RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 CLEC18AA5D8T8 446 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 PRORSD1PA6NEY8 169 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 TTC36A6NLP5 189 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 DUXAA6NLW8 204 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 ASNA1O43681 348 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 SORBS2O94875 1100 aaKnown RBP11.78□□□□□ -0.52
HDAC6-229ENST00000486665 KCNK2O95069 426 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 SOX11P35716 441 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 EEFSECP57772 596 aaKnown RBP11.78□□□□□ -0.52
HDAC6-229ENST00000486665 POU6F2P78424 691 aaPredicted RBP11.78□□□□□ -0.52
HDAC6-229ENST00000486665 MRPS22P82650 360 aaKnown RBP11.78□□□□□ -0.52
HDAC6-229ENST00000486665 TXNL4AP83876 142 aaKnown RBP11.78□□□□□ -0.52
HDAC6-229ENST00000486665 FOXK1P85037 733 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 CEACAM7Q14002 265 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 CCNJQ5T5M9 372 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 DESI1Q6ICB0 168 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 FIGNL1Q6PIW4 674 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 LYPD8Q6UX82 237 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 CLEC18BQ6UXF7 455 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 BNC2Q6ZN30 1099 aaPredicted RBP11.78□□□□□ -0.52
HDAC6-229ENST00000486665 ASRGL1Q7L266 308 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 ZAR1Q86SH2 424 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 GALNT10Q86SR1 603 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 SERPINA11Q86U17 422 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 IFNEQ86WN2 208 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 APLFQ8IW19 511 aaPredicted RBP11.78□□□□□ -0.52
HDAC6-229ENST00000486665 BCORP1Q8N888 145 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 COX18Q8N8Q8 333 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 CLEC18CQ8NCF0 446 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 FAM156AQ8NDB6 213 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 SLC38A5Q8WUX1 472 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 TMBIM1Q969X1 311 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 HSPBAP1Q96EW2 488 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 RMND5BQ96G75 393 aaPredicted RBP11.78□□□□□ -0.52
HDAC6-229ENST00000486665 RASL10BQ96S79 203 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 SDF2Q99470 211 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 THTPAQ9BU02 230 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 BTBD2Q9BX70 525 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 Q9N2J8 555 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 A4GALTQ9NPC4 353 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 CBLCQ9ULV8 474 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 AP3M1Q9Y2T2 418 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 OR10H1Q9Y4A9 318 aa11.78□□□□□ -0.52
HDAC6-229ENST00000486665 SPTAN1Q13813 2472 aaKnown RBP11.77□□□□□ -0.53
HDAC6-229ENST00000486665 K7EM74 188 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 ACOX3O15254 700 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 TSPAN2O60636 221 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 FCMRO60667 390 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 ITGA10O75578 1167 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 DNAJC8O75937 253 aaPredicted RBP11.77□□□□□ -0.53
HDAC6-229ENST00000486665 PDE5AO76074 875 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 AGR2O95994 175 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 CHRM4P08173 479 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 ARAFP10398 606 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 ABCD3P28288 659 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 MSX2P35548 267 aaPredicted RBP11.77□□□□□ -0.53
HDAC6-229ENST00000486665 PIGAP37287 484 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 RASSF2P50749 326 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 ANXA11P50995 505 aaKnown RBP11.77□□□□□ -0.53
HDAC6-229ENST00000486665 AP2B1P63010 937 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 CYP51A1Q16850 503 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 ARHGAP11BQ3KRB8 267 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 CYP27C1Q4G0S4 372 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 DNAL1Q4LDG9 190 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 SAMD4BQ5PRF9 694 aaKnown RBP11.77□□□□□ -0.53
HDAC6-229ENST00000486665 ACER2Q5QJU3 275 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 DCST2Q5T1A1 773 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 ZNF468Q5VIY5 522 aaPredicted RBP11.77□□□□□ -0.53
HDAC6-229ENST00000486665 YTHDF3Q7Z739 585 aaKnown RBP11.77□□□□□ -0.53
HDAC6-229ENST00000486665 TAGAPQ8N103 731 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 SLC34A3Q8N130 599 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 SLC5A8Q8N695 610 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 CHDHQ8NE62 594 aaPredicted RBP11.77□□□□□ -0.53
HDAC6-229ENST00000486665 FDCSPQ8NFU4 85 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 NFKBIDQ8NI38 313 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 OMA1Q96E52 524 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 REXO5Q96IC2 774 aaKnown RBP11.77□□□□□ -0.53
HDAC6-229ENST00000486665 ZNF354BQ96LW1 612 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 LRMDAQ9H2I8 198 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 TMEM38AQ9H6F2 299 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 ZNF552Q9H707 407 aaPredicted RBP11.77□□□□□ -0.53
HDAC6-229ENST00000486665 EXD2Q9NVH0 621 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 GPR83Q9NYM4 423 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 STMN3Q9NZ72 180 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 YARS2Q9Y2Z4 477 aaKnown RBP11.77□□□□□ -0.53
HDAC6-229ENST00000486665 PCDHGB3Q9Y5G1 929 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 NPFFR2Q9Y5X5 522 aa11.77□□□□□ -0.53
HDAC6-229ENST00000486665 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.77□□□□□ -0.53
HDAC6-229ENST00000486665 ERICH4A6NGS2 130 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 FAM220BPB1ANY3 271 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 GCM2O75603 506 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-229ENST00000486665 REM1O75628 298 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 CEACAM4O75871 244 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 SOX30O94993 753 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 OR6B1O95007 311 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 IL33O95760 270 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 ALPPP05187 535 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 NR2F1P10589 423 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 PGM1P36871 562 aa11.76□□□□□ -0.53
HDAC6-229ENST00000486665 CASRP41180 1078 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms