RNA–Protein interactions for RNA: ENST00000490814.6

BRD9-209, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,477 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-209ENST00000490814 GPN3Q9UHW5 284 aaPredicted RBP9.59□□□□□ -0.87
BRD9-209ENST00000490814 PLAGL1Q9UM63 463 aa9.59□□□□□ -0.87
BRD9-209ENST00000490814 SNX11Q9Y5W9 270 aa9.59□□□□□ -0.87
BRD9-209ENST00000490814 RP1L1Q8IWN7 2480 aaPredicted RBP9.59□□□□□ -0.87
BRD9-209ENST00000490814 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.58□□□□□ -0.88
BRD9-209ENST00000490814 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.58□□□□□ -0.88
BRD9-209ENST00000490814 MFSD2BA6NFX1 497 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 DNASE2O00115 360 aaPredicted RBP9.58□□□□□ -0.88
BRD9-209ENST00000490814 HPGDSO60760 199 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 FAM76BQ5HYJ3 339 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 HIST2H2AA3Q6FI13 130 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 LAPTM4BQ86VI4 370 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 ZBED6CLQ96FA7 236 aaPredicted RBP9.58□□□□□ -0.88
BRD9-209ENST00000490814 TSSK6Q9BXA6 273 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 POLR2J3Q9H1A7 115 aaKnown RBP9.58□□□□□ -0.88
BRD9-209ENST00000490814 ACER3Q9NUN7 267 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 MAB21L2Q9Y586 359 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 TNRC18O15417 2968 aaPredicted RBP9.58□□□□□ -0.88
BRD9-209ENST00000490814 THSD7BQ9C0I4 1608 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 SYNDIG1LA6NDD5 238 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 SEMG1P04279 462 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 IL3P08700 152 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 GABRB1P18505 474 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 PTNP21246 168 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 AVPR1BP47901 424 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 P2RY4P51582 365 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 MANFP55145 182 aaKnown RBP9.58□□□□□ -0.88
BRD9-209ENST00000490814 RAE1P78406 368 aaKnown RBP9.58□□□□□ -0.88
BRD9-209ENST00000490814 GLYR1Q49A26 553 aaPredicted RBP9.58□□□□□ -0.88
BRD9-209ENST00000490814 MPPE1Q53F39 396 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 SPIN4Q56A73 249 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 TOR1AIP1Q5JTV8 583 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 PLEKHS1Q5SXH7 462 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 CCDC149Q6ZUS6 474 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 WDR20Q8TBZ3 569 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 POF1BQ8WVV4 589 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 IL17FQ96PD4 163 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 SEMA3GQ9NS98 782 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 GPATCH2Q9NW75 528 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 RBFOX1Q9NWB1 397 aaKnown RBP9.58□□□□□ -0.88
BRD9-209ENST00000490814 BTNL2Q9UIR0 455 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 YBX2Q9Y2T7 364 aaKnown RBP9.58□□□□□ -0.88
BRD9-209ENST00000490814 PRKAB1Q9Y478 270 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 SCN5AQ14524 2016 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 PRAMEF25A6NGN4 478 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 STATHP02808 62 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 SMIM6P0DI80 62 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 SSTR2P30874 369 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 DCDC1P59894 354 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 TBPL1P62380 186 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 ARSIQ5FYB1 569 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 DCST1Q5T197 706 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 SHFQ7M4L6 423 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 ADCK2Q7Z695 626 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 RBM45Q8IUH3 476 aaKnown RBP9.58□□□□□ -0.88
BRD9-209ENST00000490814 NSMAFQ92636 917 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 EXOSC8Q96B26 276 aaKnown RBP9.58□□□□□ -0.88
BRD9-209ENST00000490814 TIFAQ96CG3 184 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 C10orf90Q96M02 699 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 MAPKAP1Q9BPZ7 522 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 CNOT2Q9NZN8 540 aaKnown RBP9.58□□□□□ -0.88
BRD9-209ENST00000490814 MIOXQ9UGB7 285 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 LAMP5Q9UJQ1 280 aa9.58□□□□□ -0.88
BRD9-209ENST00000490814 C1orf226A1L170 272 aa9.57□□□□□ -0.88
BRD9-209ENST00000490814 HYKKA2RU49 373 aa9.57□□□□□ -0.88
BRD9-209ENST00000490814 EFCAB7A8K855 629 aa9.57□□□□□ -0.88
BRD9-209ENST00000490814 GFYI3L273 518 aa9.57□□□□□ -0.88
BRD9-209ENST00000490814 KPNA3O00505 521 aaPredicted RBP9.57□□□□□ -0.88
BRD9-209ENST00000490814 MPZL2O60487 215 aa9.57□□□□□ -0.88
BRD9-209ENST00000490814 POP7O75817 140 aaKnown RBP9.57□□□□□ -0.88
BRD9-209ENST00000490814 EIF3GO75821 320 aaKnown RBP eCLIP9.57□□□□□ -0.88
BRD9-209ENST00000490814 NCR1O76036 304 aa9.57□□□□□ -0.88
BRD9-209ENST00000490814 IFNA4P05014 189 aa9.57□□□□□ -0.88
BRD9-209ENST00000490814 MPC1LP0DKB6 136 aa9.57□□□□□ -0.88
BRD9-209ENST00000490814 ZNF8P17098 575 aaPredicted RBP9.57□□□□□ -0.88
BRD9-209ENST00000490814 IMPA1P29218 277 aa9.57□□□□□ -0.88
BRD9-209ENST00000490814 XKP51811 444 aa9.57□□□□□ -0.88
BRD9-209ENST00000490814 POLR2LP62875 67 aaKnown RBP9.57□□□□□ -0.88
BRD9-209ENST00000490814 GPM6BQ13491 265 aa9.57□□□□□ -0.88
BRD9-209ENST00000490814 TRAM2Q15035 370 aa9.57□□□□□ -0.88
BRD9-209ENST00000490814 FCN2Q15485 313 aa9.57□□□□□ -0.88
BRD9-209ENST00000490814 RNASE12Q5GAN4 147 aaKnown RBP9.57□□□□□ -0.88
BRD9-209ENST00000490814 C1orf53Q5VUE5 145 aa9.57□□□□□ -0.88
BRD9-209ENST00000490814 GRHL2Q6ISB3 625 aa9.57□□□□□ -0.88
BRD9-209ENST00000490814 BHLHB9Q6PI77 547 aa9.57□□□□□ -0.88
BRD9-209ENST00000490814 RTL4Q6ZR62 310 aa9.57□□□□□ -0.88
BRD9-209ENST00000490814 DDX53Q86TM3 631 aaKnown RBP9.57□□□□□ -0.88
BRD9-209ENST00000490814 LSRQ86X29 649 aaPredicted RBP9.57□□□□□ -0.88
BRD9-209ENST00000490814 OXR1Q8N573 874 aa9.57□□□□□ -0.88
BRD9-209ENST00000490814 C12orf76Q8N812 135 aaPredicted RBP9.57□□□□□ -0.88
BRD9-209ENST00000490814 OR52N2Q8NGI0 321 aa9.57□□□□□ -0.88
BRD9-209ENST00000490814 OR52P1PQ8NH57 321 aa9.57□□□□□ -0.88
BRD9-209ENST00000490814 XAGE5Q8WWM1 108 aa9.57□□□□□ -0.88
BRD9-209ENST00000490814 OVCA2Q8WZ82 227 aa9.57□□□□□ -0.88
BRD9-209ENST00000490814 SLC25A46Q96AG3 418 aa9.57□□□□□ -0.88
BRD9-209ENST00000490814 C11orf24Q96F05 449 aaPredicted RBP9.57□□□□□ -0.88
BRD9-209ENST00000490814 SORCS2Q96PQ0 1159 aa9.57□□□□□ -0.88
BRD9-209ENST00000490814 OR51M1Q9H341 326 aa9.57□□□□□ -0.88
BRD9-209ENST00000490814 HEXA-AS1Q9H8Q6 139 aa9.57□□□□□ -0.88
BRD9-209ENST00000490814 NDRG3Q9UGV2 375 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms