RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 BEST3Q8N1M1 668 aa16.07■□□□□ 0.16
CPSF4-209ENST00000465132 MIPOL1Q8TD10 442 aa16.07■□□□□ 0.16
CPSF4-209ENST00000465132 NUDT8Q8WV74 236 aa16.07■□□□□ 0.16
CPSF4-209ENST00000465132 JADE3Q92613 823 aa16.07■□□□□ 0.16
CPSF4-209ENST00000465132 VSTM2LQ96N03 204 aa16.07■□□□□ 0.16
CPSF4-209ENST00000465132 HOPXQ9BPY8 73 aaPredicted RBP16.07■□□□□ 0.16
CPSF4-209ENST00000465132 LMF2Q9BU23 707 aaKnown RBP16.07■□□□□ 0.16
CPSF4-209ENST00000465132 G6PC3Q9BUM1 346 aa16.07■□□□□ 0.16
CPSF4-209ENST00000465132 CDCP1Q9H5V8 836 aa16.07■□□□□ 0.16
CPSF4-209ENST00000465132 TPT1P8Q9HAU6 139 aa16.07■□□□□ 0.16
CPSF4-209ENST00000465132 EQTNQ9NQ60 294 aa16.07■□□□□ 0.16
CPSF4-209ENST00000465132 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.07■□□□□ 0.16
CPSF4-209ENST00000465132 SH3BGRL2Q9UJC5 107 aa16.07■□□□□ 0.16
CPSF4-209ENST00000465132 GPR55Q9Y2T6 319 aaPredicted RBP16.07■□□□□ 0.16
CPSF4-209ENST00000465132 PCDHGB6Q9Y5F9 930 aa16.07■□□□□ 0.16
CPSF4-209ENST00000465132 MYO7BQ6PIF6 2116 aa16.07■□□□□ 0.16
CPSF4-209ENST00000465132 TP53I11O14683 189 aa16.06■□□□□ 0.16
CPSF4-209ENST00000465132 TO15178 435 aa16.06■□□□□ 0.16
CPSF4-209ENST00000465132 ITGA10O75578 1167 aa16.06■□□□□ 0.16
CPSF4-209ENST00000465132 ESRRAP11474 423 aaPredicted RBP16.06■□□□□ 0.16
CPSF4-209ENST00000465132 MATN1P21941 496 aa16.06■□□□□ 0.16
CPSF4-209ENST00000465132 HTR1EP28566 365 aa16.06■□□□□ 0.16
CPSF4-209ENST00000465132 LCN1P31025 176 aa16.06■□□□□ 0.16
CPSF4-209ENST00000465132 CBX1P83916 185 aa16.06■□□□□ 0.16
CPSF4-209ENST00000465132 LASP1Q14847 261 aaKnown RBP16.06■□□□□ 0.16
CPSF4-209ENST00000465132 DECR1Q16698 335 aa16.06■□□□□ 0.16
CPSF4-209ENST00000465132 ZNF630Q2M218 657 aaPredicted RBP16.06■□□□□ 0.16
CPSF4-209ENST00000465132 PIGGQ5H8A4 983 aa16.06■□□□□ 0.16
CPSF4-209ENST00000465132 SAXO2Q658L1 398 aa16.06■□□□□ 0.16
CPSF4-209ENST00000465132 FCRLBQ6BAA4 426 aa16.06■□□□□ 0.16
CPSF4-209ENST00000465132 REP15Q6BDI9 236 aa16.06■□□□□ 0.16
CPSF4-209ENST00000465132 KIF2BQ8N4N8 673 aa16.06■□□□□ 0.16
CPSF4-209ENST00000465132 ZNF321PQ8N8H1 164 aa16.06■□□□□ 0.16
CPSF4-209ENST00000465132 OR5AK3PQ8NH89 298 aa16.06■□□□□ 0.16
CPSF4-209ENST00000465132 GPR151Q8TDV0 419 aa16.06■□□□□ 0.16
CPSF4-209ENST00000465132 ASB15Q8WXK1 588 aa16.06■□□□□ 0.16
CPSF4-209ENST00000465132 SLC9A6Q92581 669 aa16.06■□□□□ 0.16
CPSF4-209ENST00000465132 UTP23Q9BRU9 249 aaKnown RBP16.06■□□□□ 0.16
CPSF4-209ENST00000465132 INPP5KQ9BT40 448 aa16.06■□□□□ 0.16
CPSF4-209ENST00000465132 ITPAQ9BY32 194 aa16.06■□□□□ 0.16
CPSF4-209ENST00000465132 PAIP1Q9H074 479 aaKnown RBP16.06■□□□□ 0.16
CPSF4-209ENST00000465132 PIGUQ9H490 435 aa16.06■□□□□ 0.16
CPSF4-209ENST00000465132 CHST11Q9NPF2 352 aa16.06■□□□□ 0.16
CPSF4-209ENST00000465132 PCDHB14Q9Y5E9 798 aa16.06■□□□□ 0.16
CPSF4-209ENST00000465132 GMEB1Q9Y692 573 aa16.06■□□□□ 0.16
CPSF4-209ENST00000465132 CLIC1O00299 241 aa16.05■□□□□ 0.16
CPSF4-209ENST00000465132 HS6ST1O60243 411 aa16.05■□□□□ 0.16
CPSF4-209ENST00000465132 SLC19A2O60779 497 aa16.05■□□□□ 0.16
CPSF4-209ENST00000465132 HNRNPCL1O60812 293 aaKnown RBP16.05■□□□□ 0.16
CPSF4-209ENST00000465132 CLPSP04118 112 aa16.05■□□□□ 0.16
CPSF4-209ENST00000465132 GSNP06396 782 aa16.05■□□□□ 0.16
CPSF4-209ENST00000465132 POU3F2P20265 443 aaPredicted RBP16.05■□□□□ 0.16
CPSF4-209ENST00000465132 TRHRP34981 398 aaPredicted RBP16.05■□□□□ 0.16
CPSF4-209ENST00000465132 PTGER1P34995 402 aa16.05■□□□□ 0.16
CPSF4-209ENST00000465132 PTGER4P35408 488 aa16.05■□□□□ 0.16
CPSF4-209ENST00000465132 CYB561P49447 251 aa16.05■□□□□ 0.16
CPSF4-209ENST00000465132 NR0B1P51843 470 aaKnown RBP16.05■□□□□ 0.16
CPSF4-209ENST00000465132 CASP6P55212 293 aa16.05■□□□□ 0.16
CPSF4-209ENST00000465132 HPCAP84074 193 aa16.05■□□□□ 0.16
CPSF4-209ENST00000465132 PAGE3Q5JUK9 113 aa16.05■□□□□ 0.16
CPSF4-209ENST00000465132 HACD2Q6Y1H2 254 aa16.05■□□□□ 0.16
CPSF4-209ENST00000465132 DNAJC14Q6Y2X3 702 aaPredicted RBP16.05■□□□□ 0.16
CPSF4-209ENST00000465132 SLC44A2Q8IWA5 706 aaPredicted RBP16.05■□□□□ 0.16
CPSF4-209ENST00000465132 FITM2Q8N6M3 262 aa16.05■□□□□ 0.16
CPSF4-209ENST00000465132 COX18Q8N8Q8 333 aa16.05■□□□□ 0.16
CPSF4-209ENST00000465132 ZNF441Q8N8Z8 693 aa16.05■□□□□ 0.16
CPSF4-209ENST00000465132 MDS2Q8NDY4 140 aa16.05■□□□□ 0.16
CPSF4-209ENST00000465132 DOK4Q8TEW6 326 aa16.05■□□□□ 0.16
CPSF4-209ENST00000465132 ZFP90Q8TF47 636 aa16.05■□□□□ 0.16
CPSF4-209ENST00000465132 THAP3Q8WTV1 239 aaPredicted RBP16.05■□□□□ 0.16
CPSF4-209ENST00000465132 ADIPOR1Q96A54 375 aa16.05■□□□□ 0.16
CPSF4-209ENST00000465132 LRRC58Q96CX6 371 aa16.05■□□□□ 0.16
CPSF4-209ENST00000465132 NSL1Q96IY1 281 aa16.05■□□□□ 0.16
CPSF4-209ENST00000465132 SGCZQ96LD1 299 aa16.05■□□□□ 0.16
CPSF4-209ENST00000465132 CGREF1Q99674 301 aa16.05■□□□□ 0.16
CPSF4-209ENST00000465132 GPATCH2Q9NW75 528 aa16.05■□□□□ 0.16
CPSF4-209ENST00000465132 ZNF223Q9UK11 482 aaPredicted RBP16.05■□□□□ 0.16
CPSF4-209ENST00000465132 LIPT1Q9Y234 373 aa16.05■□□□□ 0.16
CPSF4-209ENST00000465132 APCP25054 2843 aa16.05■□□□□ 0.16
CPSF4-209ENST00000465132 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 ASPDHA6ND91 283 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 A8MVJ9 347 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 WWP2O00308 870 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 OR2J2O76002 312 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 NKX2-2O95096 273 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 CALB2P22676 271 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 IL12BP29460 328 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 GABRA3P34903 492 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 CDKN2CP42773 168 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 CRATP43155 626 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 HLCSP50747 726 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 MXRA7P84157 204 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 PLCXD2Q0VAA5 305 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 TUBA3CQ13748 450 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 EFR3AQ14156 821 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 C3AR1Q16581 482 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 TUBA3EQ6PEY2 450 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 GDF7Q7Z4P5 450 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 METTL25Q8N6Q8 603 aa16.04■□□□□ 0.16
CPSF4-209ENST00000465132 OR8J3Q8NGG0 315 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms