ENST00000492270 SEM1Q6ZVN7 128 aa22.45■■□□□ 1.18
UPF3A-209ENST00000492270 CDRT4Q8N9R6 151 aa22.45■■□□□ 1.18
UPF3A-209ENST00000492270 SLC16A11Q8NCK7 471 aa22.45■■□□□ 1.18
UPF3A-209ENST00000492270 OR14L1PQ8NHC6 308 aa22.45■■□□□ 1.18
UPF3A-209ENST00000492270 CEP70Q8NHQ1 597 aa22.45■■□□□ 1.18
UPF3A-209ENST00000492270 YIPF4Q9BSR8 244 aa22.45■■□□□ 1.18
UPF3A-209ENST00000492270 NUF2Q9BZD4 464 aa22.45■■□□□ 1.18
UPF3A-209ENST00000492270 PRDM14Q9GZV8 571 aa22.45■■□□□ 1.18
UPF3A-209ENST00000492270 C3orf14Q9HBI5 128 aa22.45■■□□□ 1.18
UPF3A-209ENST00000492270 ZCCHC3Q9NUD5 404 aaKnown RBP22.45■■□□□ 1.18
UPF3A-209ENST00000492270 ASIC5Q9NY37 505 aa22.45■■□□□ 1.18
UPF3A-209ENST00000492270 NOP53Q9NZM5 478 aaKnown RBP22.45■■□□□ 1.18
UPF3A-209ENST00000492270 Q9UFV3 132 aa22.45■■□□□ 1.18
UPF3A-209ENST00000492270 CAMK2AQ9UQM7 478 aa22.45■■□□□ 1.18
UPF3A-209ENST00000492270 PCDHGB3Q9Y5G1 929 aa22.45■■□□□ 1.18
UPF3A-209ENST00000492270 DCHS2Q6V1P9 2916 aa22.45■■□□□ 1.18
UPF3A-209ENST00000492270 SNUPNO95149 360 aaKnown RBP22.44■■□□□ 1.18
UPF3A-209ENST00000492270 C6orf47O95873 294 aa22.44■■□□□ 1.18
UPF3A-209ENST00000492270 PRPS1L1P21108 318 aa22.44■■□□□ 1.18
UPF3A-209ENST00000492270 TCEA1P23193 301 aaKnown RBP22.44■■□□□ 1.18
UPF3A-209ENST00000492270 DIO3P55073 304 aa22.44■■□□□ 1.18
UPF3A-209ENST00000492270 NOTCH2Q04721 2471 aa22.44■■□□□ 1.18
UPF3A-209ENST00000492270 STX5Q13190 355 aa22.44■■□□□ 1.18
UPF3A-209ENST00000492270 LILRB4Q8NHJ6 448 aa22.44■■□□□ 1.18
UPF3A-209ENST00000492270 ABTB1Q969K4 478 aaPredicted RBP22.44■■□□□ 1.18
UPF3A-209ENST00000492270 COQ8BQ96D53 544 aa22.44■■□□□ 1.18
UPF3A-209ENST00000492270 CXorf36Q9H7Y0 433 aa22.44■■□□□ 1.18
UPF3A-209ENST00000492270 ATAD3AQ9NVI7 634 aa22.44■■□□□ 1.18
UPF3A-209ENST00000492270 PPP4R1LQ9P1A2 415 aa22.44■■□□□ 1.18
UPF3A-209ENST00000492270 SNX8Q9Y5X2 465 aa22.44■■□□□ 1.18
UPF3A-209ENST00000492270 TTC36A6NLP5 189 aa22.43■■□□□ 1.18
UPF3A-209ENST00000492270 KCNH1O95259 989 aa22.43■■□□□ 1.18
UPF3A-209ENST00000492270 UTS2O95399 124 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms