RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 CLDN2P57739 230 aa15.85■□□□□ 0.13
ACTB-207ENST00000462494 SNRPNP63162 240 aaKnown RBP15.85■□□□□ 0.13
ACTB-207ENST00000462494 FAM109BQ6ICB4 259 aaPredicted RBP15.85■□□□□ 0.13
ACTB-207ENST00000462494 ZNF425Q6IV72 752 aa15.85■□□□□ 0.13
ACTB-207ENST00000462494 NRMQ8IXM6 262 aa15.85■□□□□ 0.13
ACTB-207ENST00000462494 GJD3Q8N144 294 aa15.85■□□□□ 0.13
ACTB-207ENST00000462494 Q8N9G6 341 aaPredicted RBP15.85■□□□□ 0.13
ACTB-207ENST00000462494 SIMC1Q8NDZ2 872 aa15.85■□□□□ 0.13
ACTB-207ENST00000462494 OR7G2Q8NG99 324 aa15.85■□□□□ 0.13
ACTB-207ENST00000462494 OR4F15Q8NGB8 312 aa15.85■□□□□ 0.13
ACTB-207ENST00000462494 SETD6Q8TBK2 473 aa15.85■□□□□ 0.13
ACTB-207ENST00000462494 CDS1Q92903 461 aa15.85■□□□□ 0.13
ACTB-207ENST00000462494 OTULINQ96BN8 352 aa15.85■□□□□ 0.13
ACTB-207ENST00000462494 GIMAP5Q96F15 307 aa15.85■□□□□ 0.13
ACTB-207ENST00000462494 PRRG3Q9BZD7 231 aa15.85■□□□□ 0.13
ACTB-207ENST00000462494 MIXL1Q9H2W2 232 aa15.85■□□□□ 0.13
ACTB-207ENST00000462494 MRPS18AQ9NVS2 196 aaKnown RBP15.85■□□□□ 0.13
ACTB-207ENST00000462494 TBC1D29Q9UFV1 150 aa15.85■□□□□ 0.13
ACTB-207ENST00000462494 EXOSC1Q9Y3B2 195 aaKnown RBP15.85■□□□□ 0.13
ACTB-207ENST00000462494 PIP5K1CO60331 668 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 LIMS3P0CW19 117 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 LIMS4P0CW20 117 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 AK4P27144 223 aaPredicted RBP15.84■□□□□ 0.13
ACTB-207ENST00000462494 RFX2P48378 723 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 SLC9A3P48764 834 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 COPZ1P61923 177 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 TMEM53Q6P2H8 277 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 ZNF517Q6ZMY9 492 aaPredicted RBP15.84■□□□□ 0.13
ACTB-207ENST00000462494 CLDN22Q8N7P3 220 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 OR4Q3Q8NH05 313 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 ZCCHC10Q8TBK6 192 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 DOK4Q8TEW6 326 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 TMEM255BQ8WV15 326 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 CAPSLQ8WWF8 208 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 ARMC5Q96C12 935 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 TRIM45Q9H8W5 580 aaPredicted RBP15.84■□□□□ 0.13
ACTB-207ENST00000462494 LYARQ9NX58 379 aaKnown RBP15.84■□□□□ 0.13
ACTB-207ENST00000462494 CLCA2Q9UQC9 943 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 PCDHGB2Q9Y5G2 931 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 SLC35F4A4IF30 521 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 PRR19A6NJB7 356 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 KDM4EB2RXH2 506 aaPredicted RBP15.84■□□□□ 0.13
ACTB-207ENST00000462494 TFECO14948 347 aaPredicted RBP15.84■□□□□ 0.13
ACTB-207ENST00000462494 TMCC2O75069 709 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 KRT8P05787 483 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 TSFMP43897 325 aaKnown RBP15.84■□□□□ 0.13
ACTB-207ENST00000462494 FABP5Q01469 135 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 FAM214AQ32MH5 1076 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 PDZK1Q5T2W1 519 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 ZNF544Q6NX49 715 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 GDF7Q7Z4P5 450 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 VN1R4Q7Z5H5 301 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 MRGPREQ86SM8 312 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 NR4A3Q92570 626 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 OSTF1Q92882 214 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 SLC41A3Q96GZ6 507 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 KATNB1Q9BVA0 655 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 SARGQ9BW04 601 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 MARCH7Q9H992 704 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 GSTK1Q9Y2Q3 226 aa15.84■□□□□ 0.13
ACTB-207ENST00000462494 SF3B6Q9Y3B4 125 aaKnown RBP15.84■□□□□ 0.13
ACTB-207ENST00000462494 PRSS38A1L453 326 aa15.83■□□□□ 0.13
ACTB-207ENST00000462494 THY1P04216 161 aa15.83■□□□□ 0.13
ACTB-207ENST00000462494 CPN2P22792 545 aa15.83■□□□□ 0.13
ACTB-207ENST00000462494 PRKAR1BP31321 381 aa15.83■□□□□ 0.13
ACTB-207ENST00000462494 SSTR4P31391 388 aa15.83■□□□□ 0.13
ACTB-207ENST00000462494 ATP6V1E1P36543 226 aa15.83■□□□□ 0.13
ACTB-207ENST00000462494 ERVK-21P61565 698 aa15.83■□□□□ 0.13
ACTB-207ENST00000462494 SCN1BQ07699 218 aa15.83■□□□□ 0.13
ACTB-207ENST00000462494 RGS1Q08116 209 aa15.83■□□□□ 0.13
ACTB-207ENST00000462494 TPBGQ13641 420 aa15.83■□□□□ 0.13
ACTB-207ENST00000462494 CEBPEQ15744 281 aa15.83■□□□□ 0.13
ACTB-207ENST00000462494 DUSP6Q16828 381 aa15.83■□□□□ 0.13
ACTB-207ENST00000462494 DDI2Q5TDH0 399 aa15.83■□□□□ 0.13
ACTB-207ENST00000462494 QSOX2Q6ZRP7 698 aa15.83■□□□□ 0.13
ACTB-207ENST00000462494 UBQLNLQ8IYU4 475 aa15.83■□□□□ 0.13
ACTB-207ENST00000462494 LRRC25Q8N386 305 aaPredicted RBP15.83■□□□□ 0.13
ACTB-207ENST00000462494 BBS1Q8NFJ9 593 aa15.83■□□□□ 0.13
ACTB-207ENST00000462494 ACOT11Q8WXI4 607 aaPredicted RBP15.83■□□□□ 0.13
ACTB-207ENST00000462494 TMED9Q9BVK6 235 aa15.83■□□□□ 0.13
ACTB-207ENST00000462494 C1QTNF7Q9BXJ2 289 aa15.83■□□□□ 0.13
ACTB-207ENST00000462494 TEX12Q9BXU0 123 aa15.83■□□□□ 0.13
ACTB-207ENST00000462494 KIR3DX1Q9H7L2 352 aa15.83■□□□□ 0.13
ACTB-207ENST00000462494 TBC1D17Q9HA65 648 aa15.83■□□□□ 0.13
ACTB-207ENST00000462494 CACYBPQ9HB71 228 aaKnown RBP15.83■□□□□ 0.13
ACTB-207ENST00000462494 NEK6Q9HC98 313 aa15.83■□□□□ 0.13
ACTB-207ENST00000462494 ZNF443Q9Y2A4 671 aaPredicted RBP15.83■□□□□ 0.13
ACTB-207ENST00000462494 HEBP2Q9Y5Z4 205 aa15.83■□□□□ 0.13
ACTB-207ENST00000462494 CSNK1G3Q9Y6M4 447 aa15.83■□□□□ 0.13
ACTB-207ENST00000462494 SURF4O15260 269 aa15.83■□□□□ 0.12
ACTB-207ENST00000462494 PLRG1O43660 514 aaKnown RBP15.83■□□□□ 0.12
ACTB-207ENST00000462494 KCNJ13O60928 360 aa15.83■□□□□ 0.12
ACTB-207ENST00000462494 SLC2A10O95528 541 aa15.83■□□□□ 0.12
ACTB-207ENST00000462494 GABRA5P31644 462 aa15.83■□□□□ 0.12
ACTB-207ENST00000462494 RCVRNP35243 200 aa15.83■□□□□ 0.12
ACTB-207ENST00000462494 SLC1A3P43003 542 aa15.83■□□□□ 0.12
ACTB-207ENST00000462494 HTR3AP46098 478 aa15.83■□□□□ 0.12
ACTB-207ENST00000462494 RNF144AP50876 292 aaPredicted RBP15.83■□□□□ 0.12
ACTB-207ENST00000462494 ARFIP1P53367 373 aa15.83■□□□□ 0.12
ACTB-207ENST00000462494 SIM1P81133 766 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms