RNA–Protein interactions for RNA: ENST00000466415.1

VPS16-206, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS16, Length 708 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-206ENST00000466415 MTHFD2LQ9H903 347 aaPredicted RBP11.24□□□□□ -0.61
VPS16-206ENST00000466415 GPN2Q9H9Y4 310 aaPredicted RBP11.24□□□□□ -0.61
VPS16-206ENST00000466415 NKX1-2Q9UD57 310 aaPredicted RBP11.24□□□□□ -0.61
VPS16-206ENST00000466415 IFT52Q9Y366 437 aa11.24□□□□□ -0.61
VPS16-206ENST00000466415 DSPPQ9NZW4 1301 aa11.24□□□□□ -0.61
VPS16-206ENST00000466415 KIF26BQ2KJY2 2108 aa11.24□□□□□ -0.61
VPS16-206ENST00000466415 NUP214P35658 2090 aaPredicted RBP11.23□□□□□ -0.61
VPS16-206ENST00000466415 LOC101059948A0A1B0GTJ6 334 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.23□□□□□ -0.61
VPS16-206ENST00000466415 PEX12O00623 359 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 SOCS6O14544 535 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 GNGT2O14610 69 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 ACOX3O15254 700 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 HS6ST1O60243 411 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 KIAA0513O60268 411 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 ZFAND5O76080 213 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 MFN2O95140 757 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 LDLRP01130 860 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 MT-ND1P03886 318 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 DBIP07108 87 aaKnown RBP11.23□□□□□ -0.61
VPS16-206ENST00000466415 PABPC4LP0CB38 370 aaKnown RBP11.23□□□□□ -0.61
VPS16-206ENST00000466415 LIPCP11150 499 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 DRD5P21918 477 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 PIGAP37287 484 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 RNF4P78317 190 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 FOXC1Q12948 553 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 LARS2Q15031 903 aaKnown RBP11.23□□□□□ -0.61
VPS16-206ENST00000466415 LIN52Q52LA3 116 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 EIPR1Q53HC9 387 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 NDUFAF7Q7L592 441 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 ERMP1Q7Z2K6 904 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 HMGN2P46Q86SG4 172 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 ZDHHC21Q8IVQ6 265 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 TAGAPQ8N103 731 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 ZNF614Q8N883 585 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 BCORP1Q8N888 145 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 APCDD1LQ8NCL9 501 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 PAPD5Q8NDF8 572 aaKnown RBP11.23□□□□□ -0.61
VPS16-206ENST00000466415 C17orf47Q8NEP4 570 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 OR4N2Q8NGD1 307 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 NUBPLQ8TB37 319 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 LRTOMTQ8WZ04 291 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 PMM1Q92871 262 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 ADIPOR1Q96A54 375 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 HSPBAP1Q96EW2 488 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 ZNF354BQ96LW1 612 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 PKP2Q99959 881 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 MESP1Q9BRJ9 268 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 PINK1Q9BXM7 581 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 DEFB126Q9BYW3 111 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 QRSL1Q9H0R6 528 aaKnown RBP11.23□□□□□ -0.61
VPS16-206ENST00000466415 ARMC7Q9H6L4 198 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 ASCL3Q9NQ33 180 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 KLHL28Q9NXS3 571 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 PPIEQ9UNP9 301 aaKnown RBP11.23□□□□□ -0.61
VPS16-206ENST00000466415 ZNF232Q9UNY5 417 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 ZNF443Q9Y2A4 671 aaPredicted RBP11.23□□□□□ -0.61
VPS16-206ENST00000466415 SLC9A8Q9Y2E8 581 aa11.23□□□□□ -0.61
VPS16-206ENST00000466415 NPIPA5A0A0B4J1W7 369 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 NPIPA7E9PJI5 369 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 hCG_2039718K7EN88 272 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 FCMRO60667 390 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 DEAF1O75398 565 aaPredicted RBP11.22□□□□□ -0.61
VPS16-206ENST00000466415 DXOO77932 396 aaKnown RBP11.22□□□□□ -0.61
VPS16-206ENST00000466415 CST1P01037 141 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 IFNW1P05000 195 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 FESP07332 822 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 THBS1P07996 1170 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 GUSBP08236 651 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 NPIPA8P0DM63 369 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 IL7RP16871 459 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 ITGA2P17301 1181 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 CD247P20963 164 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 PRKAR1BP31321 381 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 DCTP40126 519 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 KCNJ5P48544 419 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 GPR143P51810 404 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 CRYBA2P53672 197 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 KCNJ10P78508 379 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 KCNC4Q03721 635 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 TRIP10Q15642 601 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.22□□□□□ -0.61
VPS16-206ENST00000466415 KIRREL2Q6UWL6 708 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 PPP1R32Q7Z5V6 425 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 VRK2Q86Y07 508 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 SLC34A3Q8N130 599 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 OR11G2Q8NGC1 345 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 OR8K3Q8NH51 312 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 M1APQ8TC57 530 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 FAM110BQ8TC76 370 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 THAP3Q8WTV1 239 aaPredicted RBP11.22□□□□□ -0.61
VPS16-206ENST00000466415 NKD1Q969G9 470 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 TMBIM1Q969X1 311 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 TP53INP1Q96A56 240 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 NACC2Q96BF6 587 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 EFHD2Q96C19 240 aaPredicted RBP11.22□□□□□ -0.61
VPS16-206ENST00000466415 VCX3BQ9H321 246 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 ZNF160Q9HCG1 818 aa11.22□□□□□ -0.61
VPS16-206ENST00000466415 ZNF223Q9UK11 482 aaPredicted RBP11.22□□□□□ -0.61
VPS16-206ENST00000466415 SH3GLB1Q9Y371 365 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms