RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 IGSF6O95976 241 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 PRDX2P32119 198 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 ASMTP46597 345 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 HAND2P61296 217 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 IL1RL1Q01638 556 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 GABPB1Q06547 395 aaPredicted RBP2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 EIF2B1Q14232 305 aaKnown RBP2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 SMC1AQ14683 1233 aaKnown RBP2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 PKN2Q16513 984 aaKnown RBP2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 PPP1R3AQ16821 1122 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 ZNF699Q32M78 642 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 ACSF3Q4G176 576 aaPredicted RBP2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 PARP10Q53GL7 1025 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 MS4A13Q5J8X5 152 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 SLC25A30Q5SVS4 291 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 LDLRAP1Q5SW96 308 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 BEND6Q5SZJ8 279 aaPredicted RBP2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 SEL1L2Q5TEA6 688 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 PRR5LQ6MZQ0 368 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 ADAMTSL5Q6ZMM2 481 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 ZNF600Q6ZNG1 722 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 RBM43Q6ZSC3 357 aaKnown RBP2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 P4HA3Q7Z4N8 544 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 HPS6Q86YV9 775 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 RNF148Q8N7C7 305 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 GPATCH11Q8N954 259 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 DLX4Q92988 240 aaPredicted RBP2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 SAMD8Q96LT4 415 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 NMNAT2Q9BZQ4 307 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 TIGARQ9NQ88 270 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 STARD5Q9NSY2 213 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 GDAP2Q9NXN4 497 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 GPR83Q9NYM4 423 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 PRODH2Q9UF12 536 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 PURGQ9UJV8 347 aaKnown RBP2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 ZNF490Q9ULM2 529 aaPredicted RBP2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 PIN4Q9Y237 131 aaKnown RBP2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 PLEKHA6Q9Y2H5 1048 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 DHRS7Q9Y394 339 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 KLF2Q9Y5W3 355 aaPredicted RBP2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 SMAD5-AS1Q9Y6J3 95 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 TRAPPC8Q9Y2L5 1435 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 HCFC1P51610 2035 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 CNTNAP1P78357 1384 aa2.73□□□□□ -1.97
AC055855.1-201ENST00000489563 COL2A1P02458 1487 aaPredicted RBP2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 STRCP1A6NGW2 1772 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 ZFHX3Q15911 3703 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 CCT8L1PA6NM43 557 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 NPIPA2E9PIF3 369 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 PDLIM1O00151 329 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 LGALS8O00214 317 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 BCL2L11O43521 198 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 PRPSAP2O60256 369 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 ZNF354AO60765 605 aaPredicted RBP2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 SDC3O75056 442 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 ZNF253O75346 499 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 IGHV3-9P01782 118 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 HOXB7P09629 217 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 SLC35G4P0C7Q5 338 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 PVRP15151 417 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 ARF4P18085 180 aaPredicted RBP2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 CCNA2P20248 432 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 PTPN4P29074 926 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 RFC2P35250 354 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 GMFBP60983 142 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 IL9RQ01113 521 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 NAAAQ02083 359 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 ATRQ13535 2644 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 PDIA5Q14554 519 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 LTB4RQ15722 352 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 MICAQ29983 383 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 SPHKAPQ2M3C7 1700 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 FRMPD1Q5SYB0 1578 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 RALGAPA1Q6GYQ0 2036 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 RAET1GQ6H3X3 334 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 IRGCQ6NXR0 463 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 PRSS48Q7RTY5 328 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 SERINC5Q86VE9 423 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 VPS36Q86VN1 386 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 ERICH1Q86X53 443 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 MARCH9Q86YJ5 346 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 FAM71CQ8NEG0 241 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 OR56B1Q8NGI3 324 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 RFESDQ8TAC1 157 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 TYMSOSQ8TAI1 123 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 NCLNQ969V3 563 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 C14orf79Q96F83 325 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 PCNX1Q96RV3 2341 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 HSD3B7Q9H2F3 369 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 FAM114A2Q9NRY5 505 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 SOHLH2Q9NX45 425 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 SENP1Q9P0U3 644 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 MMP24Q9Y5R2 645 aa2.72□□□□□ -1.97
AC055855.1-201ENST00000489563 STAB1Q9NY15 2570 aa2.71□□□□□ -1.98
AC055855.1-201ENST00000489563 NBEAL1Q6ZS30 2694 aa2.71□□□□□ -1.98
AC055855.1-201ENST00000489563 SYNMO15061 1565 aa2.71□□□□□ -1.98
AC055855.1-201ENST00000489563 ZSCAN5CA6NGD5 496 aaPredicted RBP2.71□□□□□ -1.98
AC055855.1-201ENST00000489563 EFCAB7A8K855 629 aa2.71□□□□□ -1.98
AC055855.1-201ENST00000489563 SAP18O00422 153 aaKnown RBP2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms