RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 HCRTR2O43614 444 aa18.63■□□□□ 0.57
PDLIM4-205ENST00000463615 NUDT17P0C025 328 aa18.63■□□□□ 0.57
PDLIM4-205ENST00000463615 DPP4P27487 766 aa18.63■□□□□ 0.57
PDLIM4-205ENST00000463615 MAP3K8P41279 467 aa18.63■□□□□ 0.57
PDLIM4-205ENST00000463615 FRKP42685 505 aaPredicted RBP18.63■□□□□ 0.57
PDLIM4-205ENST00000463615 DSCR4P56555 118 aaPredicted RBP18.63■□□□□ 0.57
PDLIM4-205ENST00000463615 CLDN18P56856 261 aa18.63■□□□□ 0.57
PDLIM4-205ENST00000463615 B3GALT5-AS1P59052 145 aa18.63■□□□□ 0.57
PDLIM4-205ENST00000463615 EEF1A1P68104 462 aaKnown RBP18.63■□□□□ 0.57
PDLIM4-205ENST00000463615 GAB1Q13480 694 aa18.63■□□□□ 0.57
PDLIM4-205ENST00000463615 DECR1Q16698 335 aa18.63■□□□□ 0.57
PDLIM4-205ENST00000463615 EEF1A1P5Q5VTE0 462 aa18.63■□□□□ 0.57
PDLIM4-205ENST00000463615 KANK2Q63ZY3 851 aa18.63■□□□□ 0.57
PDLIM4-205ENST00000463615 CLEC6AQ6EIG7 209 aa18.63■□□□□ 0.57
PDLIM4-205ENST00000463615 KIF18BQ86Y91 864 aa18.63■□□□□ 0.57
PDLIM4-205ENST00000463615 ZZZ3Q8IYH5 903 aa18.63■□□□□ 0.57
PDLIM4-205ENST00000463615 C4orf33Q8N1A6 199 aa18.63■□□□□ 0.57
PDLIM4-205ENST00000463615 BANPQ8N9N5 519 aa18.63■□□□□ 0.57
PDLIM4-205ENST00000463615 NINJ1Q92982 152 aa18.63■□□□□ 0.57
PDLIM4-205ENST00000463615 Q9N2J8 555 aa18.63■□□□□ 0.57
PDLIM4-205ENST00000463615 RASSF1Q9NS23 344 aa18.63■□□□□ 0.57
PDLIM4-205ENST00000463615 FAM120CQ9NX05 1096 aaKnown RBP18.63■□□□□ 0.57
PDLIM4-205ENST00000463615 NTMQ9P121 344 aa18.63■□□□□ 0.57
PDLIM4-205ENST00000463615 MRTO4Q9UKD2 239 aaKnown RBP18.63■□□□□ 0.57
PDLIM4-205ENST00000463615 CBLCQ9ULV8 474 aa18.63■□□□□ 0.57
PDLIM4-205ENST00000463615 TMED5Q9Y3A6 229 aa18.63■□□□□ 0.57
PDLIM4-205ENST00000463615 SMIM23A6NLE4 172 aa18.62■□□□□ 0.57
PDLIM4-205ENST00000463615 H0Y3Z8 333 aa18.62■□□□□ 0.57
PDLIM4-205ENST00000463615 IL33O95760 270 aa18.62■□□□□ 0.57
PDLIM4-205ENST00000463615 TMIGD3P0DMS9 266 aaPredicted RBP18.62■□□□□ 0.57
PDLIM4-205ENST00000463615 DNAJA1P31689 397 aaKnown RBP18.62■□□□□ 0.57
PDLIM4-205ENST00000463615 PDE7AQ13946 482 aa18.62■□□□□ 0.57
PDLIM4-205ENST00000463615 ZNHIT3Q15649 155 aaPredicted RBP18.62■□□□□ 0.57
PDLIM4-205ENST00000463615 TRABD2AQ86V40 505 aa18.62■□□□□ 0.57
PDLIM4-205ENST00000463615 OR2T11Q8NH01 316 aa18.62■□□□□ 0.57
PDLIM4-205ENST00000463615 APOPT1Q96IL0 206 aa18.62■□□□□ 0.57
PDLIM4-205ENST00000463615 SFXN2Q96NB2 322 aa18.62■□□□□ 0.57
PDLIM4-205ENST00000463615 ACBD3Q9H3P7 528 aa18.62■□□□□ 0.57
PDLIM4-205ENST00000463615 TUBB1Q9H4B7 451 aa18.62■□□□□ 0.57
PDLIM4-205ENST00000463615 ANKZF1Q9H8Y5 726 aa18.62■□□□□ 0.57
PDLIM4-205ENST00000463615 SDHAF3Q9NRP4 125 aa18.62■□□□□ 0.57
PDLIM4-205ENST00000463615 DNAJB12Q9NXW2 375 aaKnown RBP18.62■□□□□ 0.57
PDLIM4-205ENST00000463615 LGALS13Q9UHV8 139 aa18.62■□□□□ 0.57
PDLIM4-205ENST00000463615 DNAJC15Q9Y5T4 150 aa18.62■□□□□ 0.57
PDLIM4-205ENST00000463615 IGLV3-32A0A0A0MS00 114 aa18.61■□□□□ 0.57
PDLIM4-205ENST00000463615 CLCA1A8K7I4 914 aa18.61■□□□□ 0.57
PDLIM4-205ENST00000463615 LINC01387J3KSC0 135 aa18.61■□□□□ 0.57
PDLIM4-205ENST00000463615 NPHS1O60500 1241 aa18.61■□□□□ 0.57
PDLIM4-205ENST00000463615 GOSR1O95249 250 aa18.61■□□□□ 0.57
PDLIM4-205ENST00000463615 CD1EP15812 388 aa18.61■□□□□ 0.57
PDLIM4-205ENST00000463615 PSMD4P55036 377 aaKnown RBP18.61■□□□□ 0.57
PDLIM4-205ENST00000463615 GANABQ14697 944 aaKnown RBP18.61■□□□□ 0.57
PDLIM4-205ENST00000463615 OR2M3Q8NG83 312 aa18.61■□□□□ 0.57
PDLIM4-205ENST00000463615 OR4K17Q8NGC6 315 aa18.61■□□□□ 0.57
PDLIM4-205ENST00000463615 REEP4Q9H6H4 257 aa18.61■□□□□ 0.57
PDLIM4-205ENST00000463615 C3orf14Q9HBI5 128 aa18.61■□□□□ 0.57
PDLIM4-205ENST00000463615 PPP4R1LQ9P1A2 415 aa18.61■□□□□ 0.57
PDLIM4-205ENST00000463615 DKKL1Q9UK85 242 aa18.61■□□□□ 0.57
PDLIM4-205ENST00000463615 PTGDR2Q9Y5Y4 395 aa18.61■□□□□ 0.57
PDLIM4-205ENST00000463615 A6NNC1 897 aa18.6■□□□□ 0.57
PDLIM4-205ENST00000463615 LSM1O15116 133 aaKnown RBP18.6■□□□□ 0.57
PDLIM4-205ENST00000463615 PDPK1O15530 556 aa18.6■□□□□ 0.57
PDLIM4-205ENST00000463615 CHEK2O96017 543 aa18.6■□□□□ 0.57
PDLIM4-205ENST00000463615 SDC1P18827 310 aa18.6■□□□□ 0.57
PDLIM4-205ENST00000463615 PCYT1AP49585 367 aa18.6■□□□□ 0.57
PDLIM4-205ENST00000463615 STARP49675 285 aa18.6■□□□□ 0.57
PDLIM4-205ENST00000463615 DGKQP52824 942 aa18.6■□□□□ 0.57
PDLIM4-205ENST00000463615 FOXF2Q12947 444 aa18.6■□□□□ 0.57
PDLIM4-205ENST00000463615 UGT3A2Q3SY77 523 aa18.6■□□□□ 0.57
PDLIM4-205ENST00000463615 RFTN2Q52LD8 501 aaPredicted RBP18.6■□□□□ 0.57
PDLIM4-205ENST00000463615 OR5M10Q6IEU7 315 aa18.6■□□□□ 0.57
PDLIM4-205ENST00000463615 GOT1L1Q8NHS2 421 aaPredicted RBP18.6■□□□□ 0.57
PDLIM4-205ENST00000463615 MTERF3Q96E29 417 aa18.6■□□□□ 0.57
PDLIM4-205ENST00000463615 POLDIP3Q9BY77 421 aaKnown RBP18.6■□□□□ 0.57
PDLIM4-205ENST00000463615 IQCGQ9H095 443 aaKnown RBP18.6■□□□□ 0.57
PDLIM4-205ENST00000463615 ACSS1Q9NUB1 689 aaPredicted RBP18.6■□□□□ 0.57
PDLIM4-205ENST00000463615 AKAP6Q13023 2319 aa18.59■□□□□ 0.57
PDLIM4-205ENST00000463615 NKX2-2O95096 273 aa18.59■□□□□ 0.57
PDLIM4-205ENST00000463615 CRHP06850 196 aa18.59■□□□□ 0.57
PDLIM4-205ENST00000463615 EPXP11678 715 aa18.59■□□□□ 0.57
PDLIM4-205ENST00000463615 PRPS2P11908 318 aa18.59■□□□□ 0.57
PDLIM4-205ENST00000463615 PEPDP12955 493 aa18.59■□□□□ 0.57
PDLIM4-205ENST00000463615 SRYQ05066 204 aa18.59■□□□□ 0.57
PDLIM4-205ENST00000463615 SNTB1Q13884 538 aaKnown RBP18.59■□□□□ 0.57
PDLIM4-205ENST00000463615 GLYR1Q49A26 553 aaPredicted RBP18.59■□□□□ 0.57
PDLIM4-205ENST00000463615 SH2D4BQ5SQS7 431 aa18.59■□□□□ 0.57
PDLIM4-205ENST00000463615 ZNF551Q7Z340 670 aaPredicted RBP18.59■□□□□ 0.57
PDLIM4-205ENST00000463615 CEP70Q8NHQ1 597 aa18.59■□□□□ 0.57
PDLIM4-205ENST00000463615 ZFP28Q8NHY6 868 aa18.59■□□□□ 0.57
PDLIM4-205ENST00000463615 ZBED6CLQ96FA7 236 aaPredicted RBP18.59■□□□□ 0.57
PDLIM4-205ENST00000463615 RTN4RQ9BZR6 473 aa18.59■□□□□ 0.57
PDLIM4-205ENST00000463615 ROPN1BQ9BZX4 212 aaPredicted RBP18.59■□□□□ 0.57
PDLIM4-205ENST00000463615 CXXC4Q9H2H0 198 aa18.59■□□□□ 0.57
PDLIM4-205ENST00000463615 CLEC4MQ9H2X3 399 aaPredicted RBP18.59■□□□□ 0.57
PDLIM4-205ENST00000463615 PIGMQ9H3S5 423 aa18.59■□□□□ 0.57
PDLIM4-205ENST00000463615 DSN1Q9H410 356 aa18.59■□□□□ 0.57
PDLIM4-205ENST00000463615 ROPN1Q9HAT0 212 aaPredicted RBP18.59■□□□□ 0.57
PDLIM4-205ENST00000463615 HHATLQ9HCP6 504 aa18.59■□□□□ 0.57
PDLIM4-205ENST00000463615 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.58■□□□□ 0.56
PDLIM4-205ENST00000463615 TUBAL3A6NHL2 446 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms