RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 ELP4Q96EB1 424 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 POM121Q96HA1 1249 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 RHOXF2Q9BQY4 288 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 SHCBP1LQ9BZQ2 653 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 ACBD3Q9H3P7 528 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 PIGMQ9H3S5 423 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 MIEF1Q9NQG6 463 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 TAS2R7Q9NYW3 318 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 PSMC3IPQ9P2W1 217 aaPredicted RBP12.01□□□□□ -0.49
CPSF4-210ENST00000469897 EML6Q6ZMW3 1958 aa12.01□□□□□ -0.49
CPSF4-210ENST00000469897 PHF3Q92576 2039 aaKnown RBP12.01□□□□□ -0.49
CPSF4-210ENST00000469897 A0A087WV62 115 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 A0A1W2PNV4 684 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 A0A1W2PPR1 153 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 HCRTR2O43614 444 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 COQ9O75208 318 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 CRCPO75575 148 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 SMNDC1O75940 238 aaKnown RBP eCLIP12□□□□□ -0.49
CPSF4-210ENST00000469897 MYL2P10916 166 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 PEPDP12955 493 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 EVI2BP34910 448 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 CPOXP36551 454 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 GSTM5P46439 218 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 PSPHP78330 225 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 STX5Q13190 355 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 DECR1Q16698 335 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 ZYG11AQ6WRX3 759 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 SH2D5Q6ZV89 423 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 TRIM46Q7Z4K8 759 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 CEP112Q8N8E3 955 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 CNEP1R1Q8N9A8 125 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 FADS6Q8N9I5 356 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 FIG4Q92562 907 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 CCDC126Q96EE4 140 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 DTNBP1Q96EV8 351 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 EGLN2Q96KS0 407 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 AMDHD1Q96NU7 426 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 TXLNGYQ9BZA5 131 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 C12orf65Q9H3J6 166 aaKnown RBP12□□□□□ -0.49
CPSF4-210ENST00000469897 TNFRSF12AQ9NP84 129 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 SDHAF3Q9NRP4 125 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 DDX18Q9NVP1 670 aaKnown RBP12□□□□□ -0.49
CPSF4-210ENST00000469897 NDRG3Q9UGV2 375 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 PACSIN3Q9UKS6 424 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 GRID1Q9ULK0 1009 aa12□□□□□ -0.49
CPSF4-210ENST00000469897 NF1P21359 2839 aa11.99□□□□□ -0.49
CPSF4-210ENST00000469897 SLC22A20A6NK97 555 aa11.99□□□□□ -0.49
CPSF4-210ENST00000469897 GMFGO60234 142 aa11.99□□□□□ -0.49
CPSF4-210ENST00000469897 SEC22BO75396 215 aa11.99□□□□□ -0.49
CPSF4-210ENST00000469897 PROCP04070 461 aa11.99□□□□□ -0.49
CPSF4-210ENST00000469897 GABRA3P34903 492 aa11.99□□□□□ -0.49
CPSF4-210ENST00000469897 CLK3P49761 638 aaKnown RBP11.99□□□□□ -0.49
CPSF4-210ENST00000469897 SIRPAP78324 504 aa11.99□□□□□ -0.49
CPSF4-210ENST00000469897 CFAP157Q5JU67 520 aa11.99□□□□□ -0.49
CPSF4-210ENST00000469897 RAET1LQ5VY80 246 aa11.99□□□□□ -0.49
CPSF4-210ENST00000469897 OR2A2Q6IF42 318 aa11.99□□□□□ -0.49
CPSF4-210ENST00000469897 VWA1Q6PCB0 445 aa11.99□□□□□ -0.49
CPSF4-210ENST00000469897 BTLAQ7Z6A9 289 aa11.99□□□□□ -0.49
CPSF4-210ENST00000469897 EXOC3L1Q86VI1 746 aa11.99□□□□□ -0.49
CPSF4-210ENST00000469897 OR2L13Q8N349 312 aa11.99□□□□□ -0.49
CPSF4-210ENST00000469897 MEIOBQ8N635 442 aa11.99□□□□□ -0.49
CPSF4-210ENST00000469897 WFDC11Q8NEX6 87 aa11.99□□□□□ -0.49
CPSF4-210ENST00000469897 KIF18AQ8NI77 898 aa11.99□□□□□ -0.49
CPSF4-210ENST00000469897 FAM76AQ8TAV0 307 aa11.99□□□□□ -0.49
CPSF4-210ENST00000469897 GFM2Q969S9 779 aaKnown RBP11.99□□□□□ -0.49
CPSF4-210ENST00000469897 PGM2Q96G03 612 aa11.99□□□□□ -0.49
CPSF4-210ENST00000469897 WFIKKN1Q96NZ8 548 aa11.99□□□□□ -0.49
CPSF4-210ENST00000469897 PTGES2Q9H7Z7 377 aa11.99□□□□□ -0.49
CPSF4-210ENST00000469897 Q9N2J8 555 aa11.99□□□□□ -0.49
CPSF4-210ENST00000469897 MYNNQ9NPC7 610 aa11.99□□□□□ -0.49
CPSF4-210ENST00000469897 RRAGDQ9NQL2 400 aaPredicted RBP11.99□□□□□ -0.49
CPSF4-210ENST00000469897 DLL4Q9NR61 685 aa11.99□□□□□ -0.49
CPSF4-210ENST00000469897 WBP11Q9Y2W2 641 aaKnown RBP11.99□□□□□ -0.49
CPSF4-210ENST00000469897 CCL27Q9Y4X3 112 aa11.99□□□□□ -0.49
CPSF4-210ENST00000469897 NCKAP5O14513 1909 aa11.99□□□□□ -0.49
CPSF4-210ENST00000469897 DNAJC13O75165 2243 aa11.99□□□□□ -0.49
CPSF4-210ENST00000469897 SPG11Q96JI7 2443 aa11.98□□□□□ -0.49
CPSF4-210ENST00000469897 GXYLT2A0PJZ3 443 aa11.98□□□□□ -0.49
CPSF4-210ENST00000469897 MSTNO14793 375 aa11.98□□□□□ -0.49
CPSF4-210ENST00000469897 GLRA3O75311 464 aa11.98□□□□□ -0.49
CPSF4-210ENST00000469897 TNFRSF21O75509 655 aa11.98□□□□□ -0.49
CPSF4-210ENST00000469897 PSMG1O95456 288 aa11.98□□□□□ -0.49
CPSF4-210ENST00000469897 IL33O95760 270 aa11.98□□□□□ -0.49
CPSF4-210ENST00000469897 SHBGP04278 402 aa11.98□□□□□ -0.49
CPSF4-210ENST00000469897 CRHP06850 196 aa11.98□□□□□ -0.49
CPSF4-210ENST00000469897 UROSP10746 265 aa11.98□□□□□ -0.49
CPSF4-210ENST00000469897 HOXB4P17483 251 aaPredicted RBP11.98□□□□□ -0.49
CPSF4-210ENST00000469897 CD53P19397 219 aa11.98□□□□□ -0.49
CPSF4-210ENST00000469897 NTSP30990 170 aa11.98□□□□□ -0.49
CPSF4-210ENST00000469897 HOXC12P31275 282 aa11.98□□□□□ -0.49
CPSF4-210ENST00000469897 KIR2DL2P43627 348 aaPredicted RBP11.98□□□□□ -0.49
CPSF4-210ENST00000469897 CCT5P48643 541 aa11.98□□□□□ -0.49
CPSF4-210ENST00000469897 PRKAG1P54619 331 aa11.98□□□□□ -0.49
CPSF4-210ENST00000469897 CLDN20P56880 219 aa11.98□□□□□ -0.49
CPSF4-210ENST00000469897 EEFSECP57772 596 aaKnown RBP11.98□□□□□ -0.49
CPSF4-210ENST00000469897 DNAJB13P59910 316 aa11.98□□□□□ -0.49
CPSF4-210ENST00000469897 KIAA0040Q15053 153 aa11.98□□□□□ -0.49
CPSF4-210ENST00000469897 ZNHIT3Q15649 155 aaPredicted RBP11.98□□□□□ -0.49
CPSF4-210ENST00000469897 CLEC6AQ6EIG7 209 aa11.98□□□□□ -0.49
CPSF4-210ENST00000469897 ANKRD26P1Q6NSI1 321 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms