RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 CAPS2Q9BXY5 557 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 PCDHAC1Q9H158 963 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 ANKHQ9HCJ1 492 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 ACKR4Q9NPB9 350 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 NECTIN3Q9NQS3 549 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 DEPPQ9NTK1 212 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 CHMP5Q9NZZ3 219 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 KIF17Q9P2E2 1029 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 LPAR3Q9UBY5 353 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 PCDHGB4Q9UN71 923 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 PPIEQ9UNP9 301 aaKnown RBP4.96□□□□□ -1.62
PTCD3-207ENST00000467273 ERVK-11Q9UQG0 969 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 MTO1Q9Y2Z2 717 aaKnown RBP4.96□□□□□ -1.62
PTCD3-207ENST00000467273 CHST2Q9Y4C5 530 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 SLC22A7Q9Y694 548 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 PRSS21Q9Y6M0 314 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 HEATR5BQ9P2D3 2071 aa4.96□□□□□ -1.62
PTCD3-207ENST00000467273 RAI1Q7Z5J4 1906 aaPredicted RBP4.95□□□□□ -1.62
PTCD3-207ENST00000467273 CTAGE9A4FU28 777 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 CD8B2A6NJW9 211 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 FAM166BA8MTA8 275 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 A8MV72 311 aaPredicted RBP4.95□□□□□ -1.62
PTCD3-207ENST00000467273 DIRC3C9JPN6 131 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 UBE2CO00762 179 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 P2RX6O15547 441 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 NOL3O60936 208 aaKnown RBP4.95□□□□□ -1.62
PTCD3-207ENST00000467273 KERAO60938 352 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 ZNF254O75437 659 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 ERAL1O75616 437 aaKnown RBP4.95□□□□□ -1.62
PTCD3-207ENST00000467273 SCAF4O95104 1147 aaKnown RBP4.95□□□□□ -1.62
PTCD3-207ENST00000467273 FHP07954 510 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 RHOXF2BP0C7M4 288 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 CHMP24386 653 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 MSNP26038 577 aaKnown RBP4.95□□□□□ -1.62
PTCD3-207ENST00000467273 FOXN2P32314 431 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 RPA3P35244 121 aaPredicted RBP4.95□□□□□ -1.62
PTCD3-207ENST00000467273 SOX6P35712 828 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 SERPINF1P36955 418 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 MAGEA5P43359 124 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 ZNF136P52737 540 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 UBE2HP62256 183 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 TNK1Q13470 666 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 CAPRIN1Q14444 709 aaKnown RBP4.95□□□□□ -1.62
PTCD3-207ENST00000467273 HERC3Q15034 1050 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 ADIPOQQ15848 244 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 TSTQ16762 297 aaKnown RBP4.95□□□□□ -1.62
PTCD3-207ENST00000467273 CD300EQ496F6 205 aaPredicted RBP4.95□□□□□ -1.62
PTCD3-207ENST00000467273 ACSF3Q4G176 576 aaPredicted RBP4.95□□□□□ -1.62
PTCD3-207ENST00000467273 NSUN5P2Q63ZY6 315 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 RTL4Q6ZR62 310 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 SLC26A11Q86WA9 606 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 ADGRG3Q86Y34 549 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 RFX6Q8HWS3 928 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 CCDC28AQ8IWP9 274 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 KLHDC8BQ8IXV7 354 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 LINC00469Q8N7U9 141 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 CAMKVQ8NCB2 501 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 APCDD1LQ8NCL9 501 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 B3GNT7Q8NFL0 401 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 CFAP61Q8NHU2 1237 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 LINC01560Q8TB33 94 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 FAM216AQ8WUB2 273 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 IGFBPL1Q8WX77 278 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 P3H4Q92791 437 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 NRBF2Q96F24 287 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 QKIQ96PU8 341 aaKnown RBP eCLIP4.95□□□□□ -1.62
PTCD3-207ENST00000467273 PANX3Q96QZ0 392 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 ATP6V0BQ99437 205 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 RHOXF2Q9BQY4 288 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 CCDC77Q9BR77 488 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 C1orf21Q9H246 121 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 FAM114A2Q9NRY5 505 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 ZNF226Q9NYT6 803 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 UBAP1Q9NZ09 502 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 HCN3Q9P1Z3 774 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 PCYOX1Q9UHG3 505 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 TTC7AQ9ULT0 858 aaPredicted RBP4.95□□□□□ -1.62
PTCD3-207ENST00000467273 DRG1Q9Y295 367 aaKnown RBP4.95□□□□□ -1.62
PTCD3-207ENST00000467273 LIPGQ9Y5X9 500 aa4.95□□□□□ -1.62
PTCD3-207ENST00000467273 DSCAMO60469 2012 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 IGKV3D-11A0A0A0MRZ8 115 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 PINLYPA6NC86 204 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 ZAR1LA6NP61 321 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 EEF1E1-BLOC1S5C9J1V9 151 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 E7ENX8 843 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 CCL22O00626 93 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 CTIFO43310 598 aaKnown RBP4.94□□□□□ -1.62
PTCD3-207ENST00000467273 EEF1E1O43324 174 aaKnown RBP4.94□□□□□ -1.62
PTCD3-207ENST00000467273 ZFAND5O76080 213 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 PGM3O95394 542 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 H2AFZP0C0S5 128 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 SLC35G6P0C7Q6 338 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 PECAM1P16284 738 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-207ENST00000467273 EGR1P18146 543 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 IL1RNP18510 177 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 HNMTP50135 292 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 ANXA11P50995 505 aaKnown RBP4.94□□□□□ -1.62
PTCD3-207ENST00000467273 NR0B1P51843 470 aaKnown RBP4.94□□□□□ -1.62
PTCD3-207ENST00000467273 ADARP55265 1226 aaKnown RBP4.94□□□□□ -1.62
PTCD3-207ENST00000467273 HTD2P86397 168 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms