RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 ASPDHA6ND91 283 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 CD8B2A6NJW9 211 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 C17orf105B2RV13 164 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 TLR4O00206 839 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 EEF2KO00418 725 aaKnown RBP2.09□□□□□ -2.07
CALD1-216ENST00000473714 CHUKO15111 745 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 TRAPPC3O43617 180 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 RANBP6O60518 1105 aaKnown RBP2.09□□□□□ -2.07
CALD1-216ENST00000473714 SMPD2O60906 423 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 PEX11AO75192 247 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 HMMRO75330 724 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 B3GAT3O94766 335 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 OR6A2O95222 327 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 BAG4O95429 457 aaKnown RBP2.09□□□□□ -2.07
CALD1-216ENST00000473714 TGFAP01135 160 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 APOHP02749 345 aaPredicted RBP2.09□□□□□ -2.07
CALD1-216ENST00000473714 IGHV4-34P06331 123 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 SFTPBP07988 381 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 OR4Q2P0C623 313 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 DLATP10515 647 aaKnown RBP2.09□□□□□ -2.07
CALD1-216ENST00000473714 NCF1P14598 390 aaPredicted RBP2.09□□□□□ -2.07
CALD1-216ENST00000473714 TCN2P20062 427 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 TNFRSF1BP20333 461 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 DGKAP23743 735 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 HLA-FP30511 346 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 HNRNPH3P31942 346 aaKnown RBP2.09□□□□□ -2.07
CALD1-216ENST00000473714 UGT1A3P35503 534 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 CDKN2AP42771 156 aaKnown RBP2.09□□□□□ -2.07
CALD1-216ENST00000473714 OR3A3P47888 321 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 SLC6A12P48065 614 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 TDO2P48775 406 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 CAMLGP49069 296 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 TKTL1P51854 596 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 SSTP61278 116 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 HERV-K104P61576 105 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 KCNJ10P78508 379 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 NUCB2P80303 420 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 ZXDBP98169 803 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 MYL7Q01449 175 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 EGR4Q05215 589 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 TAF10Q12962 218 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 DMP1Q13316 513 aaPredicted RBP2.09□□□□□ -2.07
CALD1-216ENST00000473714 SGCGQ13326 291 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 ITGB3BPQ13352 177 aaPredicted RBP2.09□□□□□ -2.07
CALD1-216ENST00000473714 ZNF177Q13360 481 aaPredicted RBP2.09□□□□□ -2.07
CALD1-216ENST00000473714 TRA2AQ13595 282 aaKnown RBP eCLIP2.09□□□□□ -2.07
CALD1-216ENST00000473714 CDH18Q13634 790 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 WDR43Q15061 677 aaKnown RBP eCLIP2.09□□□□□ -2.07
CALD1-216ENST00000473714 CDKN3Q16667 212 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 DEFB113Q30KQ7 82 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 FASTKD1Q53R41 847 aaKnown RBP2.09□□□□□ -2.07
CALD1-216ENST00000473714 LDLRAP1Q5SW96 308 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 AGAP6Q5VW22 663 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 GALNT17Q6IS24 598 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 GUSBP11Q6P575 273 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 AFTPHQ6ULP2 937 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 SIGLEC15Q6ZMC9 328 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 MEX3BQ6ZN04 569 aaKnown RBP2.09□□□□□ -2.07
CALD1-216ENST00000473714 EFL1Q7Z2Z2 1120 aaKnown RBP2.09□□□□□ -2.07
CALD1-216ENST00000473714 ADAMTSL2Q86TH1 951 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 PRUNE1Q86TP1 453 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 KCNMB4Q86W47 210 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 PLD3Q8IV08 490 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 FBXW8Q8N3Y1 598 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 KLHDC1Q8N7A1 406 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 NIPA2Q8N8Q9 360 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 BMPERQ8N8U9 685 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 GBP7Q8N8V2 638 aaPredicted RBP2.09□□□□□ -2.07
CALD1-216ENST00000473714 ZNF114Q8NC26 417 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 TMEM185AQ8NFB2 350 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 KBTBD8Q8NFY9 601 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 OR7A2PQ8NGA2 310 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 FGFBP3Q8TAT2 258 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 RNASE8Q8TDE3 154 aaKnown RBP2.09□□□□□ -2.07
CALD1-216ENST00000473714 ELP5Q8TE02 316 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 GANCQ8TET4 914 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 LRRC15Q8TF66 581 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 SECTM1Q8WVN6 248 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 THRSPQ92748 146 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 HAS2Q92819 552 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 DTD2Q96FN9 168 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 CPB2Q96IY4 423 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 CYP2S1Q96SQ9 504 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 CCDC3Q9BQI4 270 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 ALKBH7Q9BT30 221 aaPredicted RBP2.09□□□□□ -2.07
CALD1-216ENST00000473714 LRRC1Q9BTT6 524 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 LRRC2Q9BYS8 371 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 HSD3B7Q9H2F3 369 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 RIBC2Q9H4K1 309 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 DCLRE1BQ9H816 532 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 LIN28AQ9H9Z2 209 aaKnown RBP2.09□□□□□ -2.07
CALD1-216ENST00000473714 FN3KRPQ9HA64 309 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 LRRC4Q9HBW1 653 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 ZBTB20Q9HC78 741 aaPredicted RBP2.09□□□□□ -2.07
CALD1-216ENST00000473714 NGBQ9NPG2 151 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 MRPL40Q9NQ50 206 aaKnown RBP2.09□□□□□ -2.07
CALD1-216ENST00000473714 AGPAT4Q9NRZ5 378 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 EXOC1Q9NV70 894 aa2.09□□□□□ -2.07
CALD1-216ENST00000473714 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.09□□□□□ -2.07
CALD1-216ENST00000473714 P4HTMQ9NXG6 502 aa2.09□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms