RNA–Protein interactions for RNA: ENST00000463741.1

SREBF2-205, Transcript of sterol regulatory element binding transcription factor 2, human

TSL 2

Gene SREBF2, Length 634 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF2-205	ENST00000463741	CLDN20	P56880	219 aa		13.57	□□□□□ -0.24
SREBF2-205	ENST00000463741	MRPS22	P82650	360 aa	Known RBP	13.57	□□□□□ -0.24
SREBF2-205	ENST00000463741	C2orf54	Q08AI8	447 aa		13.57	□□□□□ -0.24
SREBF2-205	ENST00000463741	ZNF155	Q12901	538 aa	Predicted RBP	13.57	□□□□□ -0.24
SREBF2-205	ENST00000463741	SH2D4B	Q5SQS7	431 aa		13.57	□□□□□ -0.24
SREBF2-205	ENST00000463741	LETMD1	Q6P1Q0	360 aa		13.57	□□□□□ -0.24
SREBF2-205	ENST00000463741	FAM214B	Q7L5A3	538 aa		13.57	□□□□□ -0.24
SREBF2-205	ENST00000463741	SLC44A2	Q8IWA5	706 aa	Predicted RBP	13.57	□□□□□ -0.24
SREBF2-205	ENST00000463741	FADS6	Q8N9I5	356 aa		13.57	□□□□□ -0.24
SREBF2-205	ENST00000463741	OR2M3	Q8NG83	312 aa		13.57	□□□□□ -0.24
SREBF2-205	ENST00000463741	STMN4	Q9H169	189 aa	Predicted RBP	13.57	□□□□□ -0.24
SREBF2-205	ENST00000463741	KCNF1	Q9H3M0	494 aa		13.57	□□□□□ -0.24
SREBF2-205	ENST00000463741	MED11	Q9P086	117 aa		13.57	□□□□□ -0.24
SREBF2-205	ENST00000463741	RNF14	Q9UBS8	474 aa		13.57	□□□□□ -0.24
SREBF2-205	ENST00000463741	ZNF337	Q9Y3M9	751 aa		13.57	□□□□□ -0.24
SREBF2-205	ENST00000463741	SON	P18583	2426 aa	Known RBP	13.56	□□□□□ -0.24
SREBF2-205	ENST00000463741	CHD3	Q12873	2000 aa	Known RBP	13.56	□□□□□ -0.24
SREBF2-205	ENST00000463741	ROS1	P08922	2347 aa		13.56	□□□□□ -0.24
SREBF2-205	ENST00000463741	OR2M5	A3KFT3	312 aa		13.56	□□□□□ -0.24
SREBF2-205	ENST00000463741	OTC	P00480	354 aa		13.56	□□□□□ -0.24
SREBF2-205	ENST00000463741	PLAU	P00749	431 aa		13.56	□□□□□ -0.24
SREBF2-205	ENST00000463741	THBD	P07204	575 aa		13.56	□□□□□ -0.24
SREBF2-205	ENST00000463741	IL3	P08700	152 aa		13.56	□□□□□ -0.24
SREBF2-205	ENST00000463741	FCGR2A	P12318	317 aa		13.56	□□□□□ -0.24
SREBF2-205	ENST00000463741	RPS3A	P61247	264 aa	Known RBP	13.56	□□□□□ -0.24
SREBF2-205	ENST00000463741	PSPH	P78330	225 aa		13.56	□□□□□ -0.24
SREBF2-205	ENST00000463741	KRTAP1-1	Q07627	177 aa		13.56	□□□□□ -0.24
SREBF2-205	ENST00000463741	DMTN	Q08495	405 aa		13.56	□□□□□ -0.24
SREBF2-205	ENST00000463741	GANAB	Q14697	944 aa	Known RBP	13.56	□□□□□ -0.24
SREBF2-205	ENST00000463741	SGCB	Q16585	318 aa		13.56	□□□□□ -0.24
SREBF2-205	ENST00000463741	MAPK1IP1L	Q8NDC0	245 aa		13.56	□□□□□ -0.24
SREBF2-205	ENST00000463741	IGFBPL1	Q8WX77	278 aa		13.56	□□□□□ -0.24
SREBF2-205	ENST00000463741	NANOS1	Q8WY41	292 aa	Known RBP	13.56	□□□□□ -0.24
SREBF2-205	ENST00000463741	GFM2	Q969S9	779 aa	Known RBP	13.56	□□□□□ -0.24
SREBF2-205	ENST00000463741	ERP27	Q96DN0	273 aa		13.56	□□□□□ -0.24
SREBF2-205	ENST00000463741	MTBP	Q96DY7	904 aa		13.56	□□□□□ -0.24
SREBF2-205	ENST00000463741	BRF2	Q9HAW0	419 aa		13.56	□□□□□ -0.24
SREBF2-205	ENST00000463741	NMRK1	Q9NWW6	199 aa		13.56	□□□□□ -0.24
SREBF2-205	ENST00000463741	TMCO1	Q9UM00	188 aa		13.56	□□□□□ -0.24
SREBF2-205	ENST00000463741	SNX6	Q9UNH7	406 aa		13.56	□□□□□ -0.24
SREBF2-205	ENST00000463741	UTP11	Q9Y3A2	253 aa	Known RBP	13.56	□□□□□ -0.24
SREBF2-205	ENST00000463741	USF3	Q68DE3	2245 aa		13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	GNG14	A0A1W2PPG7	69 aa		13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	PPP6C	O00743	305 aa		13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	GMFG	O60234	142 aa		13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	AQP8	O94778	261 aa		13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	PLG	P00747	810 aa	Predicted RBP	13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	RPS17	P08708	135 aa	Known RBP	13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	RBP1	P09455	135 aa		13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	CTAGE8	P0CG41	777 aa		13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	TRA2B	P62995	288 aa	Known RBP	13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	CAV1	Q03135	178 aa		13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	TNK1	Q13470	666 aa		13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	VEZF1	Q14119	521 aa		13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	GUSBP1	Q15486	140 aa		13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	TCHHL1	Q5QJ38	904 aa	Predicted RBP	13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	ZDHHC24	Q6UX98	284 aa		13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	WFDC8	Q8IUA0	241 aa		13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	CTAGE4	Q8IX94	777 aa		13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	SPATA4	Q8NEY3	305 aa		13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	OR7G2	Q8NG99	324 aa		13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	UHMK1	Q8TAS1	419 aa	Known RBP	13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	PLPPR2	Q96GM1	343 aa		13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	PRRG4	Q9BZD6	226 aa		13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	PTGES2	Q9H7Z7	377 aa		13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	GIMAP4	Q9NUV9	329 aa		13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	ZNF701	Q9NV72	531 aa	Predicted RBP	13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	TAS2R9	Q9NYW1	312 aa		13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	FLRT3	Q9NZU0	649 aa		13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	CLEC4A	Q9UMR7	237 aa		13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	EMC9	Q9Y3B6	208 aa		13.55	□□□□□ -0.24
SREBF2-205	ENST00000463741	RNF223	E7ERA6	249 aa		13.54	□□□□□ -0.24
SREBF2-205	ENST00000463741	LINC01387	J3KSC0	135 aa		13.54	□□□□□ -0.24
SREBF2-205	ENST00000463741	HS3ST1	O14792	307 aa		13.54	□□□□□ -0.24
SREBF2-205	ENST00000463741	KLF4	O43474	513 aa		13.54	□□□□□ -0.24
SREBF2-205	ENST00000463741	PCDH7	O60245	1069 aa		13.54	□□□□□ -0.24
SREBF2-205	ENST00000463741	OR4F21	O95013	312 aa		13.54	□□□□□ -0.24
SREBF2-205	ENST00000463741	PAX1	P15863	534 aa		13.54	□□□□□ -0.24
SREBF2-205	ENST00000463741	RFX3	P48380	749 aa		13.54	□□□□□ -0.24
SREBF2-205	ENST00000463741	CDH13	P55290	713 aa		13.54	□□□□□ -0.24
SREBF2-205	ENST00000463741	CAPRIN1	Q14444	709 aa	Known RBP	13.54	□□□□□ -0.24
SREBF2-205	ENST00000463741	TRADD	Q15628	312 aa		13.54	□□□□□ -0.24
SREBF2-205	ENST00000463741	ALKBH2	Q6NS38	261 aa		13.54	□□□□□ -0.24
SREBF2-205	ENST00000463741	SAMD14	Q8IZD0	417 aa	Predicted RBP	13.54	□□□□□ -0.24
SREBF2-205	ENST00000463741	FAM9C	Q8IZT9	166 aa		13.54	□□□□□ -0.24
SREBF2-205	ENST00000463741	METTL25	Q8N6Q8	603 aa		13.54	□□□□□ -0.24
SREBF2-205	ENST00000463741	ZNF483	Q8TF39	744 aa	Predicted RBP	13.54	□□□□□ -0.24
SREBF2-205	ENST00000463741	C1GALT1C1	Q96EU7	318 aa		13.54	□□□□□ -0.24
SREBF2-205	ENST00000463741	RTN4R	Q9BZR6	473 aa		13.54	□□□□□ -0.24
SREBF2-205	ENST00000463741	RAB17	Q9H0T7	212 aa		13.54	□□□□□ -0.24
SREBF2-205	ENST00000463741	SDHAF3	Q9NRP4	125 aa		13.54	□□□□□ -0.24
SREBF2-205	ENST00000463741	VPS29	Q9UBQ0	182 aa		13.54	□□□□□ -0.24
SREBF2-205	ENST00000463741	MCM8	Q9UJA3	840 aa		13.54	□□□□□ -0.24
SREBF2-205	ENST00000463741	ABCG2	Q9UNQ0	655 aa		13.54	□□□□□ -0.24
SREBF2-205	ENST00000463741	MXRA5	Q9NR99	2828 aa		13.54	□□□□□ -0.24
SREBF2-205	ENST00000463741	RNF212B	A8MTL3	300 aa		13.53	□□□□□ -0.24
SREBF2-205	ENST00000463741	SHISA8	B8ZZ34	492 aa		13.53	□□□□□ -0.24
SREBF2-205	ENST00000463741	EIF1AY	O14602	144 aa	Known RBP	13.53	□□□□□ -0.24
SREBF2-205	ENST00000463741	COQ9	O75208	318 aa		13.53	□□□□□ -0.24
SREBF2-205	ENST00000463741	PPP3CB	P16298	524 aa		13.53	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms