RNA–Protein interactions for RNA: ENST00000462787.5

SMC4-204, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2 BASIC

Gene SMC4, Length 5,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-204ENST00000462787 FZD7O75084 574 aa14.97□□□□□ -0.01
SMC4-204ENST00000462787 GPR32O75388 356 aa14.97□□□□□ -0.01
SMC4-204ENST00000462787 NUDT7P0C024 238 aa14.97□□□□□ -0.01
SMC4-204ENST00000462787 ACP5P13686 325 aa14.97□□□□□ -0.01
SMC4-204ENST00000462787 GZMKP49863 264 aa14.97□□□□□ -0.01
SMC4-204ENST00000462787 CAV3P56539 151 aa14.97□□□□□ -0.01
SMC4-204ENST00000462787 CTF1Q16619 201 aa14.97□□□□□ -0.01
SMC4-204ENST00000462787 OR2G6Q5TZ20 316 aa14.97□□□□□ -0.01
SMC4-204ENST00000462787 PXKQ7Z7A4 578 aa14.97□□□□□ -0.01
SMC4-204ENST00000462787 MDGA1Q8NFP4 955 aa14.97□□□□□ -0.01
SMC4-204ENST00000462787 ARRDC2Q8TBH0 407 aa14.97□□□□□ -0.01
SMC4-204ENST00000462787 ACTL8Q9H568 366 aa14.97□□□□□ -0.01
SMC4-204ENST00000462787 KCNIP3Q9Y2W7 256 aa14.97□□□□□ -0.01
SMC4-204ENST00000462787 ANKRD12Q6UB98 2062 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 SMLR1H3BR10 107 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 SRCP12931 536 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 AKT2P31751 481 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 USP51Q70EK9 711 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 GJD2Q9UKL4 321 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 H3BSH0 61 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 KCNK5O95279 499 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 GASTP01350 101 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 ATXN1LP0C7T5 689 aaKnown RBP14.96□□□□□ -0.01
SMC4-204ENST00000462787 MTNR1BP49286 362 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 GPR143P51810 404 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 FKBP1BP68106 108 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 MAP4K2Q12851 820 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 GGTA1PQ4G0N0 100 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 GXYLT1Q4G148 440 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 ZNF529Q6P280 563 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 TRIM46Q7Z4K8 759 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 SLC25A46Q96AG3 418 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 TEX37Q96LM6 180 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 DDX31Q9H8H2 851 aaKnown RBP14.96□□□□□ -0.01
SMC4-204ENST00000462787 CNIH4Q9P003 139 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 TRBV23OR9-2A0A075B6M9 112 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 TPPPO94811 219 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 GSRP00390 522 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 PIPP12273 146 aaPredicted RBP14.96□□□□□ -0.01
SMC4-204ENST00000462787 DUSP6Q16828 381 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 TMEM35AQ53FP2 167 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 OR5T3Q8NGG3 340 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 OR14K1Q8NGZ2 314 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 SH3RF2Q8TEC5 729 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 SCAMP4Q969E2 229 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 EGLN2Q96KS0 407 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 PLAGL1Q9UM63 463 aa14.96□□□□□ -0.01
SMC4-204ENST00000462787 POM121CA8CG34 1229 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 H7C417 338 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 OR7A17O14581 309 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 AK1P00568 194 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 ARAFP10398 606 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 MAT2AP31153 395 aaKnown RBP14.95□□□□□ -0.02
SMC4-204ENST00000462787 KIAA1211LQ6NV74 962 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 PODNL1Q6PEZ8 512 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 HMGN2P46Q86SG4 172 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 METTL21AQ8WXB1 218 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 PRMT8Q9NR22 394 aaPredicted RBP14.95□□□□□ -0.02
SMC4-204ENST00000462787 NDRG2Q9UN36 371 aaKnown RBP14.95□□□□□ -0.02
SMC4-204ENST00000462787 CSNK1G3Q9Y6M4 447 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 TRDV1A0A1B0GX56 115 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 C2orf74A8MZ97 194 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 PHYHO14832 338 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 UBL3O95164 117 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 CCL23P55773 120 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 GFOD2Q3B7J2 385 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 ENPP7Q6UWV6 458 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 FAM83HQ6ZRV2 1179 aaPredicted RBP14.95□□□□□ -0.02
SMC4-204ENST00000462787 ASIC5Q9NY37 505 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 RAB3DO95716 219 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 TSPAN15O95858 294 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 HSD11B1P28845 292 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 ZNF616Q08AN1 781 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 ZNF792Q3KQV3 632 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 CTSL3PQ5NE16 218 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 CLVS2Q5SYC1 327 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 OR52E2Q8NGJ4 325 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 WDR20Q8TBZ3 569 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 GAL3ST4Q96RP7 486 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 RCE1Q9Y256 329 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 COCHO43405 550 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 MAS1P04201 325 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 ETV6P41212 452 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 FLI1Q01543 452 aaPredicted RBP14.95□□□□□ -0.02
SMC4-204ENST00000462787 KIAA1324Q6UXG2 1013 aaKnown RBP14.95□□□□□ -0.02
SMC4-204ENST00000462787 RAB11FIP2Q7L804 512 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 KCT2Q8NC54 265 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 PCNPQ8WW12 178 aaKnown RBP14.95□□□□□ -0.02
SMC4-204ENST00000462787 TMEM175Q9BSA9 504 aa14.95□□□□□ -0.02
SMC4-204ENST00000462787 MTHFD2LQ9H903 347 aaPredicted RBP14.95□□□□□ -0.02
SMC4-204ENST00000462787 CFAP20Q9Y6A4 193 aaKnown RBP14.95□□□□□ -0.02
SMC4-204ENST00000462787 CCL16O15467 120 aa14.94□□□□□ -0.02
SMC4-204ENST00000462787 SDC3O75056 442 aa14.94□□□□□ -0.02
SMC4-204ENST00000462787 RAB40ALP0C0E4 278 aa14.94□□□□□ -0.02
SMC4-204ENST00000462787 ILF3Q12906 894 aaKnown RBP eCLIP14.94□□□□□ -0.028e-14■■■■■ 40.3
SMC4-204ENST00000462787 ITPRIPL2Q3MIP1 535 aa14.94□□□□□ -0.02
SMC4-204ENST00000462787 ACBD4Q8NC06 268 aa14.94□□□□□ -0.02
SMC4-204ENST00000462787 RAB40AQ8WXH6 277 aa14.94□□□□□ -0.02
SMC4-204ENST00000462787 FAM46BQ96A09 425 aa14.94□□□□□ -0.02
SMC4-204ENST00000462787 GMLQ99445 158 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms