RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 HSPB11Q9Y547 144 aa14.22□□□□□ -0.13
LIMS2-213ENST00000469300 MARF1Q9Y4F3 1742 aaKnown RBP14.22□□□□□ -0.13
LIMS2-213ENST00000469300 PSMD9O00233 223 aa14.22□□□□□ -0.13
LIMS2-213ENST00000469300 EIF1AYO14602 144 aaKnown RBP14.22□□□□□ -0.13
LIMS2-213ENST00000469300 SNAP29O95721 258 aa14.22□□□□□ -0.13
LIMS2-213ENST00000469300 ERCC1P07992 297 aaPredicted RBP14.22□□□□□ -0.13
LIMS2-213ENST00000469300 CPMP14384 443 aa14.22□□□□□ -0.13
LIMS2-213ENST00000469300 HOXD12P35452 270 aa14.22□□□□□ -0.13
LIMS2-213ENST00000469300 CCR5P51681 352 aa14.22□□□□□ -0.13
LIMS2-213ENST00000469300 RAB38P57729 211 aa14.22□□□□□ -0.13
LIMS2-213ENST00000469300 ZNF627Q7L945 461 aa14.22□□□□□ -0.13
LIMS2-213ENST00000469300 SLC44A3Q8N4M1 653 aa14.22□□□□□ -0.13
LIMS2-213ENST00000469300 OR14L1PQ8NHC6 308 aa14.22□□□□□ -0.13
LIMS2-213ENST00000469300 TRUB1Q8WWH5 349 aaKnown RBP14.22□□□□□ -0.13
LIMS2-213ENST00000469300 AKAP1Q92667 903 aaKnown RBP eCLIP14.22□□□□□ -0.13
LIMS2-213ENST00000469300 TUBA1CQ9BQE3 449 aa14.22□□□□□ -0.13
LIMS2-213ENST00000469300 OR2B2Q9GZK3 357 aa14.22□□□□□ -0.13
LIMS2-213ENST00000469300 SLC6A15Q9H2J7 730 aa14.22□□□□□ -0.13
LIMS2-213ENST00000469300 IL21Q9HBE4 155 aa14.22□□□□□ -0.13
LIMS2-213ENST00000469300 SSC5DA1L4H1 1573 aa14.22□□□□□ -0.13
LIMS2-213ENST00000469300 UBR3Q6ZT12 1888 aa14.22□□□□□ -0.13
LIMS2-213ENST00000469300 SLCO4C1Q6ZQN7 724 aa14.22□□□□□ -0.13
LIMS2-213ENST00000469300 LNX2Q8N448 690 aa14.22□□□□□ -0.13
LIMS2-213ENST00000469300 SECISBP2Q96T21 854 aaKnown RBP14.22□□□□□ -0.13
LIMS2-213ENST00000469300 UCKL1Q9NWZ5 548 aa14.22□□□□□ -0.13
LIMS2-213ENST00000469300 TBC1D24Q9ULP9 559 aa14.22□□□□□ -0.13
LIMS2-213ENST00000469300 ERVK-19Q9WJR5 959 aa14.22□□□□□ -0.13
LIMS2-213ENST00000469300 MEMO1Q9Y316 297 aa14.22□□□□□ -0.13
LIMS2-213ENST00000469300 TLCD2A6NGC4 264 aa14.21□□□□□ -0.13
LIMS2-213ENST00000469300 H3BUI4 141 aa14.21□□□□□ -0.13
LIMS2-213ENST00000469300 PVRP15151 417 aa14.21□□□□□ -0.13
LIMS2-213ENST00000469300 CAPZA1P52907 286 aa14.21□□□□□ -0.13
LIMS2-213ENST00000469300 HSD11B2P80365 405 aa14.21□□□□□ -0.13
LIMS2-213ENST00000469300 CD83Q01151 205 aa14.21□□□□□ -0.13
LIMS2-213ENST00000469300 GALNTL5Q7Z4T8 443 aa14.21□□□□□ -0.13
LIMS2-213ENST00000469300 GALNT10Q86SR1 603 aa14.21□□□□□ -0.13
LIMS2-213ENST00000469300 OR14A16Q8NHC5 309 aa14.21□□□□□ -0.13
LIMS2-213ENST00000469300 SETD6Q8TBK2 473 aa14.21□□□□□ -0.13
LIMS2-213ENST00000469300 MYADMQ96S97 322 aa14.21□□□□□ -0.13
LIMS2-213ENST00000469300 LMF2Q9BU23 707 aaKnown RBP14.21□□□□□ -0.13
LIMS2-213ENST00000469300 CA5BQ9Y2D0 317 aa14.21□□□□□ -0.13
LIMS2-213ENST00000469300 DOCK1Q14185 1865 aa14.21□□□□□ -0.13
LIMS2-213ENST00000469300 ACVR1Q04771 509 aa14.21□□□□□ -0.13
LIMS2-213ENST00000469300 HSD17B12Q53GQ0 312 aa14.21□□□□□ -0.13
LIMS2-213ENST00000469300 ASRGL1Q7L266 308 aa14.21□□□□□ -0.13
LIMS2-213ENST00000469300 DEFB123Q8N688 67 aa14.21□□□□□ -0.13
LIMS2-213ENST00000469300 OR2L3Q8NG85 312 aa14.21□□□□□ -0.13
LIMS2-213ENST00000469300 TMEM181Q9P2C4 612 aa14.21□□□□□ -0.13
LIMS2-213ENST00000469300 FTCDNL1E5RQL4 147 aa14.21□□□□□ -0.13
LIMS2-213ENST00000469300 OSMP13725 252 aa14.21□□□□□ -0.13
LIMS2-213ENST00000469300 CR2P20023 1033 aa14.21□□□□□ -0.13
LIMS2-213ENST00000469300 GCAP28676 217 aa14.21□□□□□ -0.13
LIMS2-213ENST00000469300 GTDC1Q4AE62 458 aa14.21□□□□□ -0.13
LIMS2-213ENST00000469300 TMEM184AQ6ZMB5 413 aa14.21□□□□□ -0.13
LIMS2-213ENST00000469300 ISL2Q96A47 359 aa14.21□□□□□ -0.13
LIMS2-213ENST00000469300 RXFP3Q9NSD7 469 aa14.21□□□□□ -0.13
LIMS2-213ENST00000469300 KCNK5O95279 499 aa14.21□□□□□ -0.14
LIMS2-213ENST00000469300 GPLD1P80108 840 aa14.21□□□□□ -0.14
LIMS2-213ENST00000469300 REEP5Q00765 189 aa14.21□□□□□ -0.14
LIMS2-213ENST00000469300 CMPK2Q5EBM0 449 aa14.21□□□□□ -0.14
LIMS2-213ENST00000469300 TRIM61Q5EBN2 209 aa14.21□□□□□ -0.14
LIMS2-213ENST00000469300 LRRC69Q6ZNQ3 347 aa14.21□□□□□ -0.14
LIMS2-213ENST00000469300 S100A16Q96FQ6 103 aaKnown RBP14.21□□□□□ -0.14
LIMS2-213ENST00000469300 BTBD2Q9BX70 525 aa14.21□□□□□ -0.14
LIMS2-213ENST00000469300 SLC7A11Q9UPY5 501 aa14.21□□□□□ -0.14
LIMS2-213ENST00000469300 EVPLQ92817 2033 aa14.21□□□□□ -0.14
LIMS2-213ENST00000469300 A6NHS1 94 aa14.2□□□□□ -0.14
LIMS2-213ENST00000469300 PSKH1P11801 424 aa14.2□□□□□ -0.14
LIMS2-213ENST00000469300 ZNF43P17038 809 aa14.2□□□□□ -0.14
LIMS2-213ENST00000469300 ADPRHP54922 357 aa14.2□□□□□ -0.14
LIMS2-213ENST00000469300 DCAF12Q5T6F0 453 aa14.2□□□□□ -0.14
LIMS2-213ENST00000469300 ENPP6Q6UWR7 440 aa14.2□□□□□ -0.14
LIMS2-213ENST00000469300 VTCN1Q7Z7D3 282 aa14.2□□□□□ -0.14
LIMS2-213ENST00000469300 DTWD1Q8N5C7 304 aa14.2□□□□□ -0.14
LIMS2-213ENST00000469300 ZNF578Q96N58 590 aaPredicted RBP14.2□□□□□ -0.14
LIMS2-213ENST00000469300 ZNF300Q96RE9 604 aaPredicted RBP14.2□□□□□ -0.14
LIMS2-213ENST00000469300 PHOX2BQ99453 314 aa14.2□□□□□ -0.14
LIMS2-213ENST00000469300 SEMA6CQ9H3T2 930 aa14.2□□□□□ -0.14
LIMS2-213ENST00000469300 VAPAQ9P0L0 249 aa14.2□□□□□ -0.14
LIMS2-213ENST00000469300 KIAA1551Q9HCM1 1747 aa14.2□□□□□ -0.14
LIMS2-213ENST00000469300 NSG1A0A0A6YYJ2 146 aa14.2□□□□□ -0.14
LIMS2-213ENST00000469300 A6NIZ1 184 aa14.2□□□□□ -0.14
LIMS2-213ENST00000469300 SOCS2O14508 198 aa14.2□□□□□ -0.14
LIMS2-213ENST00000469300 CCNOP22674 350 aa14.2□□□□□ -0.14
LIMS2-213ENST00000469300 RAP1BP61224 184 aa14.2□□□□□ -0.14
LIMS2-213ENST00000469300 RAP1AP62834 184 aa14.2□□□□□ -0.14
LIMS2-213ENST00000469300 Q6ZNB5 142 aa14.2□□□□□ -0.14
LIMS2-213ENST00000469300 MS4A15Q8N5U1 240 aa14.2□□□□□ -0.14
LIMS2-213ENST00000469300 CIDECQ96AQ7 238 aaPredicted RBP14.2□□□□□ -0.14
LIMS2-213ENST00000469300 SFXN2Q96NB2 322 aa14.2□□□□□ -0.14
LIMS2-213ENST00000469300 CNN2Q99439 309 aaKnown RBP14.2□□□□□ -0.14
LIMS2-213ENST00000469300 WDR77Q9BQA1 342 aaPredicted RBP14.2□□□□□ -0.14
LIMS2-213ENST00000469300 GORASP2Q9H8Y8 452 aa14.2□□□□□ -0.14
LIMS2-213ENST00000469300 CDRT1O95170 752 aa14.2□□□□□ -0.14
LIMS2-213ENST00000469300 CELP19835 753 aa14.2□□□□□ -0.14
LIMS2-213ENST00000469300 NPR2P20594 1047 aa14.2□□□□□ -0.14
LIMS2-213ENST00000469300 ABCA11PQ4W5N1 156 aa14.2□□□□□ -0.14
LIMS2-213ENST00000469300 NLRP8Q86W28 1048 aa14.2□□□□□ -0.14
LIMS2-213ENST00000469300 UEVLDQ8IX04 471 aa14.2□□□□□ -0.14
LIMS2-213ENST00000469300 NANOS1Q8WY41 292 aaKnown RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms