RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 PCDHGB3Q9Y5G1 929 aa14.12□□□□□ -0.15
SEC13-215ENST00000477547 TEX15Q9BXT5 2789 aa14.11□□□□□ -0.15
SEC13-215ENST00000477547 HMGN4O00479 90 aa14.11□□□□□ -0.15
SEC13-215ENST00000477547 REM1O75628 298 aa14.11□□□□□ -0.15
SEC13-215ENST00000477547 AK1P00568 194 aa14.11□□□□□ -0.15
SEC13-215ENST00000477547 CYB561P49447 251 aa14.11□□□□□ -0.15
SEC13-215ENST00000477547 HPCAP84074 193 aa14.11□□□□□ -0.15
SEC13-215ENST00000477547 RGNQ15493 299 aa14.11□□□□□ -0.15
SEC13-215ENST00000477547 LACTB2Q53H82 288 aaPredicted RBP14.11□□□□□ -0.15
SEC13-215ENST00000477547 RABL3Q5HYI8 236 aa14.11□□□□□ -0.15
SEC13-215ENST00000477547 DCST2Q5T1A1 773 aa14.11□□□□□ -0.15
SEC13-215ENST00000477547 GCNT6Q5T4J0 391 aa14.11□□□□□ -0.15
SEC13-215ENST00000477547 CCNJQ5T5M9 372 aa14.11□□□□□ -0.15
SEC13-215ENST00000477547 FIGNL1Q6PIW4 674 aa14.11□□□□□ -0.15
SEC13-215ENST00000477547 IGFL2Q6UWQ7 119 aa14.11□□□□□ -0.15
SEC13-215ENST00000477547 IL20RBQ6UXL0 311 aa14.11□□□□□ -0.15
SEC13-215ENST00000477547 GALNT10Q86SR1 603 aa14.11□□□□□ -0.15
SEC13-215ENST00000477547 DND1Q8IYX4 353 aaKnown RBP14.11□□□□□ -0.15
SEC13-215ENST00000477547 BCORP1Q8N888 145 aa14.11□□□□□ -0.15
SEC13-215ENST00000477547 OR8J3Q8NGG0 315 aa14.11□□□□□ -0.15
SEC13-215ENST00000477547 OR5M3Q8NGP4 307 aa14.11□□□□□ -0.15
SEC13-215ENST00000477547 SLC35A4Q96G79 324 aa14.11□□□□□ -0.15
SEC13-215ENST00000477547 THUMPD3Q9BV44 507 aaKnown RBP14.11□□□□□ -0.15
SEC13-215ENST00000477547 P2RX2Q9UBL9 471 aa14.11□□□□□ -0.15
SEC13-215ENST00000477547 MRTO4Q9UKD2 239 aaKnown RBP14.11□□□□□ -0.15
SEC13-215ENST00000477547 GMEB1Q9Y692 573 aa14.11□□□□□ -0.15
SEC13-215ENST00000477547 KCNE3Q9Y6H6 103 aa14.11□□□□□ -0.15
SEC13-215ENST00000477547 CCT8L1PA6NM43 557 aa14.1□□□□□ -0.15
SEC13-215ENST00000477547 K7EM74 188 aa14.1□□□□□ -0.15
SEC13-215ENST00000477547 SOX30O94993 753 aa14.1□□□□□ -0.15
SEC13-215ENST00000477547 KCNK2O95069 426 aa14.1□□□□□ -0.15
SEC13-215ENST00000477547 CALB2P22676 271 aa14.1□□□□□ -0.15
SEC13-215ENST00000477547 SLC6A2P23975 617 aa14.1□□□□□ -0.15
SEC13-215ENST00000477547 CD96P40200 585 aa14.1□□□□□ -0.15
SEC13-215ENST00000477547 CD97P48960 835 aa14.1□□□□□ -0.15
SEC13-215ENST00000477547 MNAT1P51948 309 aa14.1□□□□□ -0.15
SEC13-215ENST00000477547 PSMD4P55036 377 aaKnown RBP14.1□□□□□ -0.15
SEC13-215ENST00000477547 FBXW4P57775 412 aa14.1□□□□□ -0.15
SEC13-215ENST00000477547 FUT5Q11128 374 aa14.1□□□□□ -0.15
SEC13-215ENST00000477547 OR1C1Q15619 314 aa14.1□□□□□ -0.15
SEC13-215ENST00000477547 NTRK2Q16620 822 aa14.1□□□□□ -0.15
SEC13-215ENST00000477547 CYP51A1Q16850 503 aa14.1□□□□□ -0.15
SEC13-215ENST00000477547 ZNF791Q3KP31 576 aaPredicted RBP14.1□□□□□ -0.15
SEC13-215ENST00000477547 NANOGP8Q6NSW7 305 aa14.1□□□□□ -0.15
SEC13-215ENST00000477547 RTL4Q6ZR62 310 aa14.1□□□□□ -0.15
SEC13-215ENST00000477547 ASB18Q6ZVZ8 466 aa14.1□□□□□ -0.15
SEC13-215ENST00000477547 C10orf111Q8N326 155 aa14.1□□□□□ -0.15
SEC13-215ENST00000477547 ZADH2Q8N4Q0 377 aa14.1□□□□□ -0.15
SEC13-215ENST00000477547 OR10G3Q8NGC4 313 aa14.1□□□□□ -0.15
SEC13-215ENST00000477547 XAGE5Q8WWM1 108 aa14.1□□□□□ -0.15
SEC13-215ENST00000477547 NSL1Q96IY1 281 aa14.1□□□□□ -0.15
SEC13-215ENST00000477547 COL21A1Q96P44 957 aa14.1□□□□□ -0.15
SEC13-215ENST00000477547 ADOQ96SZ5 270 aa14.1□□□□□ -0.15
SEC13-215ENST00000477547 SH3GL1Q99961 368 aa14.1□□□□□ -0.15
SEC13-215ENST00000477547 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.1□□□□□ -0.15
SEC13-215ENST00000477547 NANOGQ9H9S0 305 aa14.1□□□□□ -0.15
SEC13-215ENST00000477547 LRFN1Q9P244 771 aa14.1□□□□□ -0.15
SEC13-215ENST00000477547 CSAG2Q9Y5P2 127 aa14.1□□□□□ -0.15
SEC13-215ENST00000477547 NINQ8N4C6 2090 aa14.1□□□□□ -0.15
SEC13-215ENST00000477547 OR6C70A6NIJ9 312 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 CDK2AP1O14519 115 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 SUV39H1O43463 412 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 HS6ST1O60243 411 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 TSPAN2O60636 221 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 DPM1O60762 260 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 ABCB7O75027 752 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 UGT2B11O75310 529 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 IL33O95760 270 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 IGKV1D-16P01601 117 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 BCHEP06276 602 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 NUDT7P0C024 238 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 BMP2P12643 396 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 NAGAP17050 411 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 GPX2P18283 190 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 ATP6V1C1P21283 382 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 SLC7A2P52569 658 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 EFR3AQ14156 821 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.09□□□□□ -0.15
SEC13-215ENST00000477547 GPAT3Q53EU6 434 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 HEPHL1Q6MZM0 1159 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 C8orf82Q6P1X6 216 aaPredicted RBP14.09□□□□□ -0.15
SEC13-215ENST00000477547 IGFL3Q6UXB1 125 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 HPS6Q86YV9 775 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 MDS2Q8NDY4 140 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 CHDHQ8NE62 594 aaPredicted RBP14.09□□□□□ -0.15
SEC13-215ENST00000477547 FBXO27Q8NI29 283 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 DIO2Q92813 273 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 TMEM125Q96AQ2 219 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 C5orf34Q96MH7 638 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 SIGLEC12Q96PQ1 595 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 GPATCH1Q9BRR8 931 aaKnown RBP14.09□□□□□ -0.15
SEC13-215ENST00000477547 G6PC3Q9BUM1 346 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 TRIM45Q9H8W5 580 aaPredicted RBP14.09□□□□□ -0.15
SEC13-215ENST00000477547 ZNF71Q9NQZ8 489 aaPredicted RBP14.09□□□□□ -0.15
SEC13-215ENST00000477547 THUMPD1Q9NXG2 353 aaKnown RBP14.09□□□□□ -0.15
SEC13-215ENST00000477547 NDE1Q9NXR1 346 aa14.09□□□□□ -0.15
SEC13-215ENST00000477547 TMEM247A6NEH6 219 aa14.08□□□□□ -0.16
SEC13-215ENST00000477547 TP53I11O14683 189 aa14.08□□□□□ -0.16
SEC13-215ENST00000477547 ICOSLGO75144 302 aa14.08□□□□□ -0.16
SEC13-215ENST00000477547 TNFRSF21O75509 655 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms