RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 GCM2O75603 506 aaPredicted RBP13.51□□□□□ -0.25
TNF-208ENST00000449264 SOX30O94993 753 aa13.51□□□□□ -0.25
TNF-208ENST00000449264 ZNF682O95780 498 aa13.51□□□□□ -0.25
TNF-208ENST00000449264 IGKV1D-16P01601 117 aa13.51□□□□□ -0.25
TNF-208ENST00000449264 KDELR2P33947 212 aa13.51□□□□□ -0.25
TNF-208ENST00000449264 NRG3P56975 720 aa13.51□□□□□ -0.25
TNF-208ENST00000449264 PCBP3P57721 371 aaKnown RBP13.51□□□□□ -0.25
TNF-208ENST00000449264 ACTR3P61158 418 aa13.51□□□□□ -0.25
TNF-208ENST00000449264 DMTNQ08495 405 aa13.51□□□□□ -0.25
TNF-208ENST00000449264 CCNIQ14094 377 aa13.51□□□□□ -0.25
TNF-208ENST00000449264 CYP27C1Q4G0S4 372 aa13.51□□□□□ -0.25
TNF-208ENST00000449264 TYW3Q6IPR3 259 aaKnown RBP13.51□□□□□ -0.25
TNF-208ENST00000449264 ZAR1Q86SH2 424 aa13.51□□□□□ -0.25
TNF-208ENST00000449264 KBTBD2Q8IY47 623 aa13.51□□□□□ -0.25
TNF-208ENST00000449264 METTL25Q8N6Q8 603 aa13.51□□□□□ -0.25
TNF-208ENST00000449264 SIRT6Q8N6T7 355 aa13.51□□□□□ -0.25
TNF-208ENST00000449264 C17orf47Q8NEP4 570 aa13.51□□□□□ -0.25
TNF-208ENST00000449264 OR10Q1Q8NGQ4 319 aa13.51□□□□□ -0.25
TNF-208ENST00000449264 SLC26A7Q8TE54 656 aa13.51□□□□□ -0.25
TNF-208ENST00000449264 RSRC1Q96IZ7 334 aaKnown RBP13.51□□□□□ -0.25
TNF-208ENST00000449264 GORASP2Q9H8Y8 452 aa13.51□□□□□ -0.25
TNF-208ENST00000449264 MYOTQ9UBF9 498 aa13.51□□□□□ -0.25
TNF-208ENST00000449264 ANGPTL2Q9UKU9 493 aa13.51□□□□□ -0.25
TNF-208ENST00000449264 A0A0G2JPF8 293 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 ARGFXA6NJG6 315 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 TMEM200CA6NKL6 621 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 ZNF891A8MT65 544 aaPredicted RBP13.5□□□□□ -0.25
TNF-208ENST00000449264 HNRNPCL2B2RXH8 293 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 HNRNPCL3B7ZW38 293 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 M0QX08 132 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 ENTPD5O75356 428 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 OR2J2O76002 312 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 PDE9AO76083 593 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 SERPINA7P05543 415 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 HNRNPCL4P0DMR1 293 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 ITGA3P26006 1051 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 ABCD3P28288 659 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 IL12BP29460 328 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 KRT20P35900 424 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 CRYBA2P53672 197 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 CHAF1BQ13112 559 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 FLYWCH1Q4VC44 716 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 PATL1Q86TB9 770 aaKnown RBP13.5□□□□□ -0.25
TNF-208ENST00000449264 KRT73Q86Y46 540 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 TAGAPQ8N103 731 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 SLC34A3Q8N130 599 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 ZNF619Q8N2I2 560 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 SMYD1Q8NB12 490 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 CLEC1AQ8NC01 280 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 BRIX1Q8TDN6 353 aaKnown RBP13.5□□□□□ -0.25
TNF-208ENST00000449264 TP53INP1Q96A56 240 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 TAMM41Q96BW9 452 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 OMA1Q96E52 524 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 HSPBAP1Q96EW2 488 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 THOC3Q96J01 351 aaKnown RBP13.5□□□□□ -0.25
TNF-208ENST00000449264 FER1L6-AS2Q96M78 137 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 CCNL2Q96S94 520 aaPredicted RBP13.5□□□□□ -0.25
TNF-208ENST00000449264 ZNF607Q96SK3 696 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 G6PC3Q9BUM1 346 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 BCL2L10Q9HD36 194 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 SEC14L3Q9UDX4 400 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 ZNF451Q9Y4E5 1061 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 LAMA5O15230 3695 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 TO15178 435 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 KIAA0513O60268 411 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 REM1O75628 298 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 ALPPP05187 535 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 ST13P50502 369 aaKnown RBP13.5□□□□□ -0.25
TNF-208ENST00000449264 RNF144AP50876 292 aaPredicted RBP13.5□□□□□ -0.25
TNF-208ENST00000449264 ELF3P78545 371 aaPredicted RBP13.5□□□□□ -0.25
TNF-208ENST00000449264 CDC20Q12834 499 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 CYBRD1Q53TN4 286 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 MTX3Q5HYI7 312 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 PRAMEF8Q5VWM4 474 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 PRAMEF7Q5VXH5 474 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 CCDC80Q76M96 950 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 SLC5A8Q8N695 610 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 ZNF614Q8N883 585 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 SLC22A8Q8TCC7 542 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 THAP4Q8WY91 577 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 TPD52L3Q96J77 140 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 DCBLD2Q96PD2 775 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 ADOQ96SZ5 270 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 DPH1Q9BZG8 443 aa13.5□□□□□ -0.25
TNF-208ENST00000449264 CACYBPQ9HB71 228 aaKnown RBP13.5□□□□□ -0.25
TNF-208ENST00000449264 MRTO4Q9UKD2 239 aaKnown RBP13.5□□□□□ -0.25
TNF-208ENST00000449264 CFAP47Q6ZTR5 3102 aa13.49□□□□□ -0.25
TNF-208ENST00000449264 URB1O60287 2271 aaKnown RBP13.49□□□□□ -0.25
TNF-208ENST00000449264 DSPPQ9NZW4 1301 aa13.49□□□□□ -0.25
TNF-208ENST00000449264 ANKRD11Q6UB99 2663 aaPredicted RBP13.49□□□□□ -0.25
TNF-208ENST00000449264 CENPVL1A0A0U1RR11 272 aa13.49□□□□□ -0.25
TNF-208ENST00000449264 TCRBV5S2A0A599 114 aa13.49□□□□□ -0.25
TNF-208ENST00000449264 AQP12BA6NM10 295 aa13.49□□□□□ -0.25
TNF-208ENST00000449264 MAN1A2O60476 641 aa13.49□□□□□ -0.25
TNF-208ENST00000449264 ZNF354AO60765 605 aaPredicted RBP13.49□□□□□ -0.25
TNF-208ENST00000449264 ITGA10O75578 1167 aa13.49□□□□□ -0.25
TNF-208ENST00000449264 IL33O95760 270 aa13.49□□□□□ -0.25
TNF-208ENST00000449264 PSMD4P55036 377 aaKnown RBP13.49□□□□□ -0.25
TNF-208ENST00000449264 AIMP2Q13155 320 aaKnown RBP13.49□□□□□ -0.25
TNF-208ENST00000449264 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms