RNA–Protein interactions for RNA: ENST00000460050.1

THBS3-204, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-204ENST00000460050 COQ8BQ96D53 544 aa13.01□□□□□ -0.33
THBS3-204ENST00000460050 FAM120BQ96EK7 910 aaKnown RBP13.01□□□□□ -0.33
THBS3-204ENST00000460050 GIMAP5Q96F15 307 aa13.01□□□□□ -0.33
THBS3-204ENST00000460050 PRPF18Q99633 342 aaKnown RBP13.01□□□□□ -0.33
THBS3-204ENST00000460050 MEAF6Q9HAF1 191 aa13.01□□□□□ -0.33
THBS3-204ENST00000460050 THAP1Q9NVV9 213 aa13.01□□□□□ -0.33
THBS3-204ENST00000460050 KLF2Q9Y5W3 355 aaPredicted RBP13.01□□□□□ -0.33
THBS3-204ENST00000460050 SCO2O43819 266 aa13□□□□□ -0.33
THBS3-204ENST00000460050 WDR1O75083 606 aa13□□□□□ -0.33
THBS3-204ENST00000460050 NKX2-2O95096 273 aa13□□□□□ -0.33
THBS3-204ENST00000460050 IL33O95760 270 aa13□□□□□ -0.33
THBS3-204ENST00000460050 C6orf47O95873 294 aa13□□□□□ -0.33
THBS3-204ENST00000460050 ACP2P11117 423 aa13□□□□□ -0.33
THBS3-204ENST00000460050 LBPP18428 481 aa13□□□□□ -0.33
THBS3-204ENST00000460050 EVI2BP34910 448 aa13□□□□□ -0.33
THBS3-204ENST00000460050 DCTP40126 519 aa13□□□□□ -0.33
THBS3-204ENST00000460050 MAP3K8P41279 467 aa13□□□□□ -0.33
THBS3-204ENST00000460050 PSMD4P55036 377 aaKnown RBP13□□□□□ -0.33
THBS3-204ENST00000460050 PRR5P85299 388 aa13□□□□□ -0.33
THBS3-204ENST00000460050 CDSNQ15517 529 aa13□□□□□ -0.33
THBS3-204ENST00000460050 PGS1Q32NB8 556 aa13□□□□□ -0.33
THBS3-204ENST00000460050 VPS26BQ4G0F5 336 aa13□□□□□ -0.33
THBS3-204ENST00000460050 EIPR1Q53HC9 387 aa13□□□□□ -0.33
THBS3-204ENST00000460050 WIPI1Q5MNZ9 446 aaPredicted RBP13□□□□□ -0.33
THBS3-204ENST00000460050 MFSD12Q6NUT3 480 aa13□□□□□ -0.33
THBS3-204ENST00000460050 YRDCQ86U90 279 aaKnown RBP13□□□□□ -0.33
THBS3-204ENST00000460050 PLCZ1Q86YW0 608 aa13□□□□□ -0.33
THBS3-204ENST00000460050 TRIM42Q8IWZ5 723 aa13□□□□□ -0.33
THBS3-204ENST00000460050 NATD1Q8N6N6 113 aa13□□□□□ -0.33
THBS3-204ENST00000460050 FAM83FQ8NEG4 500 aaPredicted RBP13□□□□□ -0.33
THBS3-204ENST00000460050 RAB3IL1Q8TBN0 382 aa13□□□□□ -0.33
THBS3-204ENST00000460050 GPR151Q8TDV0 419 aa13□□□□□ -0.33
THBS3-204ENST00000460050 PIK3R3Q92569 461 aa13□□□□□ -0.33
THBS3-204ENST00000460050 SLC9A6Q92581 669 aa13□□□□□ -0.33
THBS3-204ENST00000460050 SDCCAG3Q96C92 435 aa13□□□□□ -0.33
THBS3-204ENST00000460050 RMND5BQ96G75 393 aaPredicted RBP13□□□□□ -0.33
THBS3-204ENST00000460050 DUSP26Q9BV47 211 aa13□□□□□ -0.33
THBS3-204ENST00000460050 BHLHE41Q9C0J9 482 aaPredicted RBP13□□□□□ -0.33
THBS3-204ENST00000460050 MANSC1Q9H8J5 431 aa13□□□□□ -0.33
THBS3-204ENST00000460050 ZCCHC3Q9NUD5 404 aaKnown RBP13□□□□□ -0.33
THBS3-204ENST00000460050 ALKBH4Q9NXW9 302 aa13□□□□□ -0.33
THBS3-204ENST00000460050 FLRT3Q9NZU0 649 aa13□□□□□ -0.33
THBS3-204ENST00000460050 MARCOQ9UEW3 520 aaPredicted RBP13□□□□□ -0.33
THBS3-204ENST00000460050 MRTO4Q9UKD2 239 aaKnown RBP13□□□□□ -0.33
THBS3-204ENST00000460050 SLC6A5Q9Y345 797 aa13□□□□□ -0.33
THBS3-204ENST00000460050 SNX8Q9Y5X2 465 aa13□□□□□ -0.33
THBS3-204ENST00000460050 PKDREJQ9NTG1 2253 aa13□□□□□ -0.33
THBS3-204ENST00000460050 CACNA1DQ01668 2161 aa13□□□□□ -0.33
THBS3-204ENST00000460050 SDHDO14521 159 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 HDAC3O15379 428 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 FADS1O60427 444 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 CBR3O75828 277 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 KCNH1O95259 989 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 CLDN14O95500 239 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 IGKV1D-16P01601 117 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 HTR1EP28566 365 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 GRNP28799 593 aaKnown RBP12.99□□□□□ -0.33
THBS3-204ENST00000460050 GAS1P54826 345 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 NUP107P57740 925 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 OCRLQ01968 901 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 CRYZQ08257 329 aaKnown RBP12.99□□□□□ -0.33
THBS3-204ENST00000460050 PMPCAQ10713 525 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 DUSP5Q16690 384 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 LSM12Q3MHD2 195 aaKnown RBP12.99□□□□□ -0.33
THBS3-204ENST00000460050 C1orf185Q5T7R7 199 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 RTL6Q6ICC9 239 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 OR5M10Q6IEU7 315 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 B3GNT6Q6ZMB0 384 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 CAMKMTQ7Z624 323 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 ULK2Q8IYT8 1036 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 LRRC34Q8IZ02 419 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 SLC16A11Q8NCK7 471 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 PSMA8Q8TAA3 256 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 OTUB1Q96FW1 271 aaPredicted RBP12.99□□□□□ -0.33
THBS3-204ENST00000460050 C16orf58Q96GQ5 468 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 ATP6V1G3Q96LB4 118 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 YIPF4Q9BSR8 244 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 DPY30Q9C005 99 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 CXorf36Q9H7Y0 433 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 ARGLU1Q9NWB6 273 aaPredicted RBP12.99□□□□□ -0.33
THBS3-204ENST00000460050 FAM120CQ9NX05 1096 aaKnown RBP12.99□□□□□ -0.33
THBS3-204ENST00000460050 COQ3Q9NZJ6 369 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 FBXL2Q9UKC9 423 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 ABCG2Q9UNQ0 655 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 FAM215AQ9Y5M1 114 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 TEX15Q9BXT5 2789 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 ARHGAP21Q5T5U3 1957 aa12.99□□□□□ -0.33
THBS3-204ENST00000460050 DCHS2Q6V1P9 2916 aa12.98□□□□□ -0.33
THBS3-204ENST00000460050 C17orf51A8MQB3 221 aa12.98□□□□□ -0.33
THBS3-204ENST00000460050 CFLARO15519 480 aa12.98□□□□□ -0.33
THBS3-204ENST00000460050 UTS2O95399 124 aa12.98□□□□□ -0.33
THBS3-204ENST00000460050 HMGN2P05204 90 aaKnown RBP12.98□□□□□ -0.33
THBS3-204ENST00000460050 ALOX5P09917 674 aa12.98□□□□□ -0.33
THBS3-204ENST00000460050 KITP10721 976 aa12.98□□□□□ -0.33
THBS3-204ENST00000460050 GABRA1P14867 456 aa12.98□□□□□ -0.33
THBS3-204ENST00000460050 H2AFXP16104 143 aaPredicted RBP12.98□□□□□ -0.33
THBS3-204ENST00000460050 CCT3P49368 545 aaKnown RBP12.98□□□□□ -0.33
THBS3-204ENST00000460050 PRIM2P49643 509 aa12.98□□□□□ -0.33
THBS3-204ENST00000460050 TP53BP2Q13625 1128 aa12.98□□□□□ -0.33
THBS3-204ENST00000460050 LASP1Q14847 261 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms