RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 ODF2LQ9ULJ1 636 aa3.16□□□□□ -1.9
LRCH3-211ENST00000466054 EIF3LQ9Y262 564 aaKnown RBP3.16□□□□□ -1.9
LRCH3-211ENST00000466054 MTF2Q9Y483 593 aaPredicted RBP3.16□□□□□ -1.9
LRCH3-211ENST00000466054 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.16□□□□□ -1.9
LRCH3-211ENST00000466054 ADAMTS9Q9P2N4 1935 aa3.16□□□□□ -1.9
LRCH3-211ENST00000466054 CUX2O14529 1486 aa3.16□□□□□ -1.9
LRCH3-211ENST00000466054 RNF222A6NCQ9 220 aa3.15□□□□□ -1.91
LRCH3-211ENST00000466054 SLC2A10O95528 541 aa3.15□□□□□ -1.91
LRCH3-211ENST00000466054 ALPIP09923 528 aa3.15□□□□□ -1.91
LRCH3-211ENST00000466054 GDF1P27539 372 aa3.15□□□□□ -1.91
LRCH3-211ENST00000466054 HTR5AP47898 357 aa3.15□□□□□ -1.91
LRCH3-211ENST00000466054 RPS6P62753 249 aaKnown RBP3.15□□□□□ -1.91
LRCH3-211ENST00000466054 CD47Q08722 323 aa3.15□□□□□ -1.91
LRCH3-211ENST00000466054 TGIF1Q15583 401 aa3.15□□□□□ -1.91
LRCH3-211ENST00000466054 QRICH1Q2TAL8 776 aa3.15□□□□□ -1.91
LRCH3-211ENST00000466054 PNCKQ6P2M8 343 aa3.15□□□□□ -1.91
LRCH3-211ENST00000466054 SYVN1Q86TM6 617 aa3.15□□□□□ -1.91
LRCH3-211ENST00000466054 UNC5CLQ8IV45 518 aa3.15□□□□□ -1.91
LRCH3-211ENST00000466054 GPR137CQ8N3F9 429 aa3.15□□□□□ -1.91
LRCH3-211ENST00000466054 BCORP1Q8N888 145 aa3.15□□□□□ -1.91
LRCH3-211ENST00000466054 NFAM1Q8NET5 270 aaPredicted RBP3.15□□□□□ -1.91
LRCH3-211ENST00000466054 ANKRD20A12PQ8NF67 263 aa3.15□□□□□ -1.91
LRCH3-211ENST00000466054 ART4Q93070 314 aa3.15□□□□□ -1.91
LRCH3-211ENST00000466054 ROPN1Q9HAT0 212 aaPredicted RBP3.15□□□□□ -1.91
LRCH3-211ENST00000466054 POLD4Q9HCU8 107 aa3.15□□□□□ -1.91
LRCH3-211ENST00000466054 USP6P35125 1406 aa3.14□□□□□ -1.91
LRCH3-211ENST00000466054 NCAPD2Q15021 1401 aa3.14□□□□□ -1.91
LRCH3-211ENST00000466054 FAM230AA0A1W2PPH8 454 aa3.14□□□□□ -1.91
LRCH3-211ENST00000466054 TOM1L1O75674 476 aa3.14□□□□□ -1.91
LRCH3-211ENST00000466054 IGFBP1P08833 259 aaPredicted RBP3.14□□□□□ -1.91
LRCH3-211ENST00000466054 GIG44P09565 113 aaPredicted RBP3.14□□□□□ -1.91
LRCH3-211ENST00000466054 SLC35E2P0CK97 266 aa3.14□□□□□ -1.91
LRCH3-211ENST00000466054 RRASP10301 218 aa3.14□□□□□ -1.91
LRCH3-211ENST00000466054 IL1RL1Q01638 556 aa3.14□□□□□ -1.91
LRCH3-211ENST00000466054 PRKCEQ02156 737 aa3.14□□□□□ -1.91
LRCH3-211ENST00000466054 PUDPQ08623 228 aa3.14□□□□□ -1.91
LRCH3-211ENST00000466054 SPP2Q13103 211 aa3.14□□□□□ -1.91
LRCH3-211ENST00000466054 IL18R1Q13478 541 aa3.14□□□□□ -1.91
LRCH3-211ENST00000466054 ASAH1Q13510 395 aa3.14□□□□□ -1.91
LRCH3-211ENST00000466054 CYP51A1Q16850 503 aa3.14□□□□□ -1.91
LRCH3-211ENST00000466054 TTC31Q49AM3 519 aaPredicted RBP3.14□□□□□ -1.91
LRCH3-211ENST00000466054 PAN3Q58A45 887 aaKnown RBP3.14□□□□□ -1.91
LRCH3-211ENST00000466054 DCST2Q5T1A1 773 aa3.14□□□□□ -1.91
LRCH3-211ENST00000466054 SLC22A10Q63ZE4 541 aa3.14□□□□□ -1.91
LRCH3-211ENST00000466054 BTNL3Q6UXE8 466 aa3.14□□□□□ -1.91
LRCH3-211ENST00000466054 TMEM184AQ6ZMB5 413 aa3.14□□□□□ -1.91
LRCH3-211ENST00000466054 PARGQ86W56 976 aa3.14□□□□□ -1.91
LRCH3-211ENST00000466054 ZNF584Q8IVC4 421 aa3.14□□□□□ -1.91
LRCH3-211ENST00000466054 GIPC3Q8TF64 312 aa3.14□□□□□ -1.91
LRCH3-211ENST00000466054 ADIPOR1Q96A54 375 aa3.14□□□□□ -1.91
LRCH3-211ENST00000466054 TADA1Q96BN2 335 aa3.14□□□□□ -1.91
LRCH3-211ENST00000466054 DEFB126Q9BYW3 111 aa3.14□□□□□ -1.91
LRCH3-211ENST00000466054 KRT23Q9C075 422 aa3.14□□□□□ -1.91
LRCH3-211ENST00000466054 KAT8Q9H7Z6 458 aaKnown RBP3.14□□□□□ -1.91
LRCH3-211ENST00000466054 LPAR2Q9HBW0 351 aa3.14□□□□□ -1.91
LRCH3-211ENST00000466054 VAT1LQ9HCJ6 419 aa3.14□□□□□ -1.91
LRCH3-211ENST00000466054 ZNF275Q9NSD4 429 aaPredicted RBP3.14□□□□□ -1.91
LRCH3-211ENST00000466054 VNN3Q9NY84 501 aa3.14□□□□□ -1.91
LRCH3-211ENST00000466054 EHFQ9NZC4 300 aa3.14□□□□□ -1.91
LRCH3-211ENST00000466054 Q9UF83 564 aa3.14□□□□□ -1.91
LRCH3-211ENST00000466054 CFAP65Q6ZU64 1925 aaKnown RBP3.14□□□□□ -1.91
LRCH3-211ENST00000466054 WASHC1A8K0Z3 465 aa3.13□□□□□ -1.91
LRCH3-211ENST00000466054 KLLNB2CW77 178 aa3.13□□□□□ -1.91
LRCH3-211ENST00000466054 WASH3PC4AMC7 463 aa3.13□□□□□ -1.91
LRCH3-211ENST00000466054 H0YL77 283 aa3.13□□□□□ -1.91
LRCH3-211ENST00000466054 NUDT21O43809 227 aaKnown RBP3.13□□□□□ -1.91
LRCH3-211ENST00000466054 ANXA4P09525 319 aaPredicted RBP3.13□□□□□ -1.91
LRCH3-211ENST00000466054 KRTAP1-4P0C5Y4 121 aa3.13□□□□□ -1.91
LRCH3-211ENST00000466054 H2AFXP16104 143 aaPredicted RBP3.13□□□□□ -1.91
LRCH3-211ENST00000466054 IDSP22304 550 aa3.13□□□□□ -1.91
LRCH3-211ENST00000466054 IGHV1-2P23083 117 aa3.13□□□□□ -1.91
LRCH3-211ENST00000466054 PRKAR2BP31323 418 aa3.13□□□□□ -1.91
LRCH3-211ENST00000466054 ACVR1BP36896 505 aa3.13□□□□□ -1.91
LRCH3-211ENST00000466054 GMFBP60983 142 aa3.13□□□□□ -1.91
LRCH3-211ENST00000466054 IGLV3-21P80748 117 aaPredicted RBP3.13□□□□□ -1.91
LRCH3-211ENST00000466054 SERTAD2Q14140 314 aa3.13□□□□□ -1.91
LRCH3-211ENST00000466054 KARSQ15046 597 aaKnown RBP3.13□□□□□ -1.91
LRCH3-211ENST00000466054 CDKN3Q16667 212 aa3.13□□□□□ -1.91
LRCH3-211ENST00000466054 FHL5Q5TD97 284 aa3.13□□□□□ -1.91
LRCH3-211ENST00000466054 WASH2PQ6VEQ5 465 aa3.13□□□□□ -1.91
LRCH3-211ENST00000466054 MCHR2Q969V1 340 aa3.13□□□□□ -1.91
LRCH3-211ENST00000466054 FAF2Q96CS3 445 aa3.13□□□□□ -1.91
LRCH3-211ENST00000466054 ELMO2Q96JJ3 720 aa3.13□□□□□ -1.91
LRCH3-211ENST00000466054 CNOT6LQ96LI5 555 aaKnown RBP3.13□□□□□ -1.91
LRCH3-211ENST00000466054 CASD1Q96PB1 797 aa3.13□□□□□ -1.91
LRCH3-211ENST00000466054 FEM1AQ9BSK4 669 aa3.13□□□□□ -1.91
LRCH3-211ENST00000466054 DPH7Q9BTV6 452 aa3.13□□□□□ -1.91
LRCH3-211ENST00000466054 TBC1D10AQ9BXI6 508 aa3.13□□□□□ -1.91
LRCH3-211ENST00000466054 SLITRK2Q9H156 845 aa3.13□□□□□ -1.91
LRCH3-211ENST00000466054 NGBQ9NPG2 151 aa3.13□□□□□ -1.91
LRCH3-211ENST00000466054 MEPEQ9NQ76 525 aaPredicted RBP3.13□□□□□ -1.91
LRCH3-211ENST00000466054 B4GALT7Q9UBV7 327 aa3.13□□□□□ -1.91
LRCH3-211ENST00000466054 FOXJ3Q9UPW0 622 aa3.13□□□□□ -1.91
LRCH3-211ENST00000466054 CLCA3PQ9Y6N3 262 aa3.13□□□□□ -1.91
LRCH3-211ENST00000466054 KIF25-AS1Q9Y6Z4 181 aa3.13□□□□□ -1.91
LRCH3-211ENST00000466054 ABCC4O15439 1325 aa3.13□□□□□ -1.91
LRCH3-211ENST00000466054 CCDC7Q96M83 1385 aa3.12□□□□□ -1.91
LRCH3-211ENST00000466054 ANKRD30BLA7E2S9 258 aa3.12□□□□□ -1.91
LRCH3-211ENST00000466054 PPIHO43447 177 aaKnown RBP3.12□□□□□ -1.91
LRCH3-211ENST00000466054 JCHAINP01591 159 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms