RNA–Protein interactions for RNA: ENST00000454994.3

AL139260.3-202, humanhuman

TSL 2

Gene AL139260.3, Length 2,381 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL139260.3-202ENST00000454994 SOCS6O14544 535 aa12.68□□□□□ -0.38
AL139260.3-202ENST00000454994 LINC01565O15544 149 aa12.68□□□□□ -0.38
AL139260.3-202ENST00000454994 HRO43593 1189 aa12.68□□□□□ -0.38
AL139260.3-202ENST00000454994 DYRK3O43781 588 aa12.68□□□□□ -0.38
AL139260.3-202ENST00000454994 PRG2P13727 222 aa12.68□□□□□ -0.38
AL139260.3-202ENST00000454994 CPEP16870 476 aa12.68□□□□□ -0.38
AL139260.3-202ENST00000454994 CSNK2A2P19784 350 aaPredicted RBP12.68□□□□□ -0.38
AL139260.3-202ENST00000454994 TCEA1P23193 301 aaKnown RBP12.68□□□□□ -0.38
AL139260.3-202ENST00000454994 GDI1P31150 447 aa12.68□□□□□ -0.38
AL139260.3-202ENST00000454994 OMPP47874 163 aa12.68□□□□□ -0.38
AL139260.3-202ENST00000454994 MTNR1AP48039 350 aa12.68□□□□□ -0.38
AL139260.3-202ENST00000454994 WNT4P56705 351 aa12.68□□□□□ -0.38
AL139260.3-202ENST00000454994 STXBP1P61764 594 aaKnown RBP12.68□□□□□ -0.38
AL139260.3-202ENST00000454994 IFITM2Q01629 132 aa12.68□□□□□ -0.38
AL139260.3-202ENST00000454994 DEFB134Q4QY38 66 aa12.68□□□□□ -0.38
AL139260.3-202ENST00000454994 ARMC4Q5T2S8 1044 aa12.68□□□□□ -0.38
AL139260.3-202ENST00000454994 HSDL2Q6YN16 418 aa12.68□□□□□ -0.38
AL139260.3-202ENST00000454994 FAM92BQ6ZTR7 304 aa12.68□□□□□ -0.38
AL139260.3-202ENST00000454994 PRSS41Q7RTY9 318 aa12.68□□□□□ -0.38
AL139260.3-202ENST00000454994 DTX3Q8N9I9 347 aa12.68□□□□□ -0.38
AL139260.3-202ENST00000454994 SMAP2Q8WU79 429 aaPredicted RBP12.68□□□□□ -0.38
AL139260.3-202ENST00000454994 ELSPBP1Q96BH3 223 aa12.68□□□□□ -0.38
AL139260.3-202ENST00000454994 ZNF681Q96N22 645 aa12.68□□□□□ -0.38
AL139260.3-202ENST00000454994 MYADMQ96S97 322 aa12.68□□□□□ -0.38
AL139260.3-202ENST00000454994 TBX5Q99593 518 aa12.68□□□□□ -0.38
AL139260.3-202ENST00000454994 PINK1Q9BXM7 581 aa12.68□□□□□ -0.38
AL139260.3-202ENST00000454994 HDHD5Q9BXW7 423 aa12.68□□□□□ -0.38
AL139260.3-202ENST00000454994 FBXO34Q9NWN3 711 aa12.68□□□□□ -0.38
AL139260.3-202ENST00000454994 COMMD3Q9UBI1 195 aa12.68□□□□□ -0.38
AL139260.3-202ENST00000454994 TBC1D3DA0A087WVF3 549 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 TBC1D3IA0A087WXS9 549 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 TBC1D3EA0A087X179 549 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 TBC1D3KA0A087X1G2 549 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 TBC1D3FA6NER0 549 aaPredicted RBP12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 TBC1D3LB9A6J9 549 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 RNGTTO60942 597 aaKnown RBP12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 APOA1P02647 267 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 TBC1D3HP0C7X1 549 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 CCNYL3P0C7X3 344 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 GKN3PP0CG01 181 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 ATXN8OSP0DMR3 200 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 ACP2P11117 423 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 RGS8P57771 180 aaPredicted RBP12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 RUNX1T1Q06455 604 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 TGM3Q08188 693 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 SRSF5Q13243 272 aaKnown RBP12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 ITPRIPL2Q3MIP1 535 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 TMEM35AQ53FP2 167 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 FCRLBQ6BAA4 426 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 TBC1D3GQ6DHY5 549 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 TBC1D3CQ6IPX1 549 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 PARM1Q6UWI2 310 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 SLC36A4Q6YBV0 504 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 PLEKHM3Q6ZWE6 761 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 TBC1D3Q8IZP1 549 aaPredicted RBP12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 NATD1Q8N6N6 113 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 FRMD1Q8N878 549 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 TSACCQ96A04 125 aaPredicted RBP12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 NACC2Q96BF6 587 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 SMAD5Q99717 465 aaKnown RBP12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 KATNB1Q9BVA0 655 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 SLC17A9Q9BYT1 436 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 PBX4Q9BYU1 374 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 ENKD1Q9H0I2 346 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 C3orf14Q9HBI5 128 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 CAPN10Q9HC96 672 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 SLC13A4Q9UKG4 626 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 MRPS2Q9Y399 296 aaKnown RBP12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 ARHGEF17Q96PE2 2063 aaPredicted RBP12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 A0A0G2JPF8 293 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 C2orf92A0A1B0GVN3 265 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 CD8B2A6NJW9 211 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 HNRNPCL2B2RXH8 293 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 HNRNPCL3B7ZW38 293 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 PRODHO43272 600 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 EMC8O43402 210 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 HNRNPCL4P0DMR1 293 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 CD8BP10966 210 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 CDH11P55287 796 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 TRA2BP62995 288 aaKnown RBP12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 DMPKQ09013 629 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 ATAD3CQ5T2N8 411 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 AGAP6Q5VW22 663 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 ANKRD54Q6NXT1 300 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 SMARCD3Q6STE5 483 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 LAPTM4BQ86VI4 370 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 OR56A1Q8NGH5 318 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 DIRAS2Q96HU8 199 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 AGAP4Q96P64 663 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 ARHGDIGQ99819 225 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 TP63Q9H3D4 680 aaPredicted RBP12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 SLC7A7Q9UM01 511 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 SLC17A4Q9Y2C5 497 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 SF3B6Q9Y3B4 125 aaKnown RBP12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 BOLA1Q9Y3E2 137 aa12.67□□□□□ -0.38
AL139260.3-202ENST00000454994 EPOPA6NHQ4 379 aa12.66□□□□□ -0.38
AL139260.3-202ENST00000454994 COL9A1P20849 921 aa12.66□□□□□ -0.38
AL139260.3-202ENST00000454994 PRR5P85299 388 aa12.66□□□□□ -0.38
AL139260.3-202ENST00000454994 CSTF1Q05048 431 aaKnown RBP12.66□□□□□ -0.38
AL139260.3-202ENST00000454994 COX10Q12887 443 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms