RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 ZFHX3Q15911 3703 aa9.8□□□□□ -0.84
SEC13-214ENST00000476597 NF1P21359 2839 aa9.8□□□□□ -0.84
SEC13-214ENST00000476597 ITPR3Q14573 2671 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 FAM221AA4D161 298 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 TTC36A6NLP5 189 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 C17orf51A8MQB3 221 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 NPHS1O60500 1241 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 CTAG2O75638 210 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 RCBTB2O95199 551 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 ZWINTO95229 277 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 IL33O95760 270 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 CHEK2O96017 543 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 LINC00032P0C843 101 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 PRPS2P11908 318 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 NEFHP12036 1026 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 SDC1P18827 310 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 DPP4P27487 766 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 EVI2BP34910 448 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 MAP3K8P41279 467 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 FRKP42685 505 aaPredicted RBP9.79□□□□□ -0.84
SEC13-214ENST00000476597 LHX2P50458 406 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 AGFG1P52594 562 aaKnown RBP9.79□□□□□ -0.84
SEC13-214ENST00000476597 DSCR4P56555 118 aaPredicted RBP9.79□□□□□ -0.84
SEC13-214ENST00000476597 CLDN18P56856 261 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 B3GALT5-AS1P59052 145 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 SRYQ05066 204 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 SNTB1Q13884 538 aaKnown RBP9.79□□□□□ -0.84
SEC13-214ENST00000476597 ZNHIT3Q15649 155 aaPredicted RBP9.79□□□□□ -0.84
SEC13-214ENST00000476597 BCL2A1Q16548 175 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 ARL13AQ5H913 290 aaPredicted RBP9.79□□□□□ -0.84
SEC13-214ENST00000476597 ZNF551Q7Z340 670 aaPredicted RBP9.79□□□□□ -0.84
SEC13-214ENST00000476597 ZZZ3Q8IYH5 903 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 FADS6Q8N9I5 356 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 DUSP19Q8WTR2 217 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 HOXB13Q92826 284 aaPredicted RBP9.79□□□□□ -0.84
SEC13-214ENST00000476597 WNT2BQ93097 391 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 SFXN2Q96NB2 322 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 FAM111AQ96PZ2 611 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 CCT7Q99832 543 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 IQCGQ9H095 443 aaKnown RBP9.79□□□□□ -0.84
SEC13-214ENST00000476597 DSN1Q9H410 356 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 REEP4Q9H6H4 257 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 C3orf14Q9HBI5 128 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 Q9N2J8 555 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 FLRT3Q9NZU0 649 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 CRIM1Q9NZV1 1036 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 NTMQ9P121 344 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 BAIAP2L1Q9UHR4 511 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 MRTO4Q9UKD2 239 aaKnown RBP9.79□□□□□ -0.84
SEC13-214ENST00000476597 FIS1Q9Y3D6 152 aa9.79□□□□□ -0.84
SEC13-214ENST00000476597 HRNRQ86YZ3 2850 aaPredicted RBP9.78□□□□□ -0.84
SEC13-214ENST00000476597 CLCA1A8K7I4 914 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 H0Y3Z8 333 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 LSM1O15116 133 aaKnown RBP9.78□□□□□ -0.84
SEC13-214ENST00000476597 PDPK1O15530 556 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 AKAP10O43572 662 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 SPAG7O75391 227 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 NKX2-2O95096 273 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 CHRNGP07510 517 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 TMIGD3P0DMS9 266 aaPredicted RBP9.78□□□□□ -0.84
SEC13-214ENST00000476597 ZNF708P17019 499 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 GABRA3P34903 492 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 PSMD4P55036 377 aaKnown RBP9.78□□□□□ -0.84
SEC13-214ENST00000476597 RPL38P63173 70 aaKnown RBP9.78□□□□□ -0.84
SEC13-214ENST00000476597 FOXF2Q12947 444 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 PDE7AQ13946 482 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 ZNF385BQ569K4 471 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 ANKRD26P1Q6NSI1 321 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 SPNS3Q6ZMD2 512 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 TMEM200AQ86VY9 491 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 OR2M3Q8NG83 312 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 OR4K17Q8NGC6 315 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 CEP70Q8NHQ1 597 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 TCP10LQ8TDR4 215 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 AENQ8WTP8 325 aaKnown RBP9.78□□□□□ -0.84
SEC13-214ENST00000476597 FAM222BQ8WU58 562 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 TWIST2Q8WVJ9 160 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 CIDECQ96AQ7 238 aaPredicted RBP9.78□□□□□ -0.84
SEC13-214ENST00000476597 PPCDCQ96CD2 204 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 ZFP3Q96NJ6 502 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 TSSK3Q96PN8 268 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 TM9SF2Q99805 663 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 MECRQ9BV79 373 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 RTN4RQ9BZR6 473 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 EML4Q9HC35 981 aaKnown RBP9.78□□□□□ -0.84
SEC13-214ENST00000476597 SDHAF3Q9NRP4 125 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 ACSS1Q9NUB1 689 aaPredicted RBP9.78□□□□□ -0.84
SEC13-214ENST00000476597 FAM120CQ9NX05 1096 aaKnown RBP9.78□□□□□ -0.84
SEC13-214ENST00000476597 MED11Q9P086 117 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 SH3BP4Q9P0V3 963 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 PPP4R1LQ9P1A2 415 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 SLC17A7Q9P2U7 560 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 DKKL1Q9UK85 242 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 ABCG2Q9UNQ0 655 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 RPH3AQ9Y2J0 694 aaPredicted RBP9.78□□□□□ -0.84
SEC13-214ENST00000476597 NCKAP5O14513 1909 aa9.78□□□□□ -0.84
SEC13-214ENST00000476597 VPS13CQ709C8 3753 aa9.77□□□□□ -0.84
SEC13-214ENST00000476597 HCFC1P51610 2035 aa9.77□□□□□ -0.85
SEC13-214ENST00000476597 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.77□□□□□ -0.85
SEC13-214ENST00000476597 GXYLT2A0PJZ3 443 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms