RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 SERHLQ9NQF3 203 aa11.39□□□□□ -0.59
DDX56-209ENST00000473924 GIN1Q9NXP7 522 aa11.39□□□□□ -0.59
DDX56-209ENST00000473924 TUBA8Q9NY65 449 aaPredicted RBP11.39□□□□□ -0.59
DDX56-209ENST00000473924 NUP214P35658 2090 aaPredicted RBP11.39□□□□□ -0.59
DDX56-209ENST00000473924 EXPH5Q8NEV8 1989 aa11.38□□□□□ -0.59
DDX56-209ENST00000473924 PRAMEF25A6NGN4 478 aa11.38□□□□□ -0.59
DDX56-209ENST00000473924 FAM166BA8MTA8 275 aa11.38□□□□□ -0.59
DDX56-209ENST00000473924 NPIPA5E9PKD4 350 aa11.38□□□□□ -0.59
DDX56-209ENST00000473924 ANGPT2O15123 496 aa11.38□□□□□ -0.59
DDX56-209ENST00000473924 ICOSLGO75144 302 aa11.38□□□□□ -0.59
DDX56-209ENST00000473924 KCNK2O95069 426 aa11.38□□□□□ -0.59
DDX56-209ENST00000473924 KRT75O95678 551 aa11.38□□□□□ -0.59
DDX56-209ENST00000473924 CAPN3P20807 821 aa11.38□□□□□ -0.59
DDX56-209ENST00000473924 ATP6V1C1P21283 382 aa11.38□□□□□ -0.59
DDX56-209ENST00000473924 CLK3P49761 638 aaKnown RBP11.38□□□□□ -0.59
DDX56-209ENST00000473924 KHKP50053 298 aa11.38□□□□□ -0.59
DDX56-209ENST00000473924 ANXA11P50995 505 aaKnown RBP11.38□□□□□ -0.59
DDX56-209ENST00000473924 PPIAP62937 165 aaKnown RBP11.38□□□□□ -0.59
DDX56-209ENST00000473924 FOXK1P85037 733 aa11.38□□□□□ -0.59
DDX56-209ENST00000473924 SNTA1Q13424 505 aa11.38□□□□□ -0.59
DDX56-209ENST00000473924 EXOSC6Q5RKV6 272 aaKnown RBP11.38□□□□□ -0.59
DDX56-209ENST00000473924 CCNJQ5T5M9 372 aa11.38□□□□□ -0.59
DDX56-209ENST00000473924 ATAD3BQ5T9A4 648 aa11.38□□□□□ -0.59
DDX56-209ENST00000473924 SAXO2Q658L1 398 aa11.38□□□□□ -0.59
DDX56-209ENST00000473924 SLC30A6Q6NXT4 461 aa11.38□□□□□ -0.59
DDX56-209ENST00000473924 SPATA21Q7Z572 469 aa11.38□□□□□ -0.59
DDX56-209ENST00000473924 C10orf82Q8WW14 230 aa11.38□□□□□ -0.59
DDX56-209ENST00000473924 GTF2H4Q92759 462 aa11.38□□□□□ -0.59
DDX56-209ENST00000473924 BARD1Q99728 777 aaKnown RBP11.38□□□□□ -0.59
DDX56-209ENST00000473924 G6PC3Q9BUM1 346 aa11.38□□□□□ -0.59
DDX56-209ENST00000473924 TTTY12Q9BZ98 90 aa11.38□□□□□ -0.59
DDX56-209ENST00000473924 OR51I1Q9H343 314 aa11.38□□□□□ -0.59
DDX56-209ENST00000473924 ZNF385DQ9H6B1 395 aa11.38□□□□□ -0.59
DDX56-209ENST00000473924 IL1RL2Q9HB29 575 aa11.38□□□□□ -0.59
DDX56-209ENST00000473924 EXD2Q9NVH0 621 aa11.38□□□□□ -0.59
DDX56-209ENST00000473924 B4GALT7Q9UBV7 327 aa11.38□□□□□ -0.59
DDX56-209ENST00000473924 NPIPA1Q9UND3 350 aa11.38□□□□□ -0.59
DDX56-209ENST00000473924 BSNQ9UPA5 3926 aa11.38□□□□□ -0.59
DDX56-209ENST00000473924 EML6Q6ZMW3 1958 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 ZNF462Q96JM2 2506 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 A0A1W2PP18 115 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 C2orf72A6NCS6 295 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 PYCARD-AS1I3L0S3 204 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 J3QKU1 62 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 GNB5O14775 395 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 SCO2O43819 266 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 UTS2O95399 124 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 AGR2O95994 175 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 IGKV1D-16P01601 117 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 ZCCHC18P0CG32 403 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 OR12D1P0DN82 309 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 EDN3P14138 238 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 HPGDP15428 266 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 MST1P26927 711 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 MAN2A2P49641 1150 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 UBAP2LQ14157 1087 aaKnown RBP11.37□□□□□ -0.59
DDX56-209ENST00000473924 RNFT1Q5M7Z0 435 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 DCST2Q5T1A1 773 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 ZNF324BQ6AW86 544 aaPredicted RBP11.37□□□□□ -0.59
DDX56-209ENST00000473924 TNFAIP8L2Q6P589 184 aaPredicted RBP11.37□□□□□ -0.59
DDX56-209ENST00000473924 TMEM81Q6P7N7 255 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 C16orf62Q7Z3J2 963 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 RNF130Q86XS8 419 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 GALNT11Q8NCW6 608 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 OR1J4Q8NGS1 313 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 PNPT1Q8TCS8 783 aaKnown RBP11.37□□□□□ -0.59
DDX56-209ENST00000473924 MIPOL1Q8TD10 442 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 XAGE5Q8WWM1 108 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 SLX1AQ9BQ83 275 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 TBL1XR1Q9BZK7 514 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 SERHL2Q9H4I8 314 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 PROK2Q9HC23 129 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 GALNT9Q9HCQ5 603 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 ZFP64Q9NPA5 681 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 SAR1AQ9NR31 198 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 SEC14L3Q9UDX4 400 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 LEF1Q9UJU2 399 aaPredicted RBP11.37□□□□□ -0.59
DDX56-209ENST00000473924 NDUFAF1Q9Y375 327 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 KCNE3Q9Y6H6 103 aa11.37□□□□□ -0.59
DDX56-209ENST00000473924 A0A096LPI6 279 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 ANKUB1A6NFN9 424 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 ASNA1O43681 348 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 CDC40O60508 579 aaKnown RBP eCLIP11.36□□□□□ -0.59
DDX56-209ENST00000473924 CCDC22O60826 627 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 TRIM3O75382 744 aaPredicted RBP11.36□□□□□ -0.59
DDX56-209ENST00000473924 UNC5CO95185 931 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 AK1P00568 194 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 SNRPB2P08579 225 aaKnown RBP11.36□□□□□ -0.59
DDX56-209ENST00000473924 CD1EP15812 388 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 DRD4P21917 467 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 ELAVL4P26378 380 aaKnown RBP11.36□□□□□ -0.59
DDX56-209ENST00000473924 LCN1P31025 176 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 EVI2BP34910 448 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 CRATP43155 626 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 MAGEA5P43359 124 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 FOXO1Q12778 655 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 TOMM20Q15388 145 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.36□□□□□ -0.59
DDX56-209ENST00000473924 GRAMD1BQ3KR37 738 aa11.36□□□□□ -0.59
DDX56-209ENST00000473924 GTDC1Q4AE62 458 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms