RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 ARHGAP9Q9BRR9 750 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 KIR3DX1Q9H7L2 352 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 NEK6Q9HC98 313 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 OR6C2Q9NZP2 312 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 CLCA2Q9UQC9 943 aa17.15■□□□□ 0.34
SYNE4-204ENST00000465425 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 TBC1D3DA0A087WVF3 549 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 TBC1D3IA0A087WXS9 549 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 TBC1D3EA0A087X179 549 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 TBC1D3KA0A087X1G2 549 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 SMIM30A4D0T7 59 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 TBC1D3FA6NER0 549 aaPredicted RBP17.14■□□□□ 0.33
SYNE4-204ENST00000465425 TBC1D3LB9A6J9 549 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 RNGTTO60942 597 aaKnown RBP17.14■□□□□ 0.33
SYNE4-204ENST00000465425 CA3P07451 260 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 TBC1D3HP0C7X1 549 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 LIMS3P0CW19 117 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 LIMS4P0CW20 117 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 FPR3P25089 353 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 STAT5AP42229 794 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 SLC1A3P43003 542 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 NR4A2P43354 598 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 GPR4P46093 362 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 GPR50Q13585 617 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 DECR1Q16698 335 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 TBC1D3GQ6DHY5 549 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 TBC1D3CQ6IPX1 549 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 QSOX2Q6ZRP7 698 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 NRMQ8IXM6 262 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 TBC1D3Q8IZP1 549 aaPredicted RBP17.14■□□□□ 0.33
SYNE4-204ENST00000465425 LRRC25Q8N386 305 aaPredicted RBP17.14■□□□□ 0.33
SYNE4-204ENST00000465425 SLC16A11Q8NCK7 471 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 GIMAP5Q96F15 307 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 SLC35A4Q96G79 324 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 MS4A4EQ96PG1 132 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 KATNB1Q9BVA0 655 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 CHST2Q9Y4C5 530 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 C2orf16Q68DN1 1984 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 BTN3A3O00478 584 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 SLC31A1O15431 190 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 LRRTM2O43300 516 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 AGR2O95994 175 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 SLC35G6P0C7Q6 338 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 ZNF888P0CJ79 500 aaPredicted RBP17.14■□□□□ 0.33
SYNE4-204ENST00000465425 ATP6V1E1P36543 226 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 ERVK-21P61565 698 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 RPS15AP62244 130 aaKnown RBP17.14■□□□□ 0.33
SYNE4-204ENST00000465425 DSG2Q14126 1118 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 GLYR1Q49A26 553 aaPredicted RBP17.14■□□□□ 0.33
SYNE4-204ENST00000465425 ZFP41Q8N8Y5 198 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 SYT14Q8NB59 555 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 CAPSLQ8WWF8 208 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 SLC41A3Q96GZ6 507 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 PLA2G2FQ9BZM2 168 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 MIXL1Q9H2W2 232 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 FGF22Q9HCT0 170 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 ZNF232Q9UNY5 417 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 NTNG1Q9Y2I2 539 aa17.14■□□□□ 0.33
SYNE4-204ENST00000465425 SF3B6Q9Y3B4 125 aaKnown RBP17.14■□□□□ 0.33
SYNE4-204ENST00000465425 CASKO14936 926 aa17.13■□□□□ 0.33
SYNE4-204ENST00000465425 SURF4O15260 269 aa17.13■□□□□ 0.33
SYNE4-204ENST00000465425 RFX2P48378 723 aa17.13■□□□□ 0.33
SYNE4-204ENST00000465425 FABP5Q01469 135 aa17.13■□□□□ 0.33
SYNE4-204ENST00000465425 NXNL2Q5VZ03 156 aa17.13■□□□□ 0.33
SYNE4-204ENST00000465425 MFSD12Q6NUT3 480 aa17.13■□□□□ 0.33
SYNE4-204ENST00000465425 FAM111BQ6SJ93 734 aa17.13■□□□□ 0.33
SYNE4-204ENST00000465425 PEX5LQ8IYB4 626 aa17.13■□□□□ 0.33
SYNE4-204ENST00000465425 GDPD1Q8N9F7 314 aa17.13■□□□□ 0.33
SYNE4-204ENST00000465425 POGLUT1Q8NBL1 392 aa17.13■□□□□ 0.33
SYNE4-204ENST00000465425 ARMC5Q96C12 935 aa17.13■□□□□ 0.33
SYNE4-204ENST00000465425 ZNF486Q96H40 463 aaPredicted RBP17.13■□□□□ 0.33
SYNE4-204ENST00000465425 MKRN2Q9H000 416 aaKnown RBP17.13■□□□□ 0.33
SYNE4-204ENST00000465425 MTIF3Q9H2K0 278 aaKnown RBP17.13■□□□□ 0.33
SYNE4-204ENST00000465425 C6orf106Q9H6K1 298 aaPredicted RBP17.13■□□□□ 0.33
SYNE4-204ENST00000465425 KRCC1Q9NPI7 259 aaPredicted RBP17.13■□□□□ 0.33
SYNE4-204ENST00000465425 IL20Q9NYY1 176 aa17.13■□□□□ 0.33
SYNE4-204ENST00000465425 NLGN3Q9NZ94 848 aa17.13■□□□□ 0.33
SYNE4-204ENST00000465425 H2AFY2Q9P0M6 372 aaPredicted RBP17.13■□□□□ 0.33
SYNE4-204ENST00000465425 ZNF443Q9Y2A4 671 aaPredicted RBP17.13■□□□□ 0.33
SYNE4-204ENST00000465425 WDR45Q9Y484 360 aa17.13■□□□□ 0.33
SYNE4-204ENST00000465425 PRSS38A1L453 326 aa17.13■□□□□ 0.33
SYNE4-204ENST00000465425 CHST10O43529 356 aa17.13■□□□□ 0.33
SYNE4-204ENST00000465425 PLRG1O43660 514 aaKnown RBP17.13■□□□□ 0.33
SYNE4-204ENST00000465425 CPN2P22792 545 aa17.13■□□□□ 0.33
SYNE4-204ENST00000465425 PYDC2Q56P42 97 aa17.13■□□□□ 0.33
SYNE4-204ENST00000465425 FBXO46Q6PJ61 603 aaPredicted RBP17.13■□□□□ 0.33
SYNE4-204ENST00000465425 FRRS1Q6ZNA5 592 aa17.13■□□□□ 0.33
SYNE4-204ENST00000465425 GDF7Q7Z4P5 450 aa17.13■□□□□ 0.33
SYNE4-204ENST00000465425 ASPGQ86U10 573 aa17.13■□□□□ 0.33
SYNE4-204ENST00000465425 SAMD14Q8IZD0 417 aaPredicted RBP17.13■□□□□ 0.33
SYNE4-204ENST00000465425 FAM181AQ8N9Y4 354 aa17.13■□□□□ 0.33
SYNE4-204ENST00000465425 OR7G2Q8NG99 324 aa17.13■□□□□ 0.33
SYNE4-204ENST00000465425 OR4F15Q8NGB8 312 aa17.13■□□□□ 0.33
SYNE4-204ENST00000465425 CDS1Q92903 461 aa17.13■□□□□ 0.33
SYNE4-204ENST00000465425 OR2M4Q96R27 311 aa17.13■□□□□ 0.33
SYNE4-204ENST00000465425 KXD1Q9BQD3 176 aa17.13■□□□□ 0.33
SYNE4-204ENST00000465425 MCOLN1Q9GZU1 580 aa17.13■□□□□ 0.33
SYNE4-204ENST00000465425 SLC22A4Q9H015 551 aa17.13■□□□□ 0.33
SYNE4-204ENST00000465425 MTHFD2LQ9H903 347 aaPredicted RBP17.13■□□□□ 0.33
SYNE4-204ENST00000465425 CERS4Q9HA82 394 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms