RNA–Protein interactions for RNA: ENST00000485833.1

SMARCC1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 5

Gene SMARCC1, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-207ENST00000485833 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.59□□□□□ -1.83
SMARCC1-207ENST00000485833 PYCR2Q96C36 320 aa3.59□□□□□ -1.83
SMARCC1-207ENST00000485833 GLT8D2Q9H1C3 349 aa3.59□□□□□ -1.83
SMARCC1-207ENST00000485833 ANKEF1Q9NU02 776 aa3.59□□□□□ -1.83
SMARCC1-207ENST00000485833 WDR35Q9P2L0 1181 aa3.59□□□□□ -1.83
SMARCC1-207ENST00000485833 FBXL4Q9UKA2 621 aa3.59□□□□□ -1.83
SMARCC1-207ENST00000485833 NAP1L2Q9ULW6 460 aaPredicted RBP3.59□□□□□ -1.83
SMARCC1-207ENST00000485833 CLEC4EQ9ULY5 219 aa3.59□□□□□ -1.83
SMARCC1-207ENST00000485833 U3KQA8 63 aa3.59□□□□□ -1.83
SMARCC1-207ENST00000485833 MYH11P35749 1972 aa3.59□□□□□ -1.83
SMARCC1-207ENST00000485833 TNRC6AQ8NDV7 1962 aaKnown RBP3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 ZNF840PA6NDX5 716 aa3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 K7EM74 188 aa3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 GALR3O60755 368 aaPredicted RBP3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 OLFM2O95897 454 aa3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 OAS1P00973 400 aaKnown RBP3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 IGKV3-15P01624 115 aa3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 IGLV3-19P01714 112 aa3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 KRTAP1-4P0C5Y4 121 aa3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 CISD3P0C7P0 127 aa3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 GIMD1P0DJR0 217 aa3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 MCF2P10911 925 aa3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 SELEP16581 610 aa3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 ACP1P24666 158 aa3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 GNA11P29992 359 aa3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 NAMPTP43490 491 aa3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 TUFMP49411 452 aaKnown RBP3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 ERVK-16P61578 105 aa3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 SLC7A9P82251 487 aa3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 MOXD1Q6UVY6 613 aa3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 ENPP7Q6UWV6 458 aa3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 ZNF584Q8IVC4 421 aa3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 BLIDQ8IZY5 108 aa3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 KCTD6Q8NC69 237 aa3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 ZNF564Q8TBZ8 553 aaPredicted RBP3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 C2orf40Q9H1Z8 148 aa3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 RIMS4Q9H426 269 aaPredicted RBP3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 DNAJC17Q9NVM6 304 aaKnown RBP3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 PKD2L2Q9NZM6 624 aa3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 CA5BQ9Y2D0 317 aa3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 STYXL1Q9Y6J8 313 aa3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 STAB1Q9NY15 2570 aa3.58□□□□□ -1.84
SMARCC1-207ENST00000485833 ATRQ13535 2644 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 IQCMA0A1B0GVH7 501 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 HMGB1P1B2RPK0 211 aaPredicted RBP3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 C10orf142B7Z368 130 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 NEDD8-MDP1E9PL57 170 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 PIRO00625 290 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 CYB561D2O14569 222 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 SLC16A4O15374 487 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 COCHO43405 550 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 GPRIN2O60269 458 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 CACNG3O60359 315 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 LRCH4O75427 683 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 HPP00738 406 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 FYNP06241 537 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 YES1P07947 543 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 KRT7P08729 469 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 ODC1P11926 461 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 GP9P14770 177 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 EPORP19235 508 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 GPR183P32249 361 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 MTCP1P56278 107 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 PEX3P56589 373 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 ERVPABLB-1P60509 514 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 MAP1AP78559 2803 aaPredicted RBP3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 NUCB1Q02818 461 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 PTPRJQ12913 1337 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 PDIA5Q14554 519 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 ISXQ2M1V0 245 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 TMEM215Q68D42 235 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 KRT80Q6KB66 452 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 ARMCX5Q6P1M9 558 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 TPGS1Q6ZTW0 290 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 PHLPP2Q6ZVD8 1323 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 TIPARPQ7Z3E1 657 aaKnown RBP3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 CEACAM19Q7Z692 300 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 AMIGO1Q86WK6 493 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 CATSPER3Q86XQ3 398 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 OR4N5Q8IXE1 308 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 ZC3H3Q8IXZ2 948 aaKnown RBP3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 SLC25A45Q8N413 288 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 PDCL2Q8N4E4 241 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 CCDC63Q8NA47 563 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 CCDC26Q8TAB7 109 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 SPPL2BQ8TCT7 592 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 SPPL2AQ8TCT8 520 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 PDCD6IPQ8WUM4 868 aaKnown RBP3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 EXT2Q93063 718 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 EXOC4Q96A65 974 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 SGF29Q96ES7 293 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 SIPA1Q96FS4 1042 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 NEDD4LQ96PU5 975 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 MTMR9Q96QG7 549 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 CCNL2Q96S94 520 aaPredicted RBP3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 ADNPQ9H2P0 1102 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 CHMP4BQ9H444 224 aaKnown RBP3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 FN3KQ9H479 309 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 JPT2Q9H910 190 aa3.57□□□□□ -1.84
SMARCC1-207ENST00000485833 DEC1Q9P2X7 70 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms