RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 BOLA3Q53S33 107 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 CCDC183Q5T5S1 534 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 PRSS48Q7RTY5 328 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 TAF8Q7Z7C8 310 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 SLC34A3Q8N130 599 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 PDCL2Q8N4E4 241 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 Q8N9G6 341 aaPredicted RBP2.91□□□□□ -1.94
SSR1-209ENST00000488834 COLGALT1Q8NBJ5 622 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 CCDC110Q8TBZ0 833 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 BRSK1Q8TDC3 778 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 U2AF1L4Q8WU68 220 aaKnown RBP2.91□□□□□ -1.94
SSR1-209ENST00000488834 SLC13A3Q8WWT9 602 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 LHX4Q969G2 390 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 C9orf85Q96MD7 179 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 NSMCE2Q96MF7 247 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 CASD1Q96PB1 797 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 PAXXQ9BUH6 204 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 APOOQ9BUR5 198 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 CARD9Q9H257 536 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 POLE3Q9NRF9 147 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 EXTL2Q9UBQ6 330 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 KCNN3Q9UGI6 736 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 SUN2Q9UH99 717 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 CCPG1Q9ULG6 757 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 WRNQ14191 1432 aaPredicted RBP eCLIP2.91□□□□□ -1.94
SSR1-209ENST00000488834 PEG3Q9GZU2 1588 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 FAM205AQ6ZU69 1335 aa2.91□□□□□ -1.94
SSR1-209ENST00000488834 RAD54L2Q9Y4B4 1467 aa2.9□□□□□ -1.94
SSR1-209ENST00000488834 MFSD2BA6NFX1 497 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 FAM25EA8MYX2 175 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 E7ENQ6 273 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 H0YHG0 523 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 DUSP14O95147 198 aaKnown RBP2.9□□□□□ -1.95
SSR1-209ENST00000488834 CXCL14O95715 111 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 IGHV3-9P01782 118 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 PROS1P07225 676 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 GIG44P09565 113 aaPredicted RBP2.9□□□□□ -1.95
SSR1-209ENST00000488834 HSPA5P11021 654 aaKnown RBP2.9□□□□□ -1.95
SSR1-209ENST00000488834 LAMP1P11279 417 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 ZNF19P17023 458 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 IDSP22304 550 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 TMOD1P28289 359 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 ADSSP30520 456 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 DRD3P35462 400 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 MAGEA8P43361 318 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 NLRP11P59045 1033 aaKnown RBP2.9□□□□□ -1.95
SSR1-209ENST00000488834 ERVPABLB-1P60509 514 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 ACTR1AP61163 376 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 SARNPP82979 210 aaKnown RBP2.9□□□□□ -1.95
SSR1-209ENST00000488834 ASAH1Q13510 395 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 CD226Q15762 336 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 INAQ16352 499 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 ZSCAN26Q16670 478 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 EPC2Q52LR7 807 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 HSP90B2PQ58FF3 399 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 ZNF658Q5TYW1 1059 aaPredicted RBP2.9□□□□□ -1.95
SSR1-209ENST00000488834 SLC25A24Q6NUK1 477 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 ADAMTSL5Q6ZMM2 481 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 ADAMTSL2Q86TH1 951 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 SLC22A16Q86VW1 577 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 UNC5CLQ8IV45 518 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 OR52K2Q8NGK3 314 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 TMEM37Q8WXS4 190 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 MAGEB18Q96M61 343 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 DEFB118Q96PH6 123 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 COQ7Q99807 217 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 TCHPQ9BT92 498 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 PDFQ9HBH1 243 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 SLC35D1Q9NTN3 355 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 VNN3Q9NY84 501 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.9□□□□□ -1.953e-10■□□□□ 8.6
SSR1-209ENST00000488834 NTNG1Q9Y2I2 539 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 ZNF175Q9Y473 711 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 CLCA3PQ9Y6N3 262 aa2.9□□□□□ -1.95
SSR1-209ENST00000488834 DDX49Q9Y6V7 483 aaKnown RBP2.9□□□□□ -1.95
SSR1-209ENST00000488834 IBTKQ9P2D0 1353 aaPredicted RBP2.89□□□□□ -1.95
SSR1-209ENST00000488834 CFAP73A6NFT4 308 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 CCDC169A6NNP5 214 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 GPR89AB7ZAQ6 455 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 G3V3Y1 287 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 H0YCG3 227 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 SGK1O00141 431 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 ARPC1BO15143 372 aaKnown RBP2.89□□□□□ -1.95
SSR1-209ENST00000488834 TYROBPO43914 113 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 SSX5O60225 188 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 PGK2P07205 417 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 GPR89BP0CG08 455 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 TOP1P11387 765 aaKnown RBP2.89□□□□□ -1.95
SSR1-209ENST00000488834 GZMAP12544 262 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 PRG2P13727 222 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 MSNP26038 577 aaKnown RBP2.89□□□□□ -1.95
SSR1-209ENST00000488834 SFNP31947 248 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 HSPA1LP34931 641 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 NPY2RP49146 381 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 P2RY4P51582 365 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 CCL11P51671 97 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 KRTAP12-2P59991 146 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 HAND2P61296 217 aa2.89□□□□□ -1.95
SSR1-209ENST00000488834 EIF2B1Q14232 305 aaKnown RBP2.89□□□□□ -1.95
SSR1-209ENST00000488834 KIAA0040Q15053 153 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms