RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 CBLCQ9ULV8 474 aa17.36■□□□□ 0.37
COL7A1-207ENST00000467985 ABCG2Q9UNQ0 655 aa17.36■□□□□ 0.37
COL7A1-207ENST00000467985 FIS1Q9Y3D6 152 aa17.36■□□□□ 0.37
COL7A1-207ENST00000467985 TRAF6Q9Y4K3 522 aa17.36■□□□□ 0.37
COL7A1-207ENST00000467985 PTGDR2Q9Y5Y4 395 aa17.36■□□□□ 0.37
COL7A1-207ENST00000467985 SPG11Q96JI7 2443 aa17.35■□□□□ 0.37
COL7A1-207ENST00000467985 MBD3L4A6NDZ8 208 aaPredicted RBP17.35■□□□□ 0.37
COL7A1-207ENST00000467985 MBD3L3A6NE82 208 aaPredicted RBP17.35■□□□□ 0.37
COL7A1-207ENST00000467985 MBD3L5A6NJ08 208 aaPredicted RBP17.35■□□□□ 0.37
COL7A1-207ENST00000467985 LSM1O15116 133 aaKnown RBP17.35■□□□□ 0.37
COL7A1-207ENST00000467985 ATP8B1O43520 1251 aa17.35■□□□□ 0.37
COL7A1-207ENST00000467985 LINC00032P0C843 101 aa17.35■□□□□ 0.37
COL7A1-207ENST00000467985 BMP5P22003 454 aa17.35■□□□□ 0.37
COL7A1-207ENST00000467985 GRK2P25098 689 aa17.35■□□□□ 0.37
COL7A1-207ENST00000467985 EVI2BP34910 448 aa17.35■□□□□ 0.37
COL7A1-207ENST00000467985 ASMTP46597 345 aa17.35■□□□□ 0.37
COL7A1-207ENST00000467985 RPL38P63173 70 aaKnown RBP17.35■□□□□ 0.37
COL7A1-207ENST00000467985 MYBPHQ13203 477 aa17.35■□□□□ 0.37
COL7A1-207ENST00000467985 VPS26BQ4G0F5 336 aa17.35■□□□□ 0.37
COL7A1-207ENST00000467985 ARL13AQ5H913 290 aaPredicted RBP17.35■□□□□ 0.37
COL7A1-207ENST00000467985 SH2D4BQ5SQS7 431 aa17.35■□□□□ 0.37
COL7A1-207ENST00000467985 DCST1Q5T197 706 aa17.35■□□□□ 0.37
COL7A1-207ENST00000467985 AGBL2Q5U5Z8 902 aa17.35■□□□□ 0.37
COL7A1-207ENST00000467985 DDIASQ8IXT1 998 aa17.35■□□□□ 0.37
COL7A1-207ENST00000467985 OR4N2Q8NGD1 307 aa17.35■□□□□ 0.37
COL7A1-207ENST00000467985 OR2T11Q8NH01 316 aa17.35■□□□□ 0.37
COL7A1-207ENST00000467985 MBD3L2Q8NHZ7 208 aaPredicted RBP17.35■□□□□ 0.37
COL7A1-207ENST00000467985 PPCDCQ96CD2 204 aa17.35■□□□□ 0.37
COL7A1-207ENST00000467985 MTERF3Q96E29 417 aa17.35■□□□□ 0.37
COL7A1-207ENST00000467985 ZBED6CLQ96FA7 236 aaPredicted RBP17.35■□□□□ 0.37
COL7A1-207ENST00000467985 TUBB1Q9H4B7 451 aa17.35■□□□□ 0.37
COL7A1-207ENST00000467985 REEP4Q9H6H4 257 aa17.35■□□□□ 0.37
COL7A1-207ENST00000467985 SLC17A7Q9P2U7 560 aa17.35■□□□□ 0.37
COL7A1-207ENST00000467985 DKKL1Q9UK85 242 aa17.35■□□□□ 0.37
COL7A1-207ENST00000467985 SYT5O00445 386 aa17.34■□□□□ 0.37
COL7A1-207ENST00000467985 SPAG7O75391 227 aa17.34■□□□□ 0.37
COL7A1-207ENST00000467985 SDC1P18827 310 aa17.34■□□□□ 0.37
COL7A1-207ENST00000467985 MAPK1P28482 360 aa17.34■□□□□ 0.37
COL7A1-207ENST00000467985 GPC1P35052 558 aa17.34■□□□□ 0.37
COL7A1-207ENST00000467985 CLK3P49761 638 aaKnown RBP17.34■□□□□ 0.37
COL7A1-207ENST00000467985 ASCL1P50553 236 aa17.34■□□□□ 0.37
COL7A1-207ENST00000467985 GAS1P54826 345 aa17.34■□□□□ 0.37
COL7A1-207ENST00000467985 GFRA1P56159 465 aa17.34■□□□□ 0.37
COL7A1-207ENST00000467985 MAGOHP61326 146 aaKnown RBP17.34■□□□□ 0.37
COL7A1-207ENST00000467985 FBXL19-AS1Q494R0 122 aa17.34■□□□□ 0.37
COL7A1-207ENST00000467985 RFTN2Q52LD8 501 aaPredicted RBP17.34■□□□□ 0.37
COL7A1-207ENST00000467985 ARSKQ6UWY0 536 aa17.34■□□□□ 0.37
COL7A1-207ENST00000467985 R3HCC1LQ7Z5L2 792 aaKnown RBP17.34■□□□□ 0.37
COL7A1-207ENST00000467985 TRIM42Q8IWZ5 723 aa17.34■□□□□ 0.37
COL7A1-207ENST00000467985 NAXEQ8NCW5 288 aa17.34■□□□□ 0.37
COL7A1-207ENST00000467985 OR4K17Q8NGC6 315 aa17.34■□□□□ 0.37
COL7A1-207ENST00000467985 CEP70Q8NHQ1 597 aa17.34■□□□□ 0.37
COL7A1-207ENST00000467985 TCP10LQ8TDR4 215 aa17.34■□□□□ 0.37
COL7A1-207ENST00000467985 TWIST2Q8WVJ9 160 aa17.34■□□□□ 0.37
COL7A1-207ENST00000467985 GFM2Q969S9 779 aaKnown RBP17.34■□□□□ 0.37
COL7A1-207ENST00000467985 LMF2Q9BU23 707 aaKnown RBP17.34■□□□□ 0.37
COL7A1-207ENST00000467985 KCNK9Q9NPC2 374 aa17.34■□□□□ 0.37
COL7A1-207ENST00000467985 FAM120CQ9NX05 1096 aaKnown RBP17.34■□□□□ 0.37
COL7A1-207ENST00000467985 PPP4R1LQ9P1A2 415 aa17.34■□□□□ 0.37
COL7A1-207ENST00000467985 FOXD3Q9UJU5 478 aaPredicted RBP17.34■□□□□ 0.37
COL7A1-207ENST00000467985 FBXL2Q9UKC9 423 aa17.34■□□□□ 0.37
COL7A1-207ENST00000467985 ACTL7BQ9Y614 415 aa17.34■□□□□ 0.37
COL7A1-207ENST00000467985 TMEM114B3SHH9 223 aa17.33■□□□□ 0.36
COL7A1-207ENST00000467985 H0Y3Z8 333 aa17.33■□□□□ 0.36
COL7A1-207ENST00000467985 FADS1O60427 444 aa17.33■□□□□ 0.36
COL7A1-207ENST00000467985 IL33O95760 270 aa17.33■□□□□ 0.36
COL7A1-207ENST00000467985 CHRNGP07510 517 aa17.33■□□□□ 0.36
COL7A1-207ENST00000467985 PRPS2P11908 318 aa17.33■□□□□ 0.36
COL7A1-207ENST00000467985 CHMP24386 653 aa17.33■□□□□ 0.36
COL7A1-207ENST00000467985 CTSSP25774 331 aa17.33■□□□□ 0.36
COL7A1-207ENST00000467985 DPP4P27487 766 aa17.33■□□□□ 0.36
COL7A1-207ENST00000467985 OPRM1P35372 400 aa17.33■□□□□ 0.36
COL7A1-207ENST00000467985 MANFP55145 182 aaKnown RBP17.33■□□□□ 0.36
COL7A1-207ENST00000467985 DLX5P56178 289 aa17.33■□□□□ 0.36
COL7A1-207ENST00000467985 DSCR4P56555 118 aaPredicted RBP17.33■□□□□ 0.36
COL7A1-207ENST00000467985 KRTAP10-9P60411 292 aa17.33■□□□□ 0.36
COL7A1-207ENST00000467985 HSPB3Q12988 150 aa17.33■□□□□ 0.36
COL7A1-207ENST00000467985 GAB1Q13480 694 aa17.33■□□□□ 0.36
COL7A1-207ENST00000467985 PDE7AQ13946 482 aa17.33■□□□□ 0.36
COL7A1-207ENST00000467985 UGT3A2Q3SY77 523 aa17.33■□□□□ 0.36
COL7A1-207ENST00000467985 GALNTL6Q49A17 601 aa17.33■□□□□ 0.36
COL7A1-207ENST00000467985 ZNF551Q7Z340 670 aaPredicted RBP17.33■□□□□ 0.36
COL7A1-207ENST00000467985 CDH24Q86UP0 819 aa17.33■□□□□ 0.36
COL7A1-207ENST00000467985 EXOC3L1Q86VI1 746 aa17.33■□□□□ 0.36
COL7A1-207ENST00000467985 RELL2Q8NC24 303 aaPredicted RBP17.33■□□□□ 0.36
COL7A1-207ENST00000467985 ATP6V1G3Q96LB4 118 aa17.33■□□□□ 0.36
COL7A1-207ENST00000467985 PPP3R2Q96LZ3 170 aa17.33■□□□□ 0.36
COL7A1-207ENST00000467985 SFXN2Q96NB2 322 aa17.33■□□□□ 0.36
COL7A1-207ENST00000467985 ZFP3Q96NJ6 502 aa17.33■□□□□ 0.36
COL7A1-207ENST00000467985 TSSK3Q96PN8 268 aa17.33■□□□□ 0.36
COL7A1-207ENST00000467985 TM9SF2Q99805 663 aa17.33■□□□□ 0.36
COL7A1-207ENST00000467985 MECRQ9BV79 373 aa17.33■□□□□ 0.36
COL7A1-207ENST00000467985 HHATLQ9HCP6 504 aa17.33■□□□□ 0.36
COL7A1-207ENST00000467985 ACSS1Q9NUB1 689 aaPredicted RBP17.33■□□□□ 0.36
COL7A1-207ENST00000467985 L3MBTL1Q9Y468 752 aa17.33■□□□□ 0.36
COL7A1-207ENST00000467985 HIVEP1P15822 2718 aa17.32■□□□□ 0.36
COL7A1-207ENST00000467985 HMGB1P1B2RPK0 211 aaPredicted RBP17.32■□□□□ 0.36
COL7A1-207ENST00000467985 KDM4EB2RXH2 506 aaPredicted RBP17.32■□□□□ 0.36
COL7A1-207ENST00000467985 PIP5K1BO14986 540 aa17.32■□□□□ 0.36
COL7A1-207ENST00000467985 AKAP10O43572 662 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms