RNA–Protein interactions for RNA: ENST00000474249.5

GAPDH-208, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,333 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-208ENST00000474249 PPP3CBP16298 524 aa11.88□□□□□ -0.51
GAPDH-208ENST00000474249 TCEA1P23193 301 aaKnown RBP11.88□□□□□ -0.51
GAPDH-208ENST00000474249 MAGEA12P43365 314 aa11.88□□□□□ -0.51
GAPDH-208ENST00000474249 SLC6A8P48029 635 aa11.88□□□□□ -0.51
GAPDH-208ENST00000474249 CCNG1P51959 295 aa11.88□□□□□ -0.51
GAPDH-208ENST00000474249 NR1H2P55055 460 aa11.88□□□□□ -0.51
GAPDH-208ENST00000474249 EEFSECP57772 596 aaKnown RBP11.88□□□□□ -0.51
GAPDH-208ENST00000474249 RAE1P78406 368 aaKnown RBP11.88□□□□□ -0.51
GAPDH-208ENST00000474249 PON3Q15166 354 aa11.88□□□□□ -0.51
GAPDH-208ENST00000474249 GLYR1Q49A26 553 aaPredicted RBP11.88□□□□□ -0.51
GAPDH-208ENST00000474249 LETMD1Q6P1Q0 360 aa11.88□□□□□ -0.51
GAPDH-208ENST00000474249 RPS27LQ71UM5 84 aaKnown RBP11.88□□□□□ -0.51
GAPDH-208ENST00000474249 CHMP1BQ7LBR1 199 aa11.88□□□□□ -0.51
GAPDH-208ENST00000474249 GGNQ86UU5 652 aa11.88□□□□□ -0.51
GAPDH-208ENST00000474249 PTGR2Q8N8N7 351 aaPredicted RBP11.88□□□□□ -0.51
GAPDH-208ENST00000474249 OR7G2Q8NG99 324 aa11.88□□□□□ -0.51
GAPDH-208ENST00000474249 TMEM171Q8WVE6 324 aa11.88□□□□□ -0.51
GAPDH-208ENST00000474249 KAT2AQ92830 837 aa11.88□□□□□ -0.51
GAPDH-208ENST00000474249 EFHD2Q96C19 240 aaPredicted RBP11.88□□□□□ -0.51
GAPDH-208ENST00000474249 C1QTNF3Q9BXJ4 246 aa11.88□□□□□ -0.51
GAPDH-208ENST00000474249 KCNF1Q9H3M0 494 aa11.88□□□□□ -0.51
GAPDH-208ENST00000474249 FOLH1BQ9HBA9 442 aa11.88□□□□□ -0.51
GAPDH-208ENST00000474249 FLRT3Q9NZU0 649 aa11.88□□□□□ -0.51
GAPDH-208ENST00000474249 MED11Q9P086 117 aa11.88□□□□□ -0.51
GAPDH-208ENST00000474249 CPSF2Q9P2I0 782 aaKnown RBP11.88□□□□□ -0.51
GAPDH-208ENST00000474249 PROCRQ9UNN8 238 aa11.88□□□□□ -0.51
GAPDH-208ENST00000474249 CADP27708 2225 aa11.88□□□□□ -0.51
GAPDH-208ENST00000474249 IGLV3-32A0A0A0MS00 114 aa11.87□□□□□ -0.51
GAPDH-208ENST00000474249 RAD51CO43502 376 aa11.87□□□□□ -0.51
GAPDH-208ENST00000474249 PSMG1O95456 288 aa11.87□□□□□ -0.51
GAPDH-208ENST00000474249 HK1P19367 917 aa11.87□□□□□ -0.51
GAPDH-208ENST00000474249 STX2P32856 288 aa11.87□□□□□ -0.51
GAPDH-208ENST00000474249 EVI2BP34910 448 aa11.87□□□□□ -0.51
GAPDH-208ENST00000474249 KCNJ5P48544 419 aa11.87□□□□□ -0.51
GAPDH-208ENST00000474249 ATP5J2P56134 94 aa11.87□□□□□ -0.51
GAPDH-208ENST00000474249 IFT88Q13099 833 aa11.87□□□□□ -0.51
GAPDH-208ENST00000474249 CALCOCO2Q13137 446 aa11.87□□□□□ -0.51
GAPDH-208ENST00000474249 GANABQ14697 944 aaKnown RBP11.87□□□□□ -0.51
GAPDH-208ENST00000474249 PRSS53Q2L4Q9 553 aa11.87□□□□□ -0.51
GAPDH-208ENST00000474249 SGO1Q5FBB7 561 aa11.87□□□□□ -0.51
GAPDH-208ENST00000474249 HIPK1Q86Z02 1210 aa11.87□□□□□ -0.51
GAPDH-208ENST00000474249 SLC44A2Q8IWA5 706 aaPredicted RBP11.87□□□□□ -0.51
GAPDH-208ENST00000474249 C1orf52Q8N6N3 182 aaKnown RBP11.87□□□□□ -0.51
GAPDH-208ENST00000474249 MAPK1IP1LQ8NDC0 245 aa11.87□□□□□ -0.51
GAPDH-208ENST00000474249 OR5M1Q8NGP8 315 aa11.87□□□□□ -0.51
GAPDH-208ENST00000474249 OR9A2Q8NGT5 310 aa11.87□□□□□ -0.51
GAPDH-208ENST00000474249 FBXO25Q8TCJ0 367 aa11.87□□□□□ -0.51
GAPDH-208ENST00000474249 PHF21BQ96EK2 531 aa11.87□□□□□ -0.51
GAPDH-208ENST00000474249 C1GALT1C1Q96EU7 318 aa11.87□□□□□ -0.51
GAPDH-208ENST00000474249 DTNBP1Q96EV8 351 aa11.87□□□□□ -0.51
GAPDH-208ENST00000474249 ADGRG7Q96K78 797 aa11.87□□□□□ -0.51
GAPDH-208ENST00000474249 KLHL4Q9C0H6 718 aa11.87□□□□□ -0.51
GAPDH-208ENST00000474249 OR10A4Q9H209 315 aa11.87□□□□□ -0.51
GAPDH-208ENST00000474249 CXorf56Q9H5V9 222 aa11.87□□□□□ -0.51
GAPDH-208ENST00000474249 RNF14Q9UBS8 474 aa11.87□□□□□ -0.51
GAPDH-208ENST00000474249 UTS2RQ9UKP6 389 aa11.87□□□□□ -0.51
GAPDH-208ENST00000474249 SLC12A4Q9UP95 1085 aa11.87□□□□□ -0.51
GAPDH-208ENST00000474249 AP4B1Q9Y6B7 739 aa11.87□□□□□ -0.51
GAPDH-208ENST00000474249 ZNF780BQ9Y6R6 833 aa11.87□□□□□ -0.51
GAPDH-208ENST00000474249 RNF223E7ERA6 249 aa11.86□□□□□ -0.51
GAPDH-208ENST00000474249 SS18L1O75177 396 aaPredicted RBP11.86□□□□□ -0.51
GAPDH-208ENST00000474249 RPS17P08708 135 aaKnown RBP11.86□□□□□ -0.51
GAPDH-208ENST00000474249 CLEC12BQ2HXU8 276 aa11.86□□□□□ -0.51
GAPDH-208ENST00000474249 CTU2Q2VPK5 515 aaKnown RBP11.86□□□□□ -0.51
GAPDH-208ENST00000474249 TTC19Q6DKK2 380 aaPredicted RBP11.86□□□□□ -0.51
GAPDH-208ENST00000474249 APOOLQ6UXV4 268 aa11.86□□□□□ -0.51
GAPDH-208ENST00000474249 DNAJC14Q6Y2X3 702 aaPredicted RBP11.86□□□□□ -0.51
GAPDH-208ENST00000474249 OR4K17Q8NGC6 315 aa11.86□□□□□ -0.51
GAPDH-208ENST00000474249 OR6K3Q8NGY3 331 aa11.86□□□□□ -0.51
GAPDH-208ENST00000474249 UHMK1Q8TAS1 419 aaKnown RBP11.86□□□□□ -0.51
GAPDH-208ENST00000474249 ZNF483Q8TF39 744 aaPredicted RBP11.86□□□□□ -0.51
GAPDH-208ENST00000474249 ATP6V1E2Q96A05 226 aa11.86□□□□□ -0.51
GAPDH-208ENST00000474249 PLPPR2Q96GM1 343 aa11.86□□□□□ -0.51
GAPDH-208ENST00000474249 FAIM2Q9BWQ8 316 aa11.86□□□□□ -0.51
GAPDH-208ENST00000474249 REG4Q9BYZ8 158 aa11.86□□□□□ -0.51
GAPDH-208ENST00000474249 ELOVL6Q9H5J4 265 aa11.86□□□□□ -0.51
GAPDH-208ENST00000474249 PPP4R1LQ9P1A2 415 aa11.86□□□□□ -0.51
GAPDH-208ENST00000474249 VPS29Q9UBQ0 182 aa11.86□□□□□ -0.51
GAPDH-208ENST00000474249 MCM8Q9UJA3 840 aa11.86□□□□□ -0.51
GAPDH-208ENST00000474249 SOD3P08294 240 aa11.86□□□□□ -0.51
GAPDH-208ENST00000474249 IL3P08700 152 aa11.86□□□□□ -0.51
GAPDH-208ENST00000474249 CHN1P15882 459 aa11.86□□□□□ -0.51
GAPDH-208ENST00000474249 PSMB1P20618 241 aaKnown RBP11.86□□□□□ -0.51
GAPDH-208ENST00000474249 PSMA4P25789 261 aaKnown RBP11.86□□□□□ -0.51
GAPDH-208ENST00000474249 IL12BP29460 328 aa11.86□□□□□ -0.51
GAPDH-208ENST00000474249 PAFAH1B1P43034 410 aa11.86□□□□□ -0.51
GAPDH-208ENST00000474249 PLTPP55058 493 aa11.86□□□□□ -0.51
GAPDH-208ENST00000474249 DMTNQ08495 405 aa11.86□□□□□ -0.51
GAPDH-208ENST00000474249 ZNF844Q08AG5 666 aa11.86□□□□□ -0.51
GAPDH-208ENST00000474249 CYP27C1Q4G0S4 372 aa11.86□□□□□ -0.51
GAPDH-208ENST00000474249 UBAP2Q5T6F2 1119 aaKnown RBP11.86□□□□□ -0.51
GAPDH-208ENST00000474249 RAET1LQ5VY80 246 aa11.86□□□□□ -0.51
GAPDH-208ENST00000474249 HMBOX1Q6NT76 420 aa11.86□□□□□ -0.51
GAPDH-208ENST00000474249 KLC3Q6P597 504 aa11.86□□□□□ -0.51
GAPDH-208ENST00000474249 SEZ6L2Q6UXD5 910 aa11.86□□□□□ -0.51
GAPDH-208ENST00000474249 SPATA4Q8NEY3 305 aa11.86□□□□□ -0.51
GAPDH-208ENST00000474249 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.86□□□□□ -0.51
GAPDH-208ENST00000474249 RAB3IL1Q8TBN0 382 aa11.86□□□□□ -0.51
GAPDH-208ENST00000474249 DUSP19Q8WTR2 217 aa11.86□□□□□ -0.51
GAPDH-208ENST00000474249 SELENOMQ8WWX9 145 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms