RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 ZBP1Q9H171 429 aa4.66□□□□□ -1.66
VPS50-212ENST00000476413 RIBC2Q9H4K1 309 aa4.66□□□□□ -1.66
VPS50-212ENST00000476413 PALMDQ9NP74 551 aa4.66□□□□□ -1.66
VPS50-212ENST00000476413 UTP6Q9NYH9 597 aaKnown RBP4.66□□□□□ -1.66
VPS50-212ENST00000476413 RAI14Q9P0K7 980 aa4.66□□□□□ -1.66
VPS50-212ENST00000476413 RNF6Q9Y252 685 aa4.66□□□□□ -1.66
VPS50-212ENST00000476413 C11orf98E9PRG8 122 aa4.65□□□□□ -1.67
VPS50-212ENST00000476413 CTAGE5O15320 804 aa4.65□□□□□ -1.67
VPS50-212ENST00000476413 JAK2O60674 1132 aa4.65□□□□□ -1.67
VPS50-212ENST00000476413 JCHAINP01591 159 aa4.65□□□□□ -1.67
VPS50-212ENST00000476413 PVRP15151 417 aa4.65□□□□□ -1.67
VPS50-212ENST00000476413 BCL3P20749 454 aa4.65□□□□□ -1.67
VPS50-212ENST00000476413 PAX7P23759 505 aa4.65□□□□□ -1.67
VPS50-212ENST00000476413 CNTN2Q02246 1040 aa4.65□□□□□ -1.67
VPS50-212ENST00000476413 SNTB2Q13425 540 aaKnown RBP4.65□□□□□ -1.67
VPS50-212ENST00000476413 LPAL2Q16609 132 aa4.65□□□□□ -1.67
VPS50-212ENST00000476413 STAC2Q6ZMT1 411 aa4.65□□□□□ -1.67
VPS50-212ENST00000476413 CENPUQ71F23 418 aa4.65□□□□□ -1.67
VPS50-212ENST00000476413 ZNF671Q8TAW3 534 aa4.65□□□□□ -1.67
VPS50-212ENST00000476413 RASL10AQ92737 203 aa4.65□□□□□ -1.67
VPS50-212ENST00000476413 OSTF1Q92882 214 aa4.65□□□□□ -1.67
VPS50-212ENST00000476413 DHTKD1Q96HY7 919 aaPredicted RBP4.65□□□□□ -1.67
VPS50-212ENST00000476413 ERP44Q9BS26 406 aa4.65□□□□□ -1.67
VPS50-212ENST00000476413 TMEM121Q9BTD3 319 aa4.65□□□□□ -1.67
VPS50-212ENST00000476413 DHRS4-AS1Q9P1J3 65 aa4.65□□□□□ -1.67
VPS50-212ENST00000476413 ARMCX1Q9P291 453 aa4.65□□□□□ -1.67
VPS50-212ENST00000476413 TRBV7-9A0A0J9YWB2 115 aa4.64□□□□□ -1.67
VPS50-212ENST00000476413 PHF1O43189 567 aaPredicted RBP4.64□□□□□ -1.67
VPS50-212ENST00000476413 PPIHO43447 177 aaKnown RBP4.64□□□□□ -1.67
VPS50-212ENST00000476413 DUX1O43812 170 aa4.64□□□□□ -1.67
VPS50-212ENST00000476413 EFNA2O43921 213 aa4.64□□□□□ -1.67
VPS50-212ENST00000476413 RAMP1O60894 148 aa4.64□□□□□ -1.67
VPS50-212ENST00000476413 ZNF253O75346 499 aa4.64□□□□□ -1.67
VPS50-212ENST00000476413 IDH1O75874 414 aaKnown RBP4.64□□□□□ -1.67
VPS50-212ENST00000476413 NEBLO76041 1014 aa4.64□□□□□ -1.67
VPS50-212ENST00000476413 UFL1O94874 794 aa4.64□□□□□ -1.67
VPS50-212ENST00000476413 ANXA3P12429 323 aa4.64□□□□□ -1.67
VPS50-212ENST00000476413 HNRNPA2B1P22626 353 aaKnown RBP4.64□□□□□ -1.67
VPS50-212ENST00000476413 SHC1P29353 583 aa4.64□□□□□ -1.67
VPS50-212ENST00000476413 HMGCLP35914 325 aa4.64□□□□□ -1.67
VPS50-212ENST00000476413 RPL4P36578 427 aaKnown RBP4.64□□□□□ -1.67
VPS50-212ENST00000476413 OR1D4P47884 311 aa4.64□□□□□ -1.67
VPS50-212ENST00000476413 COX10Q12887 443 aa4.64□□□□□ -1.67
VPS50-212ENST00000476413 NADK2Q4G0N4 442 aa4.64□□□□□ -1.67
VPS50-212ENST00000476413 CYS1Q717R9 158 aa4.64□□□□□ -1.67
VPS50-212ENST00000476413 POM121L12Q8N7R1 296 aa4.64□□□□□ -1.67
VPS50-212ENST00000476413 RFESDQ8TAC1 157 aa4.64□□□□□ -1.67
VPS50-212ENST00000476413 THRSPQ92748 146 aa4.64□□□□□ -1.67
VPS50-212ENST00000476413 RBM18Q96H35 190 aaKnown RBP4.64□□□□□ -1.67
VPS50-212ENST00000476413 VPS39Q96JC1 886 aa4.64□□□□□ -1.67
VPS50-212ENST00000476413 ELMO2Q96JJ3 720 aa4.64□□□□□ -1.67
VPS50-212ENST00000476413 COMMD4Q9H0A8 199 aa4.64□□□□□ -1.67
VPS50-212ENST00000476413 RHOJQ9H4E5 214 aa4.64□□□□□ -1.67
VPS50-212ENST00000476413 MEAF6Q9HAF1 191 aa4.64□□□□□ -1.67
VPS50-212ENST00000476413 FAM120CQ9NX05 1096 aaKnown RBP4.64□□□□□ -1.67
VPS50-212ENST00000476413 DUSP12Q9UNI6 340 aa4.64□□□□□ -1.67
VPS50-212ENST00000476413 EIF3LQ9Y262 564 aaKnown RBP4.64□□□□□ -1.67
VPS50-212ENST00000476413 CARMIL1Q5VZK9 1371 aa4.64□□□□□ -1.67
VPS50-212ENST00000476413 TRABD2BA6NFA1 517 aa4.63□□□□□ -1.67
VPS50-212ENST00000476413 ZSCAN5BA6NJL1 495 aa4.63□□□□□ -1.67
VPS50-212ENST00000476413 CASKO14936 926 aa4.63□□□□□ -1.67
VPS50-212ENST00000476413 LRRTM2O43300 516 aa4.63□□□□□ -1.67
VPS50-212ENST00000476413 MFN2O95140 757 aa4.63□□□□□ -1.67
VPS50-212ENST00000476413 GAS8-AS1O95177 125 aa4.63□□□□□ -1.67
VPS50-212ENST00000476413 CGAP01215 116 aa4.63□□□□□ -1.67
VPS50-212ENST00000476413 OPN1LWP04000 364 aa4.63□□□□□ -1.67
VPS50-212ENST00000476413 CALRP27797 417 aaKnown RBP4.63□□□□□ -1.67
VPS50-212ENST00000476413 CA8P35219 290 aa4.63□□□□□ -1.67
VPS50-212ENST00000476413 ARFIP1P53367 373 aa4.63□□□□□ -1.67
VPS50-212ENST00000476413 KRTAP10-9P60411 292 aa4.63□□□□□ -1.67
VPS50-212ENST00000476413 ZFP36L1Q07352 338 aaKnown RBP4.63□□□□□ -1.67
VPS50-212ENST00000476413 CHI3L2Q15782 390 aa4.63□□□□□ -1.67
VPS50-212ENST00000476413 ANKDD1AQ495B1 522 aa4.63□□□□□ -1.67
VPS50-212ENST00000476413 SLC36A3Q495N2 470 aa4.63□□□□□ -1.67
VPS50-212ENST00000476413 ZNF772Q68DY9 489 aaPredicted RBP4.63□□□□□ -1.67
VPS50-212ENST00000476413 STXBP4Q6ZWJ1 553 aa4.63□□□□□ -1.67
VPS50-212ENST00000476413 ZDHHC21Q8IVQ6 265 aa4.63□□□□□ -1.67
VPS50-212ENST00000476413 SLC22A18ASQ8N1D0 253 aa4.63□□□□□ -1.67
VPS50-212ENST00000476413 TBCKQ8TEA7 893 aa4.63□□□□□ -1.67
VPS50-212ENST00000476413 C18orf25Q96B23 403 aaPredicted RBP4.63□□□□□ -1.67
VPS50-212ENST00000476413 C9orf85Q96MD7 179 aa4.63□□□□□ -1.67
VPS50-212ENST00000476413 RANBP9Q96S59 729 aa4.63□□□□□ -1.67
VPS50-212ENST00000476413 DHX33Q9H6R0 707 aaKnown RBP4.63□□□□□ -1.67
VPS50-212ENST00000476413 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.63□□□□□ -1.67
VPS50-212ENST00000476413 ZNF581Q9P0T4 197 aa4.63□□□□□ -1.67
VPS50-212ENST00000476413 BARX2Q9UMQ3 279 aaPredicted RBP4.63□□□□□ -1.67
VPS50-212ENST00000476413 NTNG1Q9Y2I2 539 aa4.63□□□□□ -1.67
VPS50-212ENST00000476413 TRAV9-2A0A087WT02 112 aa4.62□□□□□ -1.67
VPS50-212ENST00000476413 ZNF840PA6NDX5 716 aa4.62□□□□□ -1.67
VPS50-212ENST00000476413 SAP18O00422 153 aaKnown RBP4.62□□□□□ -1.67
VPS50-212ENST00000476413 XPO1O14980 1071 aaKnown RBP4.62□□□□□ -1.67
VPS50-212ENST00000476413 CRLF1O75462 422 aa4.62□□□□□ -1.67
VPS50-212ENST00000476413 KBTBD11O94819 623 aa4.62□□□□□ -1.67
VPS50-212ENST00000476413 CSF2P04141 144 aa4.62□□□□□ -1.67
VPS50-212ENST00000476413 IGFBP1P08833 259 aaPredicted RBP4.62□□□□□ -1.67
VPS50-212ENST00000476413 IQCF3P0C7M6 154 aa4.62□□□□□ -1.67
VPS50-212ENST00000476413 CLUP10909 449 aa4.62□□□□□ -1.67
VPS50-212ENST00000476413 ELK3P41970 407 aa4.62□□□□□ -1.67
VPS50-212ENST00000476413 METAP1P53582 386 aa4.62□□□□□ -1.67
VPS50-212ENST00000476413 DPYSL3Q14195 570 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms