RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 PRM3Q9NNZ6 103 aa11.19□□□□□ -0.62
AC004540.1-204ENST00000449537 FBXO34Q9NWN3 711 aa11.19□□□□□ -0.62
AC004540.1-204ENST00000449537 ZNF337Q9Y3M9 751 aa11.19□□□□□ -0.62
AC004540.1-204ENST00000449537 WNK1Q9H4A3 2382 aa11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 A0A087WUV0 522 aaPredicted RBP11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 TCRBV9S1A1TA0A576 114 aa11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 WASHC1A8K0Z3 465 aa11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 LINC01387J3KSC0 135 aa11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 SS18L1O75177 396 aaPredicted RBP11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 UGT2B11O75310 529 aa11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 LY6HO94772 140 aa11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 WDR47O94967 919 aa11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 SCELO95171 688 aa11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 BMP4P12644 408 aa11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 DSCR4P56555 118 aaPredicted RBP11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 CLDN20P56880 219 aa11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 MGAT5Q09328 741 aa11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 FASTKD3Q14CZ7 662 aaKnown RBP11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 SFRP5Q5T4F7 317 aa11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 CROCCP2Q86T23 111 aa11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 AGGF1Q8N302 714 aaeCLIP11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 KCTD4Q8WVF5 259 aa11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 TMCO6Q96DC7 493 aa11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 CFAP36Q96G28 342 aa11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 RADILQ96JH8 1075 aa11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 FOXN4Q96NZ1 517 aa11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 BTBD9Q96Q07 612 aa11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 DHRS9Q9BPW9 319 aa11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 CAPS2Q9BXY5 557 aa11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 VIPAS39Q9H9C1 493 aa11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 NINJ2Q9NZG7 142 aa11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 XPR1Q9UBH6 696 aa11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 VWFP04275 2813 aa11.18□□□□□ -0.62
AC004540.1-204ENST00000449537 PLCE1Q9P212 2302 aa11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 E7EQL1 145 aa11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 RIPK2O43353 540 aa11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 PRKRAO75569 313 aaKnown RBP11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 ZNF23P17027 643 aa11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 GDF5P43026 501 aa11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 SSR2P43308 183 aa11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 SLC6A8P48029 635 aa11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 FABP6P51161 128 aa11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 CDKN2DP55273 166 aa11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 TNFRSF17Q02223 184 aa11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 SCGB2A2Q13296 93 aa11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 NNATQ16517 81 aa11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 TMEM35AQ53FP2 167 aa11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 HSP90B2PQ58FF3 399 aa11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 BEND6Q5SZJ8 279 aaPredicted RBP11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 RAET1LQ5VY80 246 aa11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 DEF8Q6ZN54 512 aa11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 C3orf62Q6ZUJ4 267 aa11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 ANKMY2Q8IV38 441 aa11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 METTL25Q8N6Q8 603 aa11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 GBP7Q8N8V2 638 aaPredicted RBP11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 OR7G1Q8NGA0 311 aa11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 OR4K17Q8NGC6 315 aa11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 SOX7Q9BT81 388 aa11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 ACSS3Q9H6R3 686 aa11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 C12orf49Q9H741 205 aa11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 GLRX2Q9NS18 164 aa11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 C20orf96Q9NUD7 363 aaPredicted RBP11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 TXNDC16Q9P2K2 825 aa11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 PHF11Q9UIL8 331 aa11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 PCDHB10Q9UN67 800 aa11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 PMF1-BGLAPU3KQ54 211 aa11.17□□□□□ -0.62
AC004540.1-204ENST00000449537 FAM159BA6NKW6 160 aa11.16□□□□□ -0.62
AC004540.1-204ENST00000449537 H3BML4 177 aa11.16□□□□□ -0.62
AC004540.1-204ENST00000449537 ABCD4O14678 606 aa11.16□□□□□ -0.62
AC004540.1-204ENST00000449537 SMAD9O15198 467 aaKnown RBP11.16□□□□□ -0.62
AC004540.1-204ENST00000449537 SH3BGRLO75368 114 aa11.16□□□□□ -0.62
AC004540.1-204ENST00000449537 BANF1O75531 89 aa11.16□□□□□ -0.62
AC004540.1-204ENST00000449537 GCM2O75603 506 aaPredicted RBP11.16□□□□□ -0.62
AC004540.1-204ENST00000449537 RGS9O75916 674 aaPredicted RBP11.16□□□□□ -0.62
AC004540.1-204ENST00000449537 NUDT17P0C025 328 aa11.16□□□□□ -0.62
AC004540.1-204ENST00000449537 HK1P19367 917 aa11.16□□□□□ -0.62
AC004540.1-204ENST00000449537 GPX3P22352 226 aa11.16□□□□□ -0.62
AC004540.1-204ENST00000449537 GRK2P25098 689 aa11.16□□□□□ -0.62
AC004540.1-204ENST00000449537 BUD31P41223 144 aaPredicted RBP11.16□□□□□ -0.62
AC004540.1-204ENST00000449537 LIMS1P48059 325 aa11.16□□□□□ -0.62
AC004540.1-204ENST00000449537 PLCXD2Q0VAA5 305 aa11.16□□□□□ -0.62
AC004540.1-204ENST00000449537 RASA2Q15283 850 aa11.16□□□□□ -0.62
AC004540.1-204ENST00000449537 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.16□□□□□ -0.62
AC004540.1-204ENST00000449537 OR4C11Q6IEV9 310 aa11.16□□□□□ -0.62
AC004540.1-204ENST00000449537 GALNT12Q8IXK2 581 aa11.16□□□□□ -0.62
AC004540.1-204ENST00000449537 GSPT2Q8IYD1 628 aaKnown RBP11.16□□□□□ -0.62
AC004540.1-204ENST00000449537 KISS1RQ969F8 398 aaPredicted RBP11.16□□□□□ -0.62
AC004540.1-204ENST00000449537 HBEGFQ99075 208 aa11.16□□□□□ -0.62
AC004540.1-204ENST00000449537 CPNE1Q99829 537 aa11.16□□□□□ -0.62
AC004540.1-204ENST00000449537 EGFL8Q99944 293 aa11.16□□□□□ -0.62
AC004540.1-204ENST00000449537 MS4A8Q9BY19 250 aa11.16□□□□□ -0.62
AC004540.1-204ENST00000449537 EHD1Q9H4M9 534 aa11.16□□□□□ -0.62
AC004540.1-204ENST00000449537 EHD3Q9NZN3 535 aa11.16□□□□□ -0.62
AC004540.1-204ENST00000449537 POU2F3Q9UKI9 436 aa11.16□□□□□ -0.62
AC004540.1-204ENST00000449537 LOC390937A0A1W2PQ73 354 aa11.15□□□□□ -0.62
AC004540.1-204ENST00000449537 GLOD5A6NK44 160 aa11.15□□□□□ -0.62
AC004540.1-204ENST00000449537 SAP18O00422 153 aaKnown RBP11.15□□□□□ -0.62
AC004540.1-204ENST00000449537 CLGNO14967 610 aa11.15□□□□□ -0.62
AC004540.1-204ENST00000449537 ACOX3O15254 700 aa11.15□□□□□ -0.62
AC004540.1-204ENST00000449537 TGFB1P01137 390 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms