RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 SNX6Q9UNH7 406 aa4.53□□□□□ -1.68
SMC5-203ENST00000475540 PLA2G4CQ9UP65 541 aa4.53□□□□□ -1.68
SMC5-203ENST00000475540 MRPS2Q9Y399 296 aaKnown RBP4.53□□□□□ -1.68
SMC5-203ENST00000475540 IGHV3-35A0A0C4DH35 117 aa4.52□□□□□ -1.69
SMC5-203ENST00000475540 SLC28A1O00337 649 aa4.52□□□□□ -1.69
SMC5-203ENST00000475540 SPAG6O75602 509 aa4.52□□□□□ -1.69
SMC5-203ENST00000475540 OAS1P00973 400 aaKnown RBP4.52□□□□□ -1.69
SMC5-203ENST00000475540 PCCBP05166 539 aa4.52□□□□□ -1.69
SMC5-203ENST00000475540 SERPINF2P08697 491 aa4.52□□□□□ -1.69
SMC5-203ENST00000475540 SLC35E2P0CK97 266 aa4.52□□□□□ -1.69
SMC5-203ENST00000475540 THRBP10828 461 aa4.52□□□□□ -1.69
SMC5-203ENST00000475540 LAMP1P11279 417 aa4.52□□□□□ -1.69
SMC5-203ENST00000475540 FUT1P19526 365 aa4.52□□□□□ -1.69
SMC5-203ENST00000475540 FCARP24071 287 aa4.52□□□□□ -1.69
SMC5-203ENST00000475540 PSMA5P28066 241 aa4.52□□□□□ -1.69
SMC5-203ENST00000475540 NSFP46459 744 aaKnown RBP4.52□□□□□ -1.69
SMC5-203ENST00000475540 SSTP61278 116 aa4.52□□□□□ -1.69
SMC5-203ENST00000475540 MRPL28Q13084 256 aaKnown RBP4.52□□□□□ -1.69
SMC5-203ENST00000475540 MSLNQ13421 630 aaPredicted RBP4.52□□□□□ -1.69
SMC5-203ENST00000475540 RABL6Q3YEC7 729 aaPredicted RBP4.52□□□□□ -1.69
SMC5-203ENST00000475540 MS4A13Q5J8X5 152 aa4.52□□□□□ -1.69
SMC5-203ENST00000475540 ATAD3BQ5T9A4 648 aa4.52□□□□□ -1.69
SMC5-203ENST00000475540 PRAMEF7Q5VXH5 474 aa4.52□□□□□ -1.69
SMC5-203ENST00000475540 CENPPQ6IPU0 288 aa4.52□□□□□ -1.69
SMC5-203ENST00000475540 UBQLNLQ8IYU4 475 aa4.52□□□□□ -1.69
SMC5-203ENST00000475540 RNF148Q8N7C7 305 aa4.52□□□□□ -1.69
SMC5-203ENST00000475540 FAM71CQ8NEG0 241 aa4.52□□□□□ -1.69
SMC5-203ENST00000475540 TRPV6Q9H1D0 765 aa4.52□□□□□ -1.69
SMC5-203ENST00000475540 PALMDQ9NP74 551 aa4.52□□□□□ -1.69
SMC5-203ENST00000475540 HOMER3Q9NSC5 361 aa4.52□□□□□ -1.69
SMC5-203ENST00000475540 SMC3Q9UQE7 1217 aa4.52□□□□□ -1.69
SMC5-203ENST00000475540 CFAP65Q6ZU64 1925 aaKnown RBP4.52□□□□□ -1.69
SMC5-203ENST00000475540 NPIPA5A0A0B4J1W7 369 aa4.51□□□□□ -1.69
SMC5-203ENST00000475540 FAM230AA0A1W2PPH8 454 aa4.51□□□□□ -1.69
SMC5-203ENST00000475540 NPIPA5E9PKD4 350 aa4.51□□□□□ -1.69
SMC5-203ENST00000475540 DUSP14O95147 198 aaKnown RBP4.51□□□□□ -1.69
SMC5-203ENST00000475540 SFTPCP11686 197 aa4.51□□□□□ -1.69
SMC5-203ENST00000475540 MARCKSP29966 332 aaPredicted RBP4.51□□□□□ -1.69
SMC5-203ENST00000475540 SAA4P35542 130 aa4.51□□□□□ -1.69
SMC5-203ENST00000475540 TRIM23P36406 574 aa4.51□□□□□ -1.69
SMC5-203ENST00000475540 TRPC1P48995 793 aa4.51□□□□□ -1.69
SMC5-203ENST00000475540 ARHGDIBP52566 201 aa4.51□□□□□ -1.69
SMC5-203ENST00000475540 CHIT1Q13231 466 aa4.51□□□□□ -1.69
SMC5-203ENST00000475540 EXOSC7Q15024 291 aaKnown RBP4.51□□□□□ -1.69
SMC5-203ENST00000475540 HKDC1Q2TB90 917 aa4.51□□□□□ -1.69
SMC5-203ENST00000475540 KRTAP13-3Q3SY46 172 aa4.51□□□□□ -1.69
SMC5-203ENST00000475540 SPATA46Q5T0L3 261 aa4.51□□□□□ -1.69
SMC5-203ENST00000475540 OR4A16Q8NH70 328 aa4.51□□□□□ -1.69
SMC5-203ENST00000475540 CCDC51Q96ER9 411 aa4.51□□□□□ -1.69
SMC5-203ENST00000475540 C9orf85Q96MD7 179 aa4.51□□□□□ -1.69
SMC5-203ENST00000475540 CASD1Q96PB1 797 aa4.51□□□□□ -1.69
SMC5-203ENST00000475540 GPA33Q99795 319 aa4.51□□□□□ -1.69
SMC5-203ENST00000475540 KRTAP4-3Q9BYR4 195 aa4.51□□□□□ -1.69
SMC5-203ENST00000475540 POLR1EQ9GZS1 481 aaKnown RBP4.51□□□□□ -1.69
SMC5-203ENST00000475540 VPS37BQ9H9H4 285 aa4.51□□□□□ -1.69
SMC5-203ENST00000475540 NRN1Q9NPD7 142 aa4.51□□□□□ -1.69
SMC5-203ENST00000475540 CNOT2Q9NZN8 540 aaKnown RBP4.51□□□□□ -1.69
SMC5-203ENST00000475540 FAM153AQ9UHL3 310 aa4.51□□□□□ -1.69
SMC5-203ENST00000475540 SYNJ2O15056 1496 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 EEF2KO00418 725 aaKnown RBP4.5□□□□□ -1.69
SMC5-203ENST00000475540 CDX4O14627 284 aaPredicted RBP4.5□□□□□ -1.69
SMC5-203ENST00000475540 EI24O14681 340 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 TYROBPO43914 113 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 LYPD3O95274 346 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 P0C879 139 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 GLRA2P23416 452 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 AKT2P31751 481 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 HSPA1LP34931 641 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 NUMBP49757 651 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 VCPP55072 806 aaKnown RBP4.5□□□□□ -1.69
SMC5-203ENST00000475540 CCZ1BP86790 482 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 CCZ1P86791 482 aaPredicted RBP4.5□□□□□ -1.69
SMC5-203ENST00000475540 GPM6BQ13491 265 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 ASAH1Q13510 395 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 TGIF1Q15583 401 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 CD226Q15762 336 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 ZKSCAN8Q15776 578 aaPredicted RBP4.5□□□□□ -1.69
SMC5-203ENST00000475540 CARTPTQ16568 116 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 ISXQ2M1V0 245 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 PAN3Q58A45 887 aaKnown RBP4.5□□□□□ -1.69
SMC5-203ENST00000475540 CCDC73Q6ZRK6 1079 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 OR52M1Q8NGK5 317 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 SELENOMQ8WWX9 145 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 FAF2Q96CS3 445 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 TUBGCP3Q96CW5 907 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 RAB39BQ96DA2 213 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 MAGEB18Q96M61 343 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 CPXM1Q96SM3 734 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 COQ7Q99807 217 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 JPH2Q9BR39 696 aaPredicted RBP4.5□□□□□ -1.69
SMC5-203ENST00000475540 FICDQ9BVA6 458 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 ZNF416Q9BWM5 594 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 FTHL17Q9BXU8 183 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 NMNAT2Q9BZQ4 307 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 TMEM231Q9H6L2 316 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 ASB8Q9H765 288 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 ESM1Q9NQ30 184 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 FARSBQ9NSD9 589 aaKnown RBP4.5□□□□□ -1.69
SMC5-203ENST00000475540 NDUFA13Q9P0J0 144 aa4.5□□□□□ -1.69
SMC5-203ENST00000475540 MOKQ9UQ07 419 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 374.3 ms