RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 FAF1Q9UNN5 650 aaPredicted RBP16.51■□□□□ 0.23
PDLIM2-215ENST00000456545 WIF1Q9Y5W5 379 aa16.51■□□□□ 0.23
PDLIM2-215ENST00000456545 ZNF407Q9C0G0 2248 aa16.51■□□□□ 0.23
PDLIM2-215ENST00000456545 GOLGA8QA0A0J9YX86 632 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 GXYLT2A0PJZ3 443 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 GOLGA8OA6NCC3 632 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 GOLGA8NF8WBI6 632 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 WDR1O75083 606 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 GABRA1P14867 456 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 ACVR2AP27037 513 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 COL8A1P27658 744 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 PTPN6P29350 595 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 SOAT1P35610 550 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 PTGDSP41222 190 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 PMPCAQ10713 525 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 ART3Q13508 389 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 TP53BP2Q13625 1128 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 WIPI1Q5MNZ9 446 aaPredicted RBP16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 OR5M10Q6IEU7 315 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 BHLHB9Q6PI77 547 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 NCCRP1Q6ZVX7 275 aaPredicted RBP16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 ACAD11Q709F0 780 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 SPATA19Q7Z5L4 167 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 YRDCQ86U90 279 aaKnown RBP16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 WDR75Q8IWA0 830 aaKnown RBP16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 COX18Q8N8Q8 333 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 OR4K17Q8NGC6 315 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 OR56A1Q8NGH5 318 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 OR14L1PQ8NHC6 308 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 LRRC8CQ8TDW0 803 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 CA5BP1Q8WTZ4 195 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 RND1Q92730 232 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 SDCCAG3Q96C92 435 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 FAM120BQ96EK7 910 aaKnown RBP16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 C16orf58Q96GQ5 468 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 DMRTA2Q96SC8 542 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 TBL1XR1Q9BZK7 514 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 VIPAS39Q9H9C1 493 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 NTMQ9P121 344 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 SPRR3Q9UBC9 169 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 SLC6A5Q9Y345 797 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 HRH3Q9Y5N1 445 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 COL12A1Q99715 3063 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 DNAJC13O75165 2243 aa16.5■□□□□ 0.23
PDLIM2-215ENST00000456545 ICE1Q9Y2F5 2266 aa16.49■□□□□ 0.23
PDLIM2-215ENST00000456545 NCKAP5O14513 1909 aa16.49■□□□□ 0.23
PDLIM2-215ENST00000456545 HMGB1P1B2RPK0 211 aaPredicted RBP16.49■□□□□ 0.23
PDLIM2-215ENST00000456545 ADAM10O14672 748 aa16.49■□□□□ 0.23
PDLIM2-215ENST00000456545 NKX2-2O95096 273 aa16.49■□□□□ 0.23
PDLIM2-215ENST00000456545 KRT16P08779 473 aa16.49■□□□□ 0.23
PDLIM2-215ENST00000456545 HOXD4P09016 255 aaPredicted RBP16.49■□□□□ 0.23
PDLIM2-215ENST00000456545 AGAP20933 346 aa16.49■□□□□ 0.23
PDLIM2-215ENST00000456545 EVI2BP34910 448 aa16.49■□□□□ 0.23
PDLIM2-215ENST00000456545 CLNS1AP54105 237 aaKnown RBP16.49■□□□□ 0.23
PDLIM2-215ENST00000456545 C21orf58P58505 322 aa16.49■□□□□ 0.23
PDLIM2-215ENST00000456545 LASP1Q14847 261 aaKnown RBP16.49■□□□□ 0.23
PDLIM2-215ENST00000456545 EIPR1Q53HC9 387 aa16.49■□□□□ 0.23
PDLIM2-215ENST00000456545 EMC4Q5J8M3 183 aa16.49■□□□□ 0.23
PDLIM2-215ENST00000456545 OR4F3Q6IEY1 312 aa16.49■□□□□ 0.23
PDLIM2-215ENST00000456545 MFSD12Q6NUT3 480 aa16.49■□□□□ 0.23
PDLIM2-215ENST00000456545 WDSUB1Q8N9V3 476 aa16.49■□□□□ 0.23
PDLIM2-215ENST00000456545 SLC16A11Q8NCK7 471 aa16.49■□□□□ 0.23
PDLIM2-215ENST00000456545 FAM83FQ8NEG4 500 aaPredicted RBP16.49■□□□□ 0.23
PDLIM2-215ENST00000456545 ADAMTS15Q8TE58 950 aa16.49■□□□□ 0.23
PDLIM2-215ENST00000456545 MOAP1Q96BY2 351 aa16.49■□□□□ 0.23
PDLIM2-215ENST00000456545 UBQLN3Q9H347 655 aa16.49■□□□□ 0.23
PDLIM2-215ENST00000456545 WDR55Q9H6Y2 383 aaPredicted RBP16.49■□□□□ 0.23
PDLIM2-215ENST00000456545 NEUROD4Q9HD90 331 aa16.49■□□□□ 0.23
PDLIM2-215ENST00000456545 SIRT3Q9NTG7 399 aaPredicted RBP16.49■□□□□ 0.23
PDLIM2-215ENST00000456545 DKKL1Q9UK85 242 aa16.49■□□□□ 0.23
PDLIM2-215ENST00000456545 FREM3P0C091 2139 aa16.49■□□□□ 0.23
PDLIM2-215ENST00000456545 USP9XQ93008 2570 aaPredicted RBP16.48■□□□□ 0.23
PDLIM2-215ENST00000456545 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.48■□□□□ 0.23
PDLIM2-215ENST00000456545 SDHDO14521 159 aa16.48■□□□□ 0.23
PDLIM2-215ENST00000456545 KLF11O14901 512 aa16.48■□□□□ 0.23
PDLIM2-215ENST00000456545 UTS2O95399 124 aa16.48■□□□□ 0.23
PDLIM2-215ENST00000456545 CLDN14O95500 239 aa16.48■□□□□ 0.23
PDLIM2-215ENST00000456545 CPSF4O95639 269 aaKnown RBP16.48■□□□□ 0.23
PDLIM2-215ENST00000456545 HMGN2P05204 90 aaKnown RBP16.48■□□□□ 0.23
PDLIM2-215ENST00000456545 ACP2P11117 423 aa16.48■□□□□ 0.23
PDLIM2-215ENST00000456545 HPGDP15428 266 aa16.48■□□□□ 0.23
PDLIM2-215ENST00000456545 H2AFXP16104 143 aaPredicted RBP16.48■□□□□ 0.23
PDLIM2-215ENST00000456545 EPHA3P29320 983 aa16.48■□□□□ 0.23
PDLIM2-215ENST00000456545 S100A3P33764 101 aa16.48■□□□□ 0.23
PDLIM2-215ENST00000456545 KIR3DL1P43629 444 aa16.48■□□□□ 0.23
PDLIM2-215ENST00000456545 NME5P56597 212 aa16.48■□□□□ 0.23
PDLIM2-215ENST00000456545 POU6F2P78424 691 aaPredicted RBP16.48■□□□□ 0.23
PDLIM2-215ENST00000456545 OCRLQ01968 901 aa16.48■□□□□ 0.23
PDLIM2-215ENST00000456545 STX5Q13190 355 aa16.48■□□□□ 0.23
PDLIM2-215ENST00000456545 SF3B4Q15427 424 aaKnown RBP eCLIP16.48■□□□□ 0.23
PDLIM2-215ENST00000456545 ANXA8L1Q5VT79 327 aa16.48■□□□□ 0.23
PDLIM2-215ENST00000456545 SP5Q6BEB4 398 aaPredicted RBP16.48■□□□□ 0.23
PDLIM2-215ENST00000456545 FIGNL1Q6PIW4 674 aa16.48■□□□□ 0.23
PDLIM2-215ENST00000456545 B3GNT6Q6ZMB0 384 aa16.48■□□□□ 0.23
PDLIM2-215ENST00000456545 PM20D2Q8IYS1 436 aa16.48■□□□□ 0.23
PDLIM2-215ENST00000456545 OR4A15Q8NGL6 344 aa16.48■□□□□ 0.23
PDLIM2-215ENST00000456545 PIWIL2Q8TC59 973 aaKnown RBP16.48■□□□□ 0.23
PDLIM2-215ENST00000456545 ASB5Q8WWX0 329 aa16.48■□□□□ 0.23
PDLIM2-215ENST00000456545 ABTB1Q969K4 478 aaPredicted RBP16.48■□□□□ 0.23
PDLIM2-215ENST00000456545 GIMAP5Q96F15 307 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms