RNA–Protein interactions for RNA: ENST00000479596.5

CCNL1-222, Transcript of cyclin L1, human

TSL 3

Gene CCNL1, Length 883 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-222	ENST00000479596	SH3GL2	Q99962	352 aa		13.65	□□□□□ -0.22
CCNL1-222	ENST00000479596	G6PC3	Q9BUM1	346 aa		13.65	□□□□□ -0.22
CCNL1-222	ENST00000479596	TAS2R10	Q9NYW0	307 aa		13.65	□□□□□ -0.22
CCNL1-222	ENST00000479596	CBLC	Q9ULV8	474 aa		13.65	□□□□□ -0.22
CCNL1-222	ENST00000479596	TMED5	Q9Y3A6	229 aa		13.65	□□□□□ -0.22
CCNL1-222	ENST00000479596	L3MBTL1	Q9Y468	752 aa		13.65	□□□□□ -0.22
CCNL1-222	ENST00000479596	HRNR	Q86YZ3	2850 aa	Predicted RBP	13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	MBD3L4	A6NDZ8	208 aa	Predicted RBP	13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	MBD3L3	A6NE82	208 aa	Predicted RBP	13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	MBD3L5	A6NJ08	208 aa	Predicted RBP	13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	ZNF500	O60304	480 aa	Predicted RBP	13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	ZIC3	O60481	467 aa		13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	IL33	O95760	270 aa		13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	CHEK2	O96017	543 aa		13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	IGKV1D-16	P01601	117 aa		13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	BPGM	P07738	259 aa		13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	BCKDHA	P12694	445 aa		13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	BMP5	P22003	454 aa		13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	LHX2	P50458	406 aa		13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	B3GALT5-AS1	P59052	145 aa		13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	TRIM42	Q8IWZ5	723 aa		13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	FADS6	Q8N9I5	356 aa		13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	C9orf106	Q8NAJ2	232 aa		13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	ZPLD1	Q8TCW7	415 aa		13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	AGR3	Q8TD06	166 aa		13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	PPCDC	Q96CD2	204 aa		13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	GIMAP5	Q96F15	307 aa		13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	C3orf30	Q96M34	536 aa		13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	TUBA1C	Q9BQE3	449 aa		13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	NTM	Q9P121	344 aa		13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	KCNN3	Q9UGI6	736 aa		13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	ZDHHC2	Q9UIJ5	367 aa		13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	ANKRD17	O75179	2603 aa	Known RBP	13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	ANKHD1	Q8IWZ3	2542 aa	Known RBP	13.64	□□□□□ -0.23
CCNL1-222	ENST00000479596	GXYLT2	A0PJZ3	443 aa		13.63	□□□□□ -0.23
CCNL1-222	ENST00000479596	SCO2	O43819	266 aa		13.63	□□□□□ -0.23
CCNL1-222	ENST00000479596	SERPINB5	P36952	375 aa		13.63	□□□□□ -0.23
CCNL1-222	ENST00000479596	STAR	P49675	285 aa		13.63	□□□□□ -0.23
CCNL1-222	ENST00000479596	CLDN18	P56856	261 aa		13.63	□□□□□ -0.23
CCNL1-222	ENST00000479596	MRPS22	P82650	360 aa	Known RBP	13.63	□□□□□ -0.23
CCNL1-222	ENST00000479596	ZNF844	Q08AG5	666 aa		13.63	□□□□□ -0.23
CCNL1-222	ENST00000479596	SNTB1	Q13884	538 aa	Known RBP	13.63	□□□□□ -0.23
CCNL1-222	ENST00000479596	DECR1	Q16698	335 aa		13.63	□□□□□ -0.23
CCNL1-222	ENST00000479596	PLXDC2	Q6UX71	529 aa		13.63	□□□□□ -0.23
CCNL1-222	ENST00000479596	IFNE	Q86WN2	208 aa		13.63	□□□□□ -0.23
CCNL1-222	ENST00000479596	OR2M3	Q8NG83	312 aa		13.63	□□□□□ -0.23
CCNL1-222	ENST00000479596	PIK3R3	Q92569	461 aa		13.63	□□□□□ -0.23
CCNL1-222	ENST00000479596	PARD6B	Q9BYG5	372 aa		13.63	□□□□□ -0.23
CCNL1-222	ENST00000479596	CALHM2	Q9HA72	323 aa		13.63	□□□□□ -0.23
CCNL1-222	ENST00000479596	EML4	Q9HC35	981 aa	Known RBP	13.63	□□□□□ -0.23
CCNL1-222	ENST00000479596		Q9N2J8	555 aa		13.63	□□□□□ -0.23
CCNL1-222	ENST00000479596	EQTN	Q9NQ60	294 aa		13.63	□□□□□ -0.23
CCNL1-222	ENST00000479596	ZNF629	Q9UEG4	869 aa	Predicted RBP	13.63	□□□□□ -0.23
CCNL1-222	ENST00000479596	ABCG2	Q9UNQ0	655 aa		13.63	□□□□□ -0.23
CCNL1-222	ENST00000479596	MRPS18C	Q9Y3D5	142 aa	Known RBP	13.63	□□□□□ -0.23
CCNL1-222	ENST00000479596	TEP1	Q99973	2627 aa	Known RBP	13.63	□□□□□ -0.23
CCNL1-222	ENST00000479596	SYT5	O00445	386 aa		13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	DVL2	O14641	736 aa		13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	NKX2-2	O95096	273 aa		13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	IL2RA	P01589	272 aa		13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	PRPS2	P11908	318 aa		13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	ZNF708	P17019	499 aa		13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	CAPN3	P20807	821 aa		13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	EFNA1	P20827	205 aa	Predicted RBP	13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	TCEA1	P23193	301 aa	Known RBP	13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	DPP4	P27487	766 aa		13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	ASCL1	P50553	236 aa		13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	SF3B4	Q15427	424 aa	Known RBP eCLIP	13.62	□□□□□ -0.23	1e-14	■■■■■ 48.8
CCNL1-222	ENST00000479596	FBXL19-AS1	Q494R0	122 aa		13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	EXOSC6	Q5RKV6	272 aa	Known RBP	13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	ARSK	Q6UWY0	536 aa		13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	APOOL	Q6UXV4	268 aa		13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	NUDT8	Q8WV74	236 aa		13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	MTERF3	Q96E29	417 aa		13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	ZBED6CL	Q96FA7	236 aa	Predicted RBP	13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	PKNOX2	Q96KN3	472 aa		13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	SFXN2	Q96NB2	322 aa		13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	UCN2	Q96RP3	112 aa		13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	DSN1	Q9H410	356 aa		13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	SIRT3	Q9NTG7	399 aa	Predicted RBP	13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	ACSS1	Q9NUB1	689 aa	Predicted RBP	13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	FAM120C	Q9NX05	1096 aa	Known RBP	13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	SH3BP4	Q9P0V3	963 aa		13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	PPP4R1L	Q9P1A2	415 aa		13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	CLCF1	Q9UBD9	225 aa		13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	ATP6V1H	Q9UI12	483 aa		13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	DKKL1	Q9UK85	242 aa		13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	RPH3A	Q9Y2J0	694 aa	Predicted RBP	13.62	□□□□□ -0.23
CCNL1-222	ENST00000479596	CLCA1	A8K7I4	914 aa		13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596		H0Y3Z8	333 aa		13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	SCAMP2	O15127	329 aa	Known RBP	13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	PEX11A	O75192	247 aa		13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	SKAP2	O75563	359 aa	Predicted RBP	13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	LYPLA1	O75608	230 aa	Predicted RBP	13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	ACP2	P11117	423 aa		13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	CHM	P24386	653 aa		13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	GABRA3	P34903	492 aa		13.61	□□□□□ -0.23
CCNL1-222	ENST00000479596	GPC1	P35052	558 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms