RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 ZNF589Q86UQ0 364 aaPredicted RBP2.22□□□□□ -2.05
CCDC66-221ENST00000487739 SPC24Q8NBT2 197 aa2.22□□□□□ -2.05
CCDC66-221ENST00000487739 OR52J3Q8NH60 311 aa2.22□□□□□ -2.05
CCDC66-221ENST00000487739 RAB39BQ96DA2 213 aa2.22□□□□□ -2.05
CCDC66-221ENST00000487739 ZNF560Q96MR9 790 aa2.22□□□□□ -2.05
CCDC66-221ENST00000487739 GPR137Q96N19 417 aa2.22□□□□□ -2.05
CCDC66-221ENST00000487739 SMIM14Q96QK8 99 aa2.22□□□□□ -2.05
CCDC66-221ENST00000487739 IL4I1Q96RQ9 567 aa2.22□□□□□ -2.05
CCDC66-221ENST00000487739 FAM213AQ9BRX8 229 aa2.22□□□□□ -2.05
CCDC66-221ENST00000487739 TM2D1Q9BX74 207 aa2.22□□□□□ -2.05
CCDC66-221ENST00000487739 GLIPR2Q9H4G4 154 aa2.22□□□□□ -2.05
CCDC66-221ENST00000487739 PIGVQ9NUD9 493 aa2.22□□□□□ -2.05
CCDC66-221ENST00000487739 ACOXLQ9NUZ1 547 aa2.22□□□□□ -2.05
CCDC66-221ENST00000487739 AKAP7Q9P0M2 348 aaPredicted RBP2.22□□□□□ -2.05
CCDC66-221ENST00000487739 MTRRQ9UBK8 725 aa2.22□□□□□ -2.05
CCDC66-221ENST00000487739 WSB1Q9Y6I7 421 aa2.22□□□□□ -2.05
CCDC66-221ENST00000487739 TEX264Q9Y6I9 313 aa2.22□□□□□ -2.05
CCDC66-221ENST00000487739 MACROD2A1Z1Q3 448 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 LRCOL1A6NCL2 159 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 TMEM110-MUSTN1A8MSY1 372 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 KERAO60938 352 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 LYPLA1O75608 230 aaPredicted RBP2.21□□□□□ -2.06
CCDC66-221ENST00000487739 TOXO94900 526 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 SFTPBP07988 381 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 AXLP30530 894 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 NF2P35240 595 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 NSFP46459 744 aaKnown RBP2.21□□□□□ -2.06
CCDC66-221ENST00000487739 CNN1P51911 297 aaKnown RBP2.21□□□□□ -2.06
CCDC66-221ENST00000487739 NLRP11P59045 1033 aaKnown RBP2.21□□□□□ -2.06
CCDC66-221ENST00000487739 TIMM10P62072 90 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 RPL32P62910 135 aaKnown RBP2.21□□□□□ -2.06
CCDC66-221ENST00000487739 BNIP1Q12981 228 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 DAZ2Q13117 558 aaKnown RBP2.21□□□□□ -2.06
CCDC66-221ENST00000487739 PPP2R5CQ13362 524 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 PTCH1Q13635 1447 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 CAMK4Q16566 473 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 CMPK2Q5EBM0 449 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 XKR4Q5GH76 650 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 OR2B11Q5JQS5 317 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 PRR5LQ6MZQ0 368 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 Q7L0L9 218 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 BNIPLQ7Z465 357 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 TMEM110Q86TL2 294 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 SYVN1Q86TM6 617 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 LYPD1Q8N2G4 141 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 PYROXD2Q8N2H3 581 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 ARIH2OSQ8N7S6 290 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 MSANTD4Q8NCY6 345 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 PSMA8Q8TAA3 256 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 DTD2Q96FN9 168 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 CCDC43Q96MW1 224 aaKnown RBP2.21□□□□□ -2.06
CCDC66-221ENST00000487739 DAZ3Q9NR90 486 aaKnown RBP2.21□□□□□ -2.06
CCDC66-221ENST00000487739 NARFQ9UHQ1 456 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 PSG11Q9UQ72 335 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 KLHDC2Q9Y2U9 406 aa2.21□□□□□ -2.06
CCDC66-221ENST00000487739 TDRKHQ9Y2W6 561 aaKnown RBP2.21□□□□□ -2.06
CCDC66-221ENST00000487739 DHX29Q7Z478 1369 aaKnown RBP2.21□□□□□ -2.06
CCDC66-221ENST00000487739 RAD54L2Q9Y4B4 1467 aa2.2□□□□□ -2.06
CCDC66-221ENST00000487739 TRBV7-9A0A0J9YWB2 115 aa2.2□□□□□ -2.06
CCDC66-221ENST00000487739 SEMG1P04279 462 aa2.2□□□□□ -2.06
CCDC66-221ENST00000487739 FCARP24071 287 aa2.2□□□□□ -2.06
CCDC66-221ENST00000487739 PTBP1P26599 531 aaKnown RBP eCLIP2.2□□□□□ -2.06
CCDC66-221ENST00000487739 PMELP40967 661 aa2.2□□□□□ -2.06
CCDC66-221ENST00000487739 RAG2P55895 527 aa2.2□□□□□ -2.06
CCDC66-221ENST00000487739 EIF4EBP1Q13541 118 aaPredicted RBP2.2□□□□□ -2.06
CCDC66-221ENST00000487739 GPNMBQ14956 572 aa2.2□□□□□ -2.06
CCDC66-221ENST00000487739 ZKSCAN8Q15776 578 aaPredicted RBP2.2□□□□□ -2.06
CCDC66-221ENST00000487739 SLC10A5Q5PT55 438 aa2.2□□□□□ -2.06
CCDC66-221ENST00000487739 NKAIN2Q5VXU1 208 aa2.2□□□□□ -2.06
CCDC66-221ENST00000487739 ASPHD2Q6ICH7 369 aa2.2□□□□□ -2.06
CCDC66-221ENST00000487739 FRA10AC1Q70Z53 315 aa2.2□□□□□ -2.06
CCDC66-221ENST00000487739 NEK11Q8NG66 645 aa2.2□□□□□ -2.06
CCDC66-221ENST00000487739 MARCH1Q8TCQ1 289 aa2.2□□□□□ -2.06
CCDC66-221ENST00000487739 P3H4Q92791 437 aa2.2□□□□□ -2.06
CCDC66-221ENST00000487739 C11orf24Q96F05 449 aaPredicted RBP2.2□□□□□ -2.06
CCDC66-221ENST00000487739 NRTNQ99748 197 aa2.2□□□□□ -2.06
CCDC66-221ENST00000487739 ACAT2Q9BWD1 397 aa2.2□□□□□ -2.06
CCDC66-221ENST00000487739 COMMD8Q9NX08 183 aa2.2□□□□□ -2.06
CCDC66-221ENST00000487739 CYP39A1Q9NYL5 469 aa2.2□□□□□ -2.06
CCDC66-221ENST00000487739 VPS54Q9P1Q0 977 aa2.2□□□□□ -2.06
CCDC66-221ENST00000487739 ERVK-18Q9QC07 812 aa2.2□□□□□ -2.06
CCDC66-221ENST00000487739 COPS7AQ9UBW8 275 aa2.2□□□□□ -2.06
CCDC66-221ENST00000487739 FETUBQ9UGM5 382 aa2.2□□□□□ -2.06
CCDC66-221ENST00000487739 ZNF223Q9UK11 482 aaPredicted RBP2.2□□□□□ -2.06
CCDC66-221ENST00000487739 BARX2Q9UMQ3 279 aaPredicted RBP2.2□□□□□ -2.06
CCDC66-221ENST00000487739 NPC1L1Q9UHC9 1359 aa2.2□□□□□ -2.06
CCDC66-221ENST00000487739 A0A0J9YVX5 310 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 A0A0U1RRA0 63 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 ANKRD63C9JTQ0 380 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.19□□□□□ -2.06
CCDC66-221ENST00000487739 PDLIM1O00151 329 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 CFLARO15519 480 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 TBL1XO60907 577 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 ZNF254O75437 659 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 BBOX1O75936 387 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 OLFM2O95897 454 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 ECDO95905 644 aaPredicted RBP2.19□□□□□ -2.06
CCDC66-221ENST00000487739 PNPP00491 289 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 ABHD2P08910 425 aa2.19□□□□□ -2.06
CCDC66-221ENST00000487739 SDC1P18827 310 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms