RNA–Protein interactions for RNA: ENST00000489656.5

VPS26A-205, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-205ENST00000489656 PIK3R3Q92569 461 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 ADIPOR1Q96A54 375 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 NACC2Q96BF6 587 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 VMP1Q96GC9 406 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 COL21A1Q96P44 957 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 GPR87Q9BY21 358 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 ZNF700Q9H0M5 742 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 SEC14L3Q9UDX4 400 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 CDV3Q9UKY7 258 aaKnown RBP13.12□□□□□ -0.31
VPS26A-205ENST00000489656 WDR45Q9Y484 360 aa13.12□□□□□ -0.31
VPS26A-205ENST00000489656 STMND1H3BQB6 276 aa13.11□□□□□ -0.31
VPS26A-205ENST00000489656 SYT5O00445 386 aa13.11□□□□□ -0.31
VPS26A-205ENST00000489656 TO15178 435 aa13.11□□□□□ -0.31
VPS26A-205ENST00000489656 DPM1O60762 260 aa13.11□□□□□ -0.31
VPS26A-205ENST00000489656 DEAF1O75398 565 aaPredicted RBP13.11□□□□□ -0.31
VPS26A-205ENST00000489656 PRSS23O95084 383 aa13.11□□□□□ -0.31
VPS26A-205ENST00000489656 ALPPP05187 535 aa13.11□□□□□ -0.31
VPS26A-205ENST00000489656 TCN2P20062 427 aa13.11□□□□□ -0.31
VPS26A-205ENST00000489656 MMP11P24347 488 aa13.11□□□□□ -0.31
VPS26A-205ENST00000489656 PIGAP37287 484 aa13.11□□□□□ -0.31
VPS26A-205ENST00000489656 STAT5AP42229 794 aa13.11□□□□□ -0.31
VPS26A-205ENST00000489656 SLC26A5P58743 744 aa13.11□□□□□ -0.31
VPS26A-205ENST00000489656 PCOLCEQ15113 449 aa13.11□□□□□ -0.31
VPS26A-205ENST00000489656 DUSP7Q16829 419 aa13.11□□□□□ -0.31
VPS26A-205ENST00000489656 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.11□□□□□ -0.31
VPS26A-205ENST00000489656 IQCCQ4KMZ1 466 aa13.11□□□□□ -0.31
VPS26A-205ENST00000489656 HMBOX1Q6NT76 420 aa13.11□□□□□ -0.31
VPS26A-205ENST00000489656 DHRS4L2Q6PKH6 230 aa13.11□□□□□ -0.31
VPS26A-205ENST00000489656 APCDD1LQ8NCL9 501 aa13.11□□□□□ -0.31
VPS26A-205ENST00000489656 RMND5BQ96G75 393 aaPredicted RBP13.11□□□□□ -0.31
VPS26A-205ENST00000489656 CENPNQ96H22 339 aaPredicted RBP13.11□□□□□ -0.31
VPS26A-205ENST00000489656 TPD52L3Q96J77 140 aa13.11□□□□□ -0.31
VPS26A-205ENST00000489656 LCORQ96JN0 433 aaPredicted RBP13.11□□□□□ -0.31
VPS26A-205ENST00000489656 C7orf34Q96L11 122 aa13.11□□□□□ -0.31
VPS26A-205ENST00000489656 G6PC3Q9BUM1 346 aa13.11□□□□□ -0.31
VPS26A-205ENST00000489656 PINK1Q9BXM7 581 aa13.11□□□□□ -0.31
VPS26A-205ENST00000489656 RSPO3Q9BXY4 272 aaPredicted RBP13.11□□□□□ -0.31
VPS26A-205ENST00000489656 WWTR1Q9GZV5 400 aa13.11□□□□□ -0.31
VPS26A-205ENST00000489656 TRIM45Q9H8W5 580 aaPredicted RBP13.11□□□□□ -0.31
VPS26A-205ENST00000489656 THSD1Q9NS62 852 aa13.11□□□□□ -0.31
VPS26A-205ENST00000489656 DLL3Q9NYJ7 618 aa13.11□□□□□ -0.31
VPS26A-205ENST00000489656 TCFL5Q9UL49 500 aa13.11□□□□□ -0.31
VPS26A-205ENST00000489656 CBLCQ9ULV8 474 aa13.11□□□□□ -0.31
VPS26A-205ENST00000489656 FARSAQ9Y285 508 aaKnown RBP13.11□□□□□ -0.31
VPS26A-205ENST00000489656 IFT52Q9Y366 437 aa13.11□□□□□ -0.31
VPS26A-205ENST00000489656 PCDHGA10Q9Y5H3 936 aa13.11□□□□□ -0.31
VPS26A-205ENST00000489656 HEATR5AQ86XA9 2040 aa13.11□□□□□ -0.31
VPS26A-205ENST00000489656 IGHV1-45A0A0A0MS14 117 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 IGHV3-20A0A0C4DH32 117 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 C2orf92A0A1B0GVN3 265 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 FAM149AA5PLN7 773 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 ACOX3O15254 700 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 FCMRO60667 390 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 RAD1O60671 282 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 DXOO77932 396 aaKnown RBP13.1□□□□□ -0.31
VPS26A-205ENST00000489656 LDLRP01130 860 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 FABP3P05413 133 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 FESP07332 822 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 THBS1P07996 1170 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 PABPC4LP0CB38 370 aaKnown RBP13.1□□□□□ -0.31
VPS26A-205ENST00000489656 SDHBP21912 280 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 LCN1P31025 176 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 PRKAR1BP31321 381 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 PTDSS1P48651 473 aaKnown RBP13.1□□□□□ -0.31
VPS26A-205ENST00000489656 SESN3P58005 492 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 RPS15P62841 145 aaKnown RBP13.1□□□□□ -0.31
VPS26A-205ENST00000489656 KCNC4Q03721 635 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 DNASE1L3Q13609 305 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 OGFRL1Q5TC84 451 aaPredicted RBP13.1□□□□□ -0.31
VPS26A-205ENST00000489656 OLIG3Q7RTU3 272 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 ZDHHC21Q8IVQ6 265 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 SMYD1Q8NB12 490 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 GPR32P1Q8NGA4 272 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 OR10Q1Q8NGQ4 319 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 NUBPLQ8TB37 319 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 SPPL2AQ8TCT8 520 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 NRG4Q8WWG1 115 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 TP53INP1Q96A56 240 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 HSPBAP1Q96EW2 488 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 ZNF354BQ96LW1 612 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 DNAJB9Q9UBS3 223 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 ZNF223Q9UK11 482 aaPredicted RBP13.1□□□□□ -0.31
VPS26A-205ENST00000489656 HS3ST3B1Q9Y662 390 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 CPAMD8Q8IZJ3 1885 aa13.1□□□□□ -0.31
VPS26A-205ENST00000489656 AGAP5A6NIR3 686 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 NPIPB9F8W1W9 429 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 SOCS6O14544 535 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 CLOCKO15516 846 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 PEX1O43933 1283 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 TPST1O60507 370 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 LGI1O95970 557 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 IGKV1D-16P01601 117 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 DBIP07108 87 aaKnown RBP13.09□□□□□ -0.31
VPS26A-205ENST00000489656 COX6A1P12074 109 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 RBMS1P29558 406 aaKnown RBP13.09□□□□□ -0.31
VPS26A-205ENST00000489656 VHLP40337 213 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 PSMD4P55036 377 aaKnown RBP13.09□□□□□ -0.31
VPS26A-205ENST00000489656 RNF4P78317 190 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 VLDLRP98155 873 aa13.09□□□□□ -0.31
VPS26A-205ENST00000489656 SSPNQ14714 243 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms