RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 ZDHHC2Q9UIJ5 367 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 MRTO4Q9UKD2 239 aaKnown RBP6.39□□□□□ -1.39
VPS50-218ENST00000485994 CBLCQ9ULV8 474 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 MAPRE3Q9UPY8 281 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 POLR3HQ9Y535 204 aaPredicted RBP6.39□□□□□ -1.39
VPS50-218ENST00000485994 FAM215AQ9Y5M1 114 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 LIPGQ9Y5X9 500 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 MYO9AB2RTY4 2548 aa6.39□□□□□ -1.39
VPS50-218ENST00000485994 ANKHD1Q8IWZ3 2542 aaKnown RBP6.39□□□□□ -1.39
VPS50-218ENST00000485994 CD8B2A6NJW9 211 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 HSPB2A8KAH6 182 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 LINC01387J3KSC0 135 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 SYT5O00445 386 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 RGS16O15492 202 aaPredicted RBP6.38□□□□□ -1.39
VPS50-218ENST00000485994 PDPK1O15530 556 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 ZIC3O60481 467 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 SPAG7O75391 227 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 NKX2-2O95096 273 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 HSPA4LO95757 839 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 IL33O95760 270 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 JUNP05412 331 aaKnown RBP6.38□□□□□ -1.39
VPS50-218ENST00000485994 CHRNGP07510 517 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 NGFRP08138 427 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 BCKDHAP12694 445 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 COX6B1P14854 86 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 BMP7P18075 431 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 CAPN3P20807 821 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 CHMP24386 653 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 GRK2P25098 689 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 GDF1P27539 372 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 SSTR2P30874 369 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 SRD5A2P31213 254 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 ARRB2P32121 409 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 KRT20P35900 424 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 PEX19P40855 299 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 SERPINB4P48594 390 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 MANFP55145 182 aaKnown RBP6.38□□□□□ -1.39
VPS50-218ENST00000485994 GFRA1P56159 465 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 EEF1A1P68104 462 aaKnown RBP6.38□□□□□ -1.39
VPS50-218ENST00000485994 OCRLQ01968 901 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 EMX2Q04743 252 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 ZNF844Q08AG5 666 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 HSPB2Q16082 182 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 BCL2A1Q16548 175 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 DECR1Q16698 335 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 SLC25A35Q3KQZ1 300 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 KRT71Q3SY84 523 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 VPS26BQ4G0F5 336 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 C6orf136Q5SQH8 315 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 C1orf185Q5T7R7 199 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 EEF1A1P5Q5VTE0 462 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 NSUN5P2Q63ZY6 315 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 BICRALQ6AI39 1079 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 ZNF585AQ6P3V2 769 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 NPSR1Q6W5P4 371 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 C3P1Q6ZMU1 363 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 LARP4Q71RC2 724 aaKnown RBP eCLIP6.38□□□□□ -1.39
VPS50-218ENST00000485994 SLC44A2Q8IWA5 706 aaPredicted RBP6.38□□□□□ -1.39
VPS50-218ENST00000485994 RIMKLAQ8IXN7 391 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 PRR22Q8IZ63 422 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 ZNF295-AS1Q8N0V1 137 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 LIX1Q8N485 282 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 FAM83FQ8NEG4 500 aaPredicted RBP6.38□□□□□ -1.39
VPS50-218ENST00000485994 OR5M9Q8NGP3 310 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 OR5M3Q8NGP4 307 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 ZFP28Q8NHY6 868 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 TWIST2Q8WVJ9 160 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 ABTB1Q969K4 478 aaPredicted RBP6.38□□□□□ -1.39
VPS50-218ENST00000485994 WDYHV1Q96HA8 205 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 PKNOX2Q96KN3 472 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 JSRP1Q96MG2 331 aaPredicted RBP6.38□□□□□ -1.39
VPS50-218ENST00000485994 ADOQ96SZ5 270 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 MECRQ9BV79 373 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 OSBPL11Q9BXB4 747 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 OR2B2Q9GZK3 357 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 EXO5Q9H790 373 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 METTL7AQ9H8H3 244 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 ANKRA2Q9H9E1 313 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 C3orf14Q9HBI5 128 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 Q9N2J8 555 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 KCNJ16Q9NPI9 418 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 SDHAF3Q9NRP4 125 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 ASIC5Q9NY37 505 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 ABCG2Q9UNQ0 655 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 WIF1Q9Y5W5 379 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 PDZD2O15018 2839 aa6.38□□□□□ -1.39
VPS50-218ENST00000485994 CCDC168Q8NDH2 2452 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 AKAP6Q13023 2319 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 HEATR5AQ86XA9 2040 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 IGLV3-32A0A0A0MS00 114 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 A0A0G2JNJ9 132 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 MBD3L4A6NDZ8 208 aaPredicted RBP6.37□□□□□ -1.39
VPS50-218ENST00000485994 MBD3L3A6NE82 208 aaPredicted RBP6.37□□□□□ -1.39
VPS50-218ENST00000485994 PRAMEF25A6NGN4 478 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 MBD3L5A6NJ08 208 aaPredicted RBP6.37□□□□□ -1.39
VPS50-218ENST00000485994 GNB5O14775 395 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 MSTNO14793 375 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 PIP5K1BO14986 540 aa6.37□□□□□ -1.39
VPS50-218ENST00000485994 EMC8O43402 210 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms