RNA–Protein interactions for RNA: ENST00000469717.5

TPM3-215, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 4,041 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-215ENST00000469717 CASP8AP2Q9UKL3 1982 aa7.48□□□□□ -1.21
TPM3-215ENST00000469717 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.48□□□□□ -1.21
TPM3-215ENST00000469717 MTMR11A4FU01 709 aa7.48□□□□□ -1.21
TPM3-215ENST00000469717 MMP20O60882 483 aa7.48□□□□□ -1.21
TPM3-215ENST00000469717 NMBP08949 121 aa7.48□□□□□ -1.21
TPM3-215ENST00000469717 HOXB1P14653 301 aaPredicted RBP7.48□□□□□ -1.21
TPM3-215ENST00000469717 SLC1A3P43003 542 aa7.48□□□□□ -1.21
TPM3-215ENST00000469717 TAS2R50P59544 299 aa7.48□□□□□ -1.21
TPM3-215ENST00000469717 ZNF177Q13360 481 aaPredicted RBP7.48□□□□□ -1.21
TPM3-215ENST00000469717 FZD5Q13467 585 aa7.48□□□□□ -1.21
TPM3-215ENST00000469717 SPIN4Q56A73 249 aa7.48□□□□□ -1.21
TPM3-215ENST00000469717 TCTE1Q5JU00 501 aa7.48□□□□□ -1.21
TPM3-215ENST00000469717 MORN1Q5T089 497 aa7.48□□□□□ -1.21
TPM3-215ENST00000469717 RSPO2Q6UXX9 243 aaPredicted RBP7.48□□□□□ -1.21
TPM3-215ENST00000469717 MACC1Q6ZN28 852 aa7.48□□□□□ -1.21
TPM3-215ENST00000469717 THOC6Q86W42 341 aaKnown RBP7.48□□□□□ -1.21
TPM3-215ENST00000469717 BOLLQ8N9W6 283 aaKnown RBP7.48□□□□□ -1.21
TPM3-215ENST00000469717 ZNF740Q8NDX6 193 aa7.48□□□□□ -1.21
TPM3-215ENST00000469717 OR4K5Q8NGD3 323 aa7.48□□□□□ -1.21
TPM3-215ENST00000469717 MOSPD2Q8NHP6 518 aa7.48□□□□□ -1.21
TPM3-215ENST00000469717 KLK6Q92876 244 aa7.48□□□□□ -1.21
TPM3-215ENST00000469717 SCRN2Q96FV2 425 aa7.48□□□□□ -1.21
TPM3-215ENST00000469717 NRTNQ99748 197 aa7.48□□□□□ -1.21
TPM3-215ENST00000469717 SLC12A9Q9BXP2 914 aa7.48□□□□□ -1.21
TPM3-215ENST00000469717 QRSL1Q9H0R6 528 aaKnown RBP7.48□□□□□ -1.21
TPM3-215ENST00000469717 TMEM168Q9H0V1 697 aa7.48□□□□□ -1.21
TPM3-215ENST00000469717 IFT22Q9H7X7 185 aa7.48□□□□□ -1.21
TPM3-215ENST00000469717 MRPL39Q9NYK5 338 aaKnown RBP7.48□□□□□ -1.21
TPM3-215ENST00000469717 GMEB2Q9UKD1 530 aa7.48□□□□□ -1.21
TPM3-215ENST00000469717 LHX6Q9UPM6 363 aa7.48□□□□□ -1.21
TPM3-215ENST00000469717 FKBP7Q9Y680 259 aa7.48□□□□□ -1.21
TPM3-215ENST00000469717 ANKDD1BA6NHY2 528 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 RNGTTO60942 597 aaKnown RBP7.47□□□□□ -1.21
TPM3-215ENST00000469717 ARAFP10398 606 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 DRD2P14416 443 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 FGF9P31371 208 aaPredicted RBP7.47□□□□□ -1.21
TPM3-215ENST00000469717 PREPP48147 710 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 GPR17Q13304 367 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 OCLNQ16625 522 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 SLC30A6Q6NXT4 461 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 CD200R1LQ6Q8B3 271 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 TFAP2EQ6VUC0 442 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 TPGS1Q6ZTW0 290 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 COMMD6Q7Z4G1 85 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 TMPRSS11BQ86T26 416 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 FAM26EQ8N5C1 309 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 ZNF485Q8NCK3 441 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 OR13C5Q8NGS8 318 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 INTS12Q96CB8 462 aaKnown RBP7.47□□□□□ -1.21
TPM3-215ENST00000469717 SEC22CQ9BRL7 303 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 C11orf49Q9H6J7 331 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 NT5DC2Q9H857 520 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 KCNK12Q9HB15 430 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 NANSQ9NR45 359 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 KLHL1Q9NR64 748 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 TDP1Q9NUW8 608 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 NDOR1Q9UHB4 597 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 BRWD1Q9NSI6 2320 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 CACNA1CQ13936 2221 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 MEIKINA0A087WXM9 373 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 TRDV1A0A1B0GX56 115 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 RNASET2O00584 256 aaKnown RBP7.47□□□□□ -1.21
TPM3-215ENST00000469717 GMDSO60547 372 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 B4GALT2O60909 372 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 KLHL18O94889 574 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 OR56A5P0C7T3 313 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 PTHLHP12272 177 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 CTGFP29279 349 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 LCN1P31025 176 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 TIA1P31483 386 aaKnown RBP eCLIP7.47□□□□□ -1.219e-11■■■■■ 30.9
TPM3-215ENST00000469717 POLR2GP62487 172 aaKnown RBP eCLIP7.47□□□□□ -1.21
TPM3-215ENST00000469717 TUSC3Q13454 348 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 NHLRC3Q5JS37 347 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 CD276Q5ZPR3 534 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 NHLRC1Q6VVB1 395 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 C2orf73Q8N5S3 287 aaPredicted RBP7.47□□□□□ -1.21
TPM3-215ENST00000469717 OR5D16Q8NGK9 328 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 ASB12Q8WXK4 309 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 FGF11Q92914 225 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 PTP4A1Q93096 173 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 HTATIP2Q9BUP3 242 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 SMG9Q9H0W8 520 aaKnown RBP7.47□□□□□ -1.21
TPM3-215ENST00000469717 DPAGT1Q9H3H5 408 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 LYARQ9NX58 379 aaKnown RBP7.47□□□□□ -1.21
TPM3-215ENST00000469717 PTGFRNQ9P2B2 879 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 OR2W5A6NFC9 320 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 ZNF98A6NK75 572 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 A8MVJ9 347 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 ARHGEF33A8MVX0 844 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 ANHXE9PGG2 379 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 PRMT3O60678 531 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 CXCL14O95715 111 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 EGFP01133 1207 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 KLK1P06870 262 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 SULT1A3P0DMM9 295 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 SULT1A4P0DMN0 295 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 ACP2P11117 423 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 CYBAP13498 195 aa7.47□□□□□ -1.21
TPM3-215ENST00000469717 STXBP1P61764 594 aaKnown RBP7.47□□□□□ -1.21
TPM3-215ENST00000469717 DUSP6Q16828 381 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms