RNA–Protein interactions for RNA: ENST00000470606.5

GTF3A-206, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 1,919 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-206ENST00000470606 UBAP1Q9NZ09 502 aa7.72□□□□□ -1.17
GTF3A-206ENST00000470606 NCDNQ9UBB6 729 aa7.72□□□□□ -1.17
GTF3A-206ENST00000470606 TMEFF2Q9UIK5 374 aaPredicted RBP7.72□□□□□ -1.17
GTF3A-206ENST00000470606 SATB2Q9UPW6 733 aa7.72□□□□□ -1.17
GTF3A-206ENST00000470606 NTNG1Q9Y2I2 539 aa7.72□□□□□ -1.17
GTF3A-206ENST00000470606 WDR45Q9Y484 360 aa7.72□□□□□ -1.17
GTF3A-206ENST00000470606 TESMINQ9Y4I5 508 aa7.72□□□□□ -1.17
GTF3A-206ENST00000470606 LYVE1Q9Y5Y7 322 aa7.72□□□□□ -1.17
GTF3A-206ENST00000470606 MED13Q9UHV7 2174 aa7.71□□□□□ -1.17
GTF3A-206ENST00000470606 EML6Q6ZMW3 1958 aa7.71□□□□□ -1.17
GTF3A-206ENST00000470606 B4E171 279 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 G3V2T6 193 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 KIAA0513O60268 411 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 ZNF354AO60765 605 aaPredicted RBP7.71□□□□□ -1.18
GTF3A-206ENST00000470606 PRAMEF2O60811 474 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 MITFO75030 526 aaPredicted RBP7.71□□□□□ -1.18
GTF3A-206ENST00000470606 ADAM11O75078 769 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 CPNE3O75131 537 aaKnown RBP7.71□□□□□ -1.18
GTF3A-206ENST00000470606 CSO75390 466 aaKnown RBP7.71□□□□□ -1.18
GTF3A-206ENST00000470606 SERPINB7O75635 380 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 KLF7O75840 302 aaPredicted RBP7.71□□□□□ -1.18
GTF3A-206ENST00000470606 PDE9AO76083 593 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 SNAP29O95721 258 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 IFNA14P01570 189 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 UQCRBP14927 111 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 POLR2IP36954 125 aaKnown RBP7.71□□□□□ -1.18
GTF3A-206ENST00000470606 TSPAN7P41732 249 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 ANXA11P50995 505 aaKnown RBP7.71□□□□□ -1.18
GTF3A-206ENST00000470606 EEF1A1P68104 462 aaKnown RBP7.71□□□□□ -1.18
GTF3A-206ENST00000470606 POU6F2P78424 691 aaPredicted RBP7.71□□□□□ -1.18
GTF3A-206ENST00000470606 TXNL4AP83876 142 aaKnown RBP7.71□□□□□ -1.18
GTF3A-206ENST00000470606 GANABQ14697 944 aaKnown RBP7.71□□□□□ -1.18
GTF3A-206ENST00000470606 TRIP6Q15654 476 aaKnown RBP7.71□□□□□ -1.18
GTF3A-206ENST00000470606 ATAD3BQ5T9A4 648 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 ANKRD37Q7Z713 158 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 STK32CQ86UX6 486 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 BPHLQ86WA6 291 aaPredicted RBP7.71□□□□□ -1.18
GTF3A-206ENST00000470606 CARM1Q86X55 608 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 GALNT6Q8NCL4 622 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 APCDD1LQ8NCL9 501 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 DEFB124Q8NES8 71 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 NFAM1Q8NET5 270 aaPredicted RBP7.71□□□□□ -1.18
GTF3A-206ENST00000470606 OR52P1PQ8NH57 321 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 OR52J3Q8NH60 311 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 PHF10Q8WUB8 498 aaKnown RBP7.71□□□□□ -1.18
GTF3A-206ENST00000470606 LZICQ8WZA0 190 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 C8orf44Q96CB5 159 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 ZNF354BQ96LW1 612 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 BTBD9Q96Q07 612 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 CMKLR1Q99788 373 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 C9orf16Q9BUW7 83 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 OSBPL10Q9BXB5 764 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 NXF5Q9H1B4 397 aaKnown RBP7.71□□□□□ -1.18
GTF3A-206ENST00000470606 YY1AP1Q9H869 796 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 LIN28AQ9H9Z2 209 aaKnown RBP7.71□□□□□ -1.18
GTF3A-206ENST00000470606 MAN2C1Q9NTJ4 1040 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 EXD2Q9NVH0 621 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 FLRT3Q9NZU0 649 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 IFT80Q9P2H3 777 aaPredicted RBP7.71□□□□□ -1.18
GTF3A-206ENST00000470606 KCND3Q9UK17 655 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 ACAD8Q9UKU7 415 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 PCDHGA8Q9Y5G5 932 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 AP4B1Q9Y6B7 739 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 ENPP4Q9Y6X5 453 aa7.71□□□□□ -1.18
GTF3A-206ENST00000470606 CEP295Q9C0D2 2601 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 SPAARA0A1B0GVQ0 90 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 CDC14CA4D256 554 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 TMEM247A6NEH6 219 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 C9orf172C9J069 976 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 NPIPB9F8W1W9 429 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 GNGT2O14610 69 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 PCDH17O14917 1159 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 DPM1O60762 260 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 LRP3O75074 770 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 COQ9O75208 318 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 STX11O75558 287 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 DNAJB5O75953 348 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 DKK1O94907 266 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 CLIC3O95833 236 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 MT-CO3P00414 261 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 UMODP07911 640 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 RPSAP08865 295 aaKnown RBP7.7□□□□□ -1.18
GTF3A-206ENST00000470606 PRG2P13727 222 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 TRHRP34981 398 aaPredicted RBP7.7□□□□□ -1.18
GTF3A-206ENST00000470606 PIGAP37287 484 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 RFX3P48380 749 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 MAPK10P53779 464 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 KCNC4Q03721 635 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 OCA2Q04671 838 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 FOXD4Q12950 439 aaPredicted RBP7.7□□□□□ -1.18
GTF3A-206ENST00000470606 ILKQ13418 452 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 PIN1Q13526 163 aaPredicted RBP7.7□□□□□ -1.18
GTF3A-206ENST00000470606 DAG1Q14118 895 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 SEC23BQ15437 767 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 CMPK2Q5EBM0 449 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 ZNF311Q5JNZ3 666 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 HES3Q5TGS1 186 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 SHQ1Q6PI26 577 aaKnown RBP7.7□□□□□ -1.18
GTF3A-206ENST00000470606 ISLR2Q6UXK2 745 aa7.7□□□□□ -1.18
GTF3A-206ENST00000470606 ZNF836Q6ZNA1 936 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms