RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 PIGUQ9H490 435 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 SDR39U1Q9NRG7 319 aaPredicted RBP12.6□□□□□ -0.39
USF1-205ENST00000473969 GIN1Q9NXP7 522 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 QPCTLQ9NXS2 382 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 BTNL2Q9UIR0 455 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 DCTN4Q9UJW0 460 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 SLC5A6Q9Y289 635 aa12.6□□□□□ -0.39
USF1-205ENST00000473969 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 A0A0G2JND7 137 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 A0A1B0GTH9 108 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 A0A1B0GUH1 482 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 GXYLT2A0PJZ3 443 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 C9JVG2 144 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 SLC19A2O60779 497 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 TRIM3O75382 744 aaPredicted RBP12.59□□□□□ -0.39
USF1-205ENST00000473969 ANP32DO95626 131 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 ACP2P11117 423 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 CYP4B1P13584 511 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 NCF2P19878 526 aaPredicted RBP12.59□□□□□ -0.39
USF1-205ENST00000473969 PTGS2P35354 604 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 GCKP35557 465 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 ANXA11P50995 505 aaKnown RBP12.59□□□□□ -0.39
USF1-205ENST00000473969 POLR2JP52435 117 aaKnown RBP12.59□□□□□ -0.39
USF1-205ENST00000473969 PER3P56645 1201 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 DUSP5Q16690 384 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 DESI1Q6ICB0 168 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 ANGPTL8Q6UXH0 198 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 ZNF621Q6ZSS3 439 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 SPPL2CQ8IUH8 684 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 EID3Q8N140 333 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 GIMAP5Q96F15 307 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 CCDC115Q96NT0 180 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 BTBD2Q9BX70 525 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 TBL1XR1Q9BZK7 514 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 RABEP2Q9H5N1 569 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 ZDHHC11Q9H8X9 412 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 PROK2Q9HC23 129 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 HHATLQ9HCP6 504 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 DUSP22Q9NRW4 184 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 ABCG2Q9UNQ0 655 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 MAST4O15021 2626 aa12.59□□□□□ -0.39
USF1-205ENST00000473969 RP1L1Q8IWN7 2480 aaPredicted RBP12.59□□□□□ -0.39
USF1-205ENST00000473969 NBASA2RRP1 2371 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 TRGV5A0A0B4J1U4 118 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 FAM234BA2RU67 622 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 C2orf72A6NCS6 295 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 DYNC1I1O14576 645 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 RFXANKO14593 260 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 SCO2O43819 266 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 SCN2BO60939 215 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 CBR3O75828 277 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 KCNK2O95069 426 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 UTS2O95399 124 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 AGR2O95994 175 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 STSP08842 583 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 ESRRAP11474 423 aaPredicted RBP12.58□□□□□ -0.4
USF1-205ENST00000473969 IL12AP29459 219 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 LCN1P31025 176 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 EVI2BP34910 448 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 MAP3K8P41279 467 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 MAN2A2P49641 1150 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 PHC1P78364 1004 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 HSF1Q00613 529 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 GUCY1A3Q02108 690 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 UBAP2LQ14157 1087 aaKnown RBP12.58□□□□□ -0.4
USF1-205ENST00000473969 ATAD3BQ5T9A4 648 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 TIGD3Q6B0B8 471 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 FIGNL1Q6PIW4 674 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 STON2Q8WXE9 905 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 HOXB13Q92826 284 aaPredicted RBP12.58□□□□□ -0.4
USF1-205ENST00000473969 OTUB1Q96FW1 271 aaPredicted RBP12.58□□□□□ -0.4
USF1-205ENST00000473969 ITCHQ96J02 903 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 GNRHR2Q96P88 292 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 SLC35A5Q9BS91 424 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 ZNF703Q9H7S9 590 aaPredicted RBP12.58□□□□□ -0.4
USF1-205ENST00000473969 GALNT9Q9HCQ5 603 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 EXD2Q9NVH0 621 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 GPATCH2Q9NW75 528 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 PPP4R1LQ9P1A2 415 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 SUCOQ9UBS9 1254 aaKnown RBP12.58□□□□□ -0.4
USF1-205ENST00000473969 SH3BGRL2Q9UJC5 107 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 SHANK1Q9Y566 2161 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 WIF1Q9Y5W5 379 aa12.58□□□□□ -0.4
USF1-205ENST00000473969 CCDC154A6NI56 674 aa12.57□□□□□ -0.4
USF1-205ENST00000473969 LRRC3CA6NJW4 275 aa12.57□□□□□ -0.4
USF1-205ENST00000473969 SCDO00767 359 aa12.57□□□□□ -0.4
USF1-205ENST00000473969 SNPHO15079 494 aa12.57□□□□□ -0.4
USF1-205ENST00000473969 LRRTM2O43300 516 aa12.57□□□□□ -0.4
USF1-205ENST00000473969 SUSD5O60279 629 aa12.57□□□□□ -0.4
USF1-205ENST00000473969 HCN1O60741 890 aa12.57□□□□□ -0.4
USF1-205ENST00000473969 WISP2O76076 250 aa12.57□□□□□ -0.4
USF1-205ENST00000473969 KRT75O95678 551 aa12.57□□□□□ -0.4
USF1-205ENST00000473969 AK1P00568 194 aa12.57□□□□□ -0.4
USF1-205ENST00000473969 TPOP07202 933 aa12.57□□□□□ -0.4
USF1-205ENST00000473969 RFPL3SP0C7P2 107 aa12.57□□□□□ -0.4
USF1-205ENST00000473969 MDH1P40925 334 aaKnown RBP12.57□□□□□ -0.4
USF1-205ENST00000473969 ATP4BP51164 291 aa12.57□□□□□ -0.4
USF1-205ENST00000473969 SQLEQ14534 574 aa12.57□□□□□ -0.4
USF1-205ENST00000473969 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.57□□□□□ -0.4
USF1-205ENST00000473969 C4orf17Q53FE4 359 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms