RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 DDX31Q9H8H2 851 aaKnown RBP19.79■□□□□ 0.76
COL18A1-207ENST00000473212 KCNK6Q9Y257 313 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 EYSQ5T1H1 3165 aa19.79■□□□□ 0.76
COL18A1-207ENST00000473212 A0A1W2PR48 441 aa19.78■□□□□ 0.76
COL18A1-207ENST00000473212 OR52A4PA6NMU1 304 aa19.78■□□□□ 0.76
COL18A1-207ENST00000473212 GNSP15586 552 aa19.78■□□□□ 0.76
COL18A1-207ENST00000473212 BCL6P41182 706 aa19.78■□□□□ 0.76
COL18A1-207ENST00000473212 ZNF155Q12901 538 aaPredicted RBP19.78■□□□□ 0.76
COL18A1-207ENST00000473212 TMIEQ8NEW7 156 aa19.78■□□□□ 0.76
COL18A1-207ENST00000473212 FERD3LQ96RJ6 166 aa19.78■□□□□ 0.76
COL18A1-207ENST00000473212 INSM2Q96T92 566 aaPredicted RBP19.78■□□□□ 0.76
COL18A1-207ENST00000473212 TRIM45Q9H8W5 580 aaPredicted RBP19.78■□□□□ 0.76
COL18A1-207ENST00000473212 SEMA4GQ9NTN9 838 aa19.78■□□□□ 0.76
COL18A1-207ENST00000473212 IMP3Q9NV31 184 aaKnown RBP19.78■□□□□ 0.76
COL18A1-207ENST00000473212 TAS2R7Q9NYW3 318 aa19.78■□□□□ 0.76
COL18A1-207ENST00000473212 CHST2Q9Y4C5 530 aa19.78■□□□□ 0.76
COL18A1-207ENST00000473212 AKR7A2O43488 359 aa19.78■□□□□ 0.76
COL18A1-207ENST00000473212 TRHRP34981 398 aaPredicted RBP19.78■□□□□ 0.76
COL18A1-207ENST00000473212 SNRPD2P62316 118 aaKnown RBP19.78■□□□□ 0.76
COL18A1-207ENST00000473212 TSPAN31Q12999 210 aa19.78■□□□□ 0.76
COL18A1-207ENST00000473212 LIX1LQ8IVB5 337 aa19.78■□□□□ 0.76
COL18A1-207ENST00000473212 OTUB2Q96DC9 234 aa19.78■□□□□ 0.76
COL18A1-207ENST00000473212 C12orf66Q96MD2 445 aa19.78■□□□□ 0.76
COL18A1-207ENST00000473212 EDDM13A0A1B0GTR0 161 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 PRR23AA6NEV1 266 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 ISM1B1AKI9 464 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 ERI3O43414 337 aaKnown RBP19.77■□□□□ 0.76
COL18A1-207ENST00000473212 CTNNB1P35222 781 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 TRIM23P36406 574 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 INPP1P49441 399 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 CLDN20P56880 219 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 TAS2R38P59533 333 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 RAB8AP61006 207 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 TIGD3Q6B0B8 471 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 METAP1DQ6UB28 335 aaPredicted RBP19.77■□□□□ 0.76
COL18A1-207ENST00000473212 POGLUT1Q8NBL1 392 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 BBS1Q8NFJ9 593 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 OR4Q3Q8NH05 313 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 DOK4Q8TEW6 326 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 ZNF764Q96H86 408 aaPredicted RBP19.77■□□□□ 0.76
COL18A1-207ENST00000473212 PINK1Q9BXM7 581 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 MCUBQ9NWR8 336 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 MAN2B1O00754 1011 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 HLA-DPB1P04440 258 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 NTSP30990 170 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 RNF144AP50876 292 aaPredicted RBP19.77■□□□□ 0.76
COL18A1-207ENST00000473212 RAB25P57735 213 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 ABATP80404 500 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 CAMK1Q14012 370 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 ZNF311Q5JNZ3 666 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 PIP5KL1Q5T9C9 394 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 RASSF6Q6ZTQ3 369 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 RRM2BQ7LG56 351 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 OR2A1Q8NGT9 310 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 SPRYD4Q8WW59 207 aaPredicted RBP19.77■□□□□ 0.76
COL18A1-207ENST00000473212 DEDD2Q8WXF8 326 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 ARSGQ96EG1 525 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 RNF32Q9H0A6 362 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 SERGEFQ9UGK8 458 aa19.77■□□□□ 0.76
COL18A1-207ENST00000473212 CASC3O15234 703 aaKnown RBP19.76■□□□□ 0.75
COL18A1-207ENST00000473212 ZIC2O95409 532 aaPredicted RBP19.76■□□□□ 0.75
COL18A1-207ENST00000473212 SLC2A10O95528 541 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 C1QBP02746 253 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 IFNGR2P38484 337 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 CLDN2P57739 230 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 ARHGAP19Q14CB8 494 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 LTB4RQ15722 352 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 CCDC85BQ15834 202 aaPredicted RBP19.76■□□□□ 0.75
COL18A1-207ENST00000473212 ZNF57Q68EA5 555 aaPredicted RBP19.76■□□□□ 0.75
COL18A1-207ENST00000473212 SNAPC3Q92966 411 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 ZNF707Q96C28 371 aaPredicted RBP19.76■□□□□ 0.75
COL18A1-207ENST00000473212 WACQ9BTA9 647 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 ADAM29Q9UKF5 820 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 LIPT1Q9Y234 373 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 SLC27A6Q9Y2P4 619 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 A0A0G2JPF8 293 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 A0A0X1KG70 313 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 HNRNPCL2B2RXH8 293 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 HNRNPCL3B7ZW38 293 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 ARHGEF9O43307 516 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 AKAP8O43823 692 aaKnown RBP19.76■□□□□ 0.75
COL18A1-207ENST00000473212 TIMP1P01033 207 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 SLC35G4P0C7Q5 338 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 HNRNPCL4P0DMR1 293 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 CERS1P27544 350 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 DSG2Q14126 1118 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 TRAM2Q15035 370 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 BTBD16Q32M84 506 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 TMEM52BQ4KMG9 183 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 AADACL4Q5VUY2 407 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 NKAIN4Q8IVV8 208 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 SHISA5Q8N114 240 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 KLHL36Q8N4N3 616 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 FBXL6Q8N531 539 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 ZFPM2Q8WW38 1151 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 SMG7Q92540 1137 aaKnown RBP19.76■□□□□ 0.75
COL18A1-207ENST00000473212 ARMC5Q96C12 935 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 KCNJ15Q99712 375 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 ZNF649Q9BS31 505 aa19.76■□□□□ 0.75
COL18A1-207ENST00000473212 MARVELD1Q9BSK0 173 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms