RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 SPRR3Q9UBC9 169 aa11.43□□□□□ -0.58
PTCD1-205ENST00000485746 DKKL1Q9UK85 242 aa11.43□□□□□ -0.58
PTCD1-205ENST00000485746 CAMK2AQ9UQM7 478 aa11.43□□□□□ -0.58
PTCD1-205ENST00000485746 SLC6A5Q9Y345 797 aa11.43□□□□□ -0.58
PTCD1-205ENST00000485746 WIF1Q9Y5W5 379 aa11.43□□□□□ -0.58
PTCD1-205ENST00000485746 GOLGA8QA0A0J9YX86 632 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 GOLGA8OA6NCC3 632 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 GOLGA8NF8WBI6 632 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 WDR1O75083 606 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 SNNO75324 88 aaPredicted RBP11.42□□□□□ -0.58
PTCD1-205ENST00000485746 UTS2O95399 124 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 PSMG1O95456 288 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 CPSF4O95639 269 aaKnown RBP11.42□□□□□ -0.58
PTCD1-205ENST00000485746 HPNP05981 417 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 KRT16P08779 473 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 HOXD4P09016 255 aaPredicted RBP11.42□□□□□ -0.58
PTCD1-205ENST00000485746 GABRA1P14867 456 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 HPGDP15428 266 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 TCEA1P23193 301 aaKnown RBP11.42□□□□□ -0.58
PTCD1-205ENST00000485746 ACVR2AP27037 513 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 PTPN6P29350 595 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 EVI2BP34910 448 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 PTGDSP41222 190 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 CLNS1AP54105 237 aaKnown RBP11.42□□□□□ -0.58
PTCD1-205ENST00000485746 POU6F2P78424 691 aaPredicted RBP11.42□□□□□ -0.58
PTCD1-205ENST00000485746 STX5Q13190 355 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 ART3Q13508 389 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 LASP1Q14847 261 aaKnown RBP11.42□□□□□ -0.58
PTCD1-205ENST00000485746 EIPR1Q53HC9 387 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 ANXA8L1Q5VT79 327 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 FNDC7Q5VTL7 733 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 SP5Q6BEB4 398 aaPredicted RBP11.42□□□□□ -0.58
PTCD1-205ENST00000485746 OR4F3Q6IEY1 312 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 MFSD12Q6NUT3 480 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 ZCCHC12Q6PEW1 402 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 BHLHB9Q6PI77 547 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 B3GNT6Q6ZMB0 384 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 RIMKLAQ8IXN7 391 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 FAM83FQ8NEG4 500 aaPredicted RBP11.42□□□□□ -0.58
PTCD1-205ENST00000485746 OR4A15Q8NGL6 344 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 ADAMTS15Q8TE58 950 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 ASB5Q8WWX0 329 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 ABTB1Q969K4 478 aaPredicted RBP11.42□□□□□ -0.58
PTCD1-205ENST00000485746 MOAP1Q96BY2 351 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 FAM120BQ96EK7 910 aaKnown RBP11.42□□□□□ -0.58
PTCD1-205ENST00000485746 OTUB1Q96FW1 271 aaPredicted RBP11.42□□□□□ -0.58
PTCD1-205ENST00000485746 C16orf58Q96GQ5 468 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 DMRTA2Q96SC8 542 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 ZBTB18Q99592 522 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 WDR55Q9H6Y2 383 aaPredicted RBP11.42□□□□□ -0.58
PTCD1-205ENST00000485746 NEUROD4Q9HD90 331 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 NTMQ9P121 344 aa11.42□□□□□ -0.58
PTCD1-205ENST00000485746 SPENQ96T58 3664 aaKnown RBP11.41□□□□□ -0.58
PTCD1-205ENST00000485746 HMGB1P1B2RPK0 211 aaPredicted RBP11.41□□□□□ -0.58
PTCD1-205ENST00000485746 SDHDO14521 159 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 ADAM10O14672 748 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 NKX2-2O95096 273 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 CLDN14O95500 239 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 HMGN2P05204 90 aaKnown RBP11.41□□□□□ -0.58
PTCD1-205ENST00000485746 ACP2P11117 423 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 AGAP20933 346 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 ATP6V1C1P21283 382 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 HTR1EP28566 365 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 EPHA3P29320 983 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 S100A3P33764 101 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 KIR3DL1P43629 444 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 C21orf58P58505 322 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 SF3B4Q15427 424 aaKnown RBP eCLIP11.41□□□□□ -0.58
PTCD1-205ENST00000485746 EMC4Q5J8M3 183 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 C1orf185Q5T7R7 199 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 FIGNL1Q6PIW4 674 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 GALNT10Q86SR1 603 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 MARCH3Q86UD3 253 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 PM20D2Q8IYS1 436 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 LRRC34Q8IZ02 419 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 WDSUB1Q8N9V3 476 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 SLC16A11Q8NCK7 471 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 OR5AK3PQ8NH89 298 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 SFXN5Q8TD22 340 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 ACTRT3Q9BYD9 372 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 ACBD3Q9H3P7 528 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 DSN1Q9H410 356 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 CXorf36Q9H7Y0 433 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 SIRT3Q9NTG7 399 aaPredicted RBP11.41□□□□□ -0.58
PTCD1-205ENST00000485746 TAS2R10Q9NYW0 307 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 ABCG2Q9UNQ0 655 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 PCDHGB3Q9Y5G1 929 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 HRH3Q9Y5N1 445 aa11.41□□□□□ -0.58
PTCD1-205ENST00000485746 PRRC2CQ9Y520 2896 aaKnown RBP11.41□□□□□ -0.58
PTCD1-205ENST00000485746 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.4□□□□□ -0.58
PTCD1-205ENST00000485746 AHRRA9YTQ3 701 aa11.4□□□□□ -0.58
PTCD1-205ENST00000485746 RNASET2O00584 256 aaKnown RBP11.4□□□□□ -0.58
PTCD1-205ENST00000485746 GMFGO60234 142 aa11.4□□□□□ -0.58
PTCD1-205ENST00000485746 DIAPH2O60879 1101 aa11.4□□□□□ -0.58
PTCD1-205ENST00000485746 SOX30O94993 753 aa11.4□□□□□ -0.58
PTCD1-205ENST00000485746 KCNK2O95069 426 aa11.4□□□□□ -0.58
PTCD1-205ENST00000485746 H2AFXP16104 143 aaPredicted RBP11.4□□□□□ -0.58
PTCD1-205ENST00000485746 ENDOUP21128 410 aaKnown RBP11.4□□□□□ -0.58
PTCD1-205ENST00000485746 DPP4P27487 766 aa11.4□□□□□ -0.58
PTCD1-205ENST00000485746 SRD5A2P31213 254 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms