RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 SAT1P21673 171 aa10.39□□□□□ -0.75
TRIM56-204ENST00000487252 CERS1P27544 350 aa10.39□□□□□ -0.75
TRIM56-204ENST00000487252 SRD5A2P31213 254 aa10.39□□□□□ -0.75
TRIM56-204ENST00000487252 TTKP33981 857 aa10.39□□□□□ -0.75
TRIM56-204ENST00000487252 TMED10P49755 219 aaKnown RBP10.39□□□□□ -0.75
TRIM56-204ENST00000487252 C21orf58P58505 322 aa10.39□□□□□ -0.75
TRIM56-204ENST00000487252 B3GALT5-AS1P59052 145 aa10.39□□□□□ -0.75
TRIM56-204ENST00000487252 RPP38P78345 283 aaKnown RBP10.39□□□□□ -0.75
TRIM56-204ENST00000487252 ELF3P78545 371 aaPredicted RBP10.39□□□□□ -0.75
TRIM56-204ENST00000487252 ID2Q02363 134 aa10.39□□□□□ -0.75
TRIM56-204ENST00000487252 SF3A3Q12874 501 aaKnown RBP eCLIP10.39□□□□□ -0.75
TRIM56-204ENST00000487252 SNTA1Q13424 505 aa10.39□□□□□ -0.75
TRIM56-204ENST00000487252 CSHL1Q14406 222 aa10.39□□□□□ -0.75
TRIM56-204ENST00000487252 TAB1Q15750 504 aa10.39□□□□□ -0.75
TRIM56-204ENST00000487252 MRNIPQ6NTE8 343 aa10.39□□□□□ -0.75
TRIM56-204ENST00000487252 SLC30A6Q6NXT4 461 aa10.39□□□□□ -0.75
TRIM56-204ENST00000487252 BEND4Q6ZU67 534 aa10.39□□□□□ -0.75
TRIM56-204ENST00000487252 STEAP2Q8NFT2 490 aa10.39□□□□□ -0.75
TRIM56-204ENST00000487252 FNDC9Q8TBE3 224 aa10.39□□□□□ -0.75
TRIM56-204ENST00000487252 ZNF418Q8TF45 676 aaPredicted RBP10.39□□□□□ -0.75
TRIM56-204ENST00000487252 SLC5A11Q8WWX8 675 aa10.39□□□□□ -0.75
TRIM56-204ENST00000487252 MRPL24Q96A35 216 aaKnown RBP10.39□□□□□ -0.75
TRIM56-204ENST00000487252 CERS2Q96G23 380 aa10.39□□□□□ -0.75
TRIM56-204ENST00000487252 C7orf26Q96N11 449 aa10.39□□□□□ -0.75
TRIM56-204ENST00000487252 CPNE1Q99829 537 aa10.39□□□□□ -0.75
TRIM56-204ENST00000487252 MYLK2Q9H1R3 596 aa10.39□□□□□ -0.75
TRIM56-204ENST00000487252 PELI2Q9HAT8 420 aa10.39□□□□□ -0.75
TRIM56-204ENST00000487252 PARVBQ9HBI1 364 aa10.39□□□□□ -0.75
TRIM56-204ENST00000487252 FANCFQ9NPI8 374 aa10.39□□□□□ -0.75
TRIM56-204ENST00000487252 SNX15Q9NRS6 342 aa10.39□□□□□ -0.75
TRIM56-204ENST00000487252 DHRS7Q9Y394 339 aa10.39□□□□□ -0.75
TRIM56-204ENST00000487252 A0A088AWK7 358 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 GOLGA8QA0A0J9YX86 632 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 WDR91A4D1P6 747 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 GOLGA8OA6NCC3 632 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 GOLGA8NF8WBI6 632 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 CDC7O00311 574 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 ZIC3O60481 467 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 ICOSLGO75144 302 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 SNNO75324 88 aaPredicted RBP10.38□□□□□ -0.75
TRIM56-204ENST00000487252 ALDOAP04075 364 aaKnown RBP10.38□□□□□ -0.75
TRIM56-204ENST00000487252 BPGMP07738 259 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 ABCB1P08183 1280 aaPredicted RBP10.38□□□□□ -0.75
TRIM56-204ENST00000487252 NQO1P15559 274 aaKnown RBP10.38□□□□□ -0.75
TRIM56-204ENST00000487252 ZNF10P21506 573 aaPredicted RBP10.38□□□□□ -0.75
TRIM56-204ENST00000487252 BGNP21810 368 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 GP5P40197 560 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 CRADDP78560 199 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 SETDB1Q15047 1291 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 CTU2Q2VPK5 515 aaKnown RBP10.38□□□□□ -0.75
TRIM56-204ENST00000487252 PCID2Q5JVF3 399 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 GRTP1Q5TC63 336 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 MROH9Q5TGP6 573 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 FAM91A1Q658Y4 838 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 RNF111Q6ZNA4 994 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 CHMP1BQ7LBR1 199 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 SDCCAG8Q86SQ7 713 aaPredicted RBP10.38□□□□□ -0.75
TRIM56-204ENST00000487252 SNX31Q8N9S9 440 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 OR2L5Q8NG80 312 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 CD200R1Q8TD46 325 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 KCNJ9Q92806 393 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 SFXN2Q96NB2 322 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 AIF1LQ9BQI0 150 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 KIFC1Q9BW19 673 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 METTL17Q9H7H0 456 aaPredicted RBP10.38□□□□□ -0.75
TRIM56-204ENST00000487252 LYRM4Q9HD34 91 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 SAR1AQ9NR31 198 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 DNAJC11Q9NVH1 559 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 EMCNQ9ULC0 261 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 PCDHB10Q9UN67 800 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 SOX13Q9UN79 622 aa10.38□□□□□ -0.75
TRIM56-204ENST00000487252 MTO1Q9Y2Z2 717 aaKnown RBP10.38□□□□□ -0.75
TRIM56-204ENST00000487252 FGF17O60258 216 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 GLRA3O75311 464 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 LY6HO94772 140 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 AQP8O94778 261 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 AIFM1O95831 613 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 ARAFP10398 606 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 OGNP20774 298 aaKnown RBP10.37□□□□□ -0.75
TRIM56-204ENST00000487252 NMBRP28336 390 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 HERVK_113P63132 956 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 ERVK-8P63133 956 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 BIKQ13323 160 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 SP140Q13342 867 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 ATG16L1Q676U5 607 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 UGT3A1Q6NUS8 523 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 RFWD2Q8NHY2 731 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 RDH11Q8TC12 318 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 HSD17B8Q92506 261 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 HGDQ93099 445 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 ADIPOR1Q96A54 375 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 PPWD1Q96BP3 646 aaKnown RBP10.37□□□□□ -0.75
TRIM56-204ENST00000487252 RBM18Q96H35 190 aaKnown RBP10.37□□□□□ -0.75
TRIM56-204ENST00000487252 DGAT2Q96PD7 388 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 TMEM237Q96Q45 408 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 LRRC37BQ96QE4 947 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 HBEGFQ99075 208 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 RBBP8Q99708 897 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 PKP2Q99959 881 aa10.37□□□□□ -0.75
TRIM56-204ENST00000487252 PINK1Q9BXM7 581 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms