RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 AMBRA1Q9C0C7 1298 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 MKKSQ9NPJ1 570 aaPredicted RBP11.83□□□□□ -0.52
NELFE-209ENST00000488426 RARRES3Q9UL19 164 aa11.83□□□□□ -0.52
NELFE-209ENST00000488426 FAM32AQ9Y421 112 aaKnown RBP11.83□□□□□ -0.52
NELFE-209ENST00000488426 MAGEA13PA6NCF6 341 aa11.82□□□□□ -0.52
NELFE-209ENST00000488426 CDRT15L2A8MXV6 281 aa11.82□□□□□ -0.52
NELFE-209ENST00000488426 H0YAE9 185 aa11.82□□□□□ -0.52
NELFE-209ENST00000488426 SYT5O00445 386 aa11.82□□□□□ -0.52
NELFE-209ENST00000488426 PRAMEF2O60811 474 aa11.82□□□□□ -0.52
NELFE-209ENST00000488426 SMNDC1O75940 238 aaKnown RBP eCLIP11.82□□□□□ -0.52
NELFE-209ENST00000488426 ALPPP05187 535 aa11.82□□□□□ -0.52
NELFE-209ENST00000488426 RRM2P31350 389 aa11.82□□□□□ -0.52
NELFE-209ENST00000488426 ZNF155Q12901 538 aaPredicted RBP11.82□□□□□ -0.52
NELFE-209ENST00000488426 SLC36A3Q495N2 470 aa11.82□□□□□ -0.52
NELFE-209ENST00000488426 SOWAHCQ53LP3 525 aaPredicted RBP11.82□□□□□ -0.52
NELFE-209ENST00000488426 PRAMEF17Q5VTA0 474 aa11.82□□□□□ -0.52
NELFE-209ENST00000488426 MLIPQ5VWP3 458 aa11.82□□□□□ -0.52
NELFE-209ENST00000488426 RAB11FIP2Q7L804 512 aa11.82□□□□□ -0.52
NELFE-209ENST00000488426 WDR53Q7Z5U6 358 aaPredicted RBP11.82□□□□□ -0.52
NELFE-209ENST00000488426 CARM1Q86X55 608 aa11.82□□□□□ -0.52
NELFE-209ENST00000488426 HS3ST5Q8IZT8 346 aa11.82□□□□□ -0.52
NELFE-209ENST00000488426 DHRSXQ8N5I4 330 aa11.82□□□□□ -0.52
NELFE-209ENST00000488426 OR52R1Q8NGF1 315 aa11.82□□□□□ -0.52
NELFE-209ENST00000488426 WDR36Q8NI36 951 aaKnown RBP11.82□□□□□ -0.52
NELFE-209ENST00000488426 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.82□□□□□ -0.52
NELFE-209ENST00000488426 PMM1Q92871 262 aa11.82□□□□□ -0.52
NELFE-209ENST00000488426 CNBD2Q96M20 576 aa11.82□□□□□ -0.52
NELFE-209ENST00000488426 LMF2Q9BU23 707 aaKnown RBP11.82□□□□□ -0.52
NELFE-209ENST00000488426 YIPF2Q9BWQ6 316 aa11.82□□□□□ -0.52
NELFE-209ENST00000488426 SLC7A5P2Q9GIP4 190 aa11.82□□□□□ -0.52
NELFE-209ENST00000488426 NECTIN3Q9NQS3 549 aa11.82□□□□□ -0.52
NELFE-209ENST00000488426 POLE3Q9NRF9 147 aa11.82□□□□□ -0.52
NELFE-209ENST00000488426 SLC9A8Q9Y2E8 581 aa11.82□□□□□ -0.52
NELFE-209ENST00000488426 PCDHGA8Q9Y5G5 932 aa11.82□□□□□ -0.52
NELFE-209ENST00000488426 MAGED1Q9Y5V3 778 aaPredicted RBP11.82□□□□□ -0.52
NELFE-209ENST00000488426 IGKV3D-11A0A0A0MRZ8 115 aa11.81□□□□□ -0.52
NELFE-209ENST00000488426 JRKO75564 520 aa11.81□□□□□ -0.52
NELFE-209ENST00000488426 NKX2-2O95096 273 aa11.81□□□□□ -0.52
NELFE-209ENST00000488426 ALBP02768 609 aa11.81□□□□□ -0.52
NELFE-209ENST00000488426 HBQ1P09105 142 aa11.81□□□□□ -0.52
NELFE-209ENST00000488426 PABPC4LP0CB38 370 aaKnown RBP11.81□□□□□ -0.52
NELFE-209ENST00000488426 CAPGP40121 348 aa11.81□□□□□ -0.52
NELFE-209ENST00000488426 SPIBQ01892 262 aa11.81□□□□□ -0.52
NELFE-209ENST00000488426 CHRNEQ04844 493 aa11.81□□□□□ -0.52
NELFE-209ENST00000488426 FUT7Q11130 342 aa11.81□□□□□ -0.52
NELFE-209ENST00000488426 PPP1R8Q12972 351 aaKnown RBP11.81□□□□□ -0.52
NELFE-209ENST00000488426 SRSF6Q13247 344 aaKnown RBP11.81□□□□□ -0.52
NELFE-209ENST00000488426 TGIF1Q15583 401 aa11.81□□□□□ -0.52
NELFE-209ENST00000488426 ZNHIT3Q15649 155 aaPredicted RBP11.81□□□□□ -0.52
NELFE-209ENST00000488426 CYP27C1Q4G0S4 372 aa11.81□□□□□ -0.52
NELFE-209ENST00000488426 PHF19Q5T6S3 580 aa11.81□□□□□ -0.52
NELFE-209ENST00000488426 FRRS1Q6ZNA5 592 aa11.81□□□□□ -0.52
NELFE-209ENST00000488426 ZNF605Q86T29 641 aa11.81□□□□□ -0.52
NELFE-209ENST00000488426 CYP4Z1Q86W10 505 aa11.81□□□□□ -0.52
NELFE-209ENST00000488426 COX18Q8N8Q8 333 aa11.81□□□□□ -0.52
NELFE-209ENST00000488426 PMEPA1Q969W9 287 aa11.81□□□□□ -0.52
NELFE-209ENST00000488426 FKBP10Q96AY3 582 aa11.81□□□□□ -0.52
NELFE-209ENST00000488426 PTCHD1Q96NR3 888 aa11.81□□□□□ -0.52
NELFE-209ENST00000488426 RSPO3Q9BXY4 272 aaPredicted RBP11.81□□□□□ -0.52
NELFE-209ENST00000488426 ZNF350Q9GZX5 532 aa11.81□□□□□ -0.52
NELFE-209ENST00000488426 PRORYQ9H606 182 aa11.81□□□□□ -0.52
NELFE-209ENST00000488426 MTHFD2LQ9H903 347 aaPredicted RBP11.81□□□□□ -0.52
NELFE-209ENST00000488426 SMURF2Q9HAU4 748 aa11.81□□□□□ -0.52
NELFE-209ENST00000488426 CACYBPQ9HB71 228 aaKnown RBP11.81□□□□□ -0.52
NELFE-209ENST00000488426 CPNE5Q9HCH3 593 aa11.81□□□□□ -0.52
NELFE-209ENST00000488426 C3orf18Q9UK00 162 aa11.81□□□□□ -0.52
NELFE-209ENST00000488426 IFT52Q9Y366 437 aa11.81□□□□□ -0.52
NELFE-209ENST00000488426 WDR45Q9Y484 360 aa11.81□□□□□ -0.52
NELFE-209ENST00000488426 ORC6Q9Y5N6 252 aa11.81□□□□□ -0.52
NELFE-209ENST00000488426 LYVE1Q9Y5Y7 322 aa11.81□□□□□ -0.52
NELFE-209ENST00000488426 CCDC187A0A096LP49 1063 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 TNFRSF11BO00300 401 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 PLD2O14939 933 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 NME6O75414 186 aaPredicted RBP11.8□□□□□ -0.52
NELFE-209ENST00000488426 SNAP29O95721 258 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 LGI1O95970 557 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 IFNA16P05015 189 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 GUSBP08236 651 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 CCL4P13236 92 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 PRKAR1BP31321 381 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 EMDP50402 254 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 CHN2P52757 468 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 RAD23AP54725 363 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 DUSP8Q13202 625 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 DCST2Q5T1A1 773 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 C1orf189Q5VU69 101 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 DHRS4L2Q6PKH6 230 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 UGT2A3Q6UWM9 527 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 OR7G1Q8NGA0 311 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 DOK4Q8TEW6 326 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 LIN37Q96GY3 246 aaPredicted RBP11.8□□□□□ -0.52
NELFE-209ENST00000488426 SDF2Q99470 211 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 TGIF2Q9GZN2 237 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 SAP130Q9H0E3 1048 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 FOLH1BQ9HBA9 442 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 KCND3Q9UK17 655 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 TESMINQ9Y4I5 508 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 HEMK1Q9Y5R4 338 aaPredicted RBP11.8□□□□□ -0.52
NELFE-209ENST00000488426 BSNQ9UPA5 3926 aa11.8□□□□□ -0.52
NELFE-209ENST00000488426 BOD1L1Q8NFC6 3051 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms