RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 BTBD16Q32M84 506 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 CYBRD1Q53TN4 286 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 HLA-DQA1Q5Y7H0 255 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 PAPD5Q8NDF8 572 aaKnown RBP17.82■□□□□ 0.44
RPS28-202ENST00000449223 OR4N2Q8NGD1 307 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 CANT1Q8WVQ1 401 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 STMN2Q93045 179 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 FAM122AQ96E09 287 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 RMND5BQ96G75 393 aaPredicted RBP17.82■□□□□ 0.44
RPS28-202ENST00000449223 RSRC1Q96IZ7 334 aaKnown RBP17.82■□□□□ 0.44
RPS28-202ENST00000449223 SPATA5L1Q9BVQ7 753 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 MAGIXQ9H6Y5 334 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 ARMC1Q9NVT9 282 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 ADPRHL2Q9NX46 363 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 P4HTMQ9NXG6 502 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 MSRB2Q9Y3D2 182 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 PCDHGA10Q9Y5H3 936 aa17.82■□□□□ 0.44
RPS28-202ENST00000449223 MRPS18BQ9Y676 258 aaKnown RBP17.82■□□□□ 0.44
RPS28-202ENST00000449223 TRBV11-1A0A0K0K1C0 115 aa17.81■□□□□ 0.44
RPS28-202ENST00000449223 FCMRO60667 390 aa17.81■□□□□ 0.44
RPS28-202ENST00000449223 LCN1P31025 176 aa17.81■□□□□ 0.44
RPS28-202ENST00000449223 SELENOWP63302 87 aa17.81■□□□□ 0.44
RPS28-202ENST00000449223 TGIF1Q15583 401 aa17.81■□□□□ 0.44
RPS28-202ENST00000449223 GALNT10Q86SR1 603 aa17.81■□□□□ 0.44
RPS28-202ENST00000449223 ZNF619Q8N2I2 560 aa17.81■□□□□ 0.44
RPS28-202ENST00000449223 BCORP1Q8N888 145 aa17.81■□□□□ 0.44
RPS28-202ENST00000449223 SLCO4A1Q96BD0 722 aa17.81■□□□□ 0.44
RPS28-202ENST00000449223 PYURFQ96I23 114 aa17.81■□□□□ 0.44
RPS28-202ENST00000449223 UGT2B28Q9BY64 529 aa17.81■□□□□ 0.44
RPS28-202ENST00000449223 FBXL4Q9UKA2 621 aa17.81■□□□□ 0.44
RPS28-202ENST00000449223 OR10H1Q9Y4A9 318 aa17.81■□□□□ 0.44
RPS28-202ENST00000449223 ASPMQ8IZT6 3477 aa17.81■□□□□ 0.44
RPS28-202ENST00000449223 EXPH5Q8NEV8 1989 aa17.8■□□□□ 0.44
RPS28-202ENST00000449223 H3BNX3 289 aa17.8■□□□□ 0.44
RPS28-202ENST00000449223 SUV39H1O43463 412 aa17.8■□□□□ 0.44
RPS28-202ENST00000449223 PRKD3O94806 890 aa17.8■□□□□ 0.44
RPS28-202ENST00000449223 IL33O95760 270 aa17.8■□□□□ 0.44
RPS28-202ENST00000449223 IGKV1D-16P01601 117 aa17.8■□□□□ 0.44
RPS28-202ENST00000449223 SEMG1P04279 462 aa17.8■□□□□ 0.44
RPS28-202ENST00000449223 LIFP15018 202 aa17.8■□□□□ 0.44
RPS28-202ENST00000449223 ERFP50548 548 aa17.8■□□□□ 0.44
RPS28-202ENST00000449223 PSMD4P55036 377 aaKnown RBP17.8■□□□□ 0.44
RPS28-202ENST00000449223 DECR1Q16698 335 aa17.8■□□□□ 0.44
RPS28-202ENST00000449223 CRTC2Q53ET0 693 aaPredicted RBP17.8■□□□□ 0.44
RPS28-202ENST00000449223 CCNJQ5T5M9 372 aa17.8■□□□□ 0.44
RPS28-202ENST00000449223 FAM86B1Q8N7N1 296 aa17.8■□□□□ 0.44
RPS28-202ENST00000449223 COL21A1Q96P44 957 aa17.8■□□□□ 0.44
RPS28-202ENST00000449223 GAL3ST4Q96RP7 486 aa17.8■□□□□ 0.44
RPS28-202ENST00000449223 DOHHQ9BU89 302 aa17.8■□□□□ 0.44
RPS28-202ENST00000449223 RSPO3Q9BXY4 272 aaPredicted RBP17.8■□□□□ 0.44
RPS28-202ENST00000449223 DCLRE1BQ9H816 532 aa17.8■□□□□ 0.44
RPS28-202ENST00000449223 S100A14Q9HCY8 104 aa17.8■□□□□ 0.44
RPS28-202ENST00000449223 ANAPC2Q9UJX6 822 aa17.8■□□□□ 0.44
RPS28-202ENST00000449223 MRTO4Q9UKD2 239 aaKnown RBP17.8■□□□□ 0.44
RPS28-202ENST00000449223 ANGPTL2Q9UKU9 493 aa17.8■□□□□ 0.44
RPS28-202ENST00000449223 MKLN1Q9UL63 735 aa17.8■□□□□ 0.44
RPS28-202ENST00000449223 IFT52Q9Y366 437 aa17.8■□□□□ 0.44
RPS28-202ENST00000449223 AGAP5A6NIR3 686 aa17.79■□□□□ 0.44
RPS28-202ENST00000449223 NPIPB9F8W1W9 429 aa17.79■□□□□ 0.44
RPS28-202ENST00000449223 THBS1P07996 1170 aa17.79■□□□□ 0.44
RPS28-202ENST00000449223 CD247P20963 164 aa17.79■□□□□ 0.44
RPS28-202ENST00000449223 AP2B1P63010 937 aa17.79■□□□□ 0.44
RPS28-202ENST00000449223 CHAF1BQ13112 559 aa17.79■□□□□ 0.44
RPS28-202ENST00000449223 CLN3Q13286 438 aa17.79■□□□□ 0.44
RPS28-202ENST00000449223 NNATQ16517 81 aa17.79■□□□□ 0.44
RPS28-202ENST00000449223 FIGNL1Q6PIW4 674 aa17.79■□□□□ 0.44
RPS28-202ENST00000449223 ENPP6Q6UWR7 440 aa17.79■□□□□ 0.44
RPS28-202ENST00000449223 ARMC8Q8IUR7 673 aa17.79■□□□□ 0.44
RPS28-202ENST00000449223 PYDC1Q8WXC3 89 aa17.79■□□□□ 0.44
RPS28-202ENST00000449223 LZICQ8WZA0 190 aa17.79■□□□□ 0.44
RPS28-202ENST00000449223 DIO2Q92813 273 aa17.79■□□□□ 0.44
RPS28-202ENST00000449223 ZNF160Q9HCG1 818 aa17.79■□□□□ 0.44
RPS28-202ENST00000449223 FBXO34Q9NWN3 711 aa17.79■□□□□ 0.44
RPS28-202ENST00000449223 MYOTQ9UBF9 498 aa17.79■□□□□ 0.44
RPS28-202ENST00000449223 KRT36O76013 467 aa17.78■□□□□ 0.44
RPS28-202ENST00000449223 PABPC4LP0CB38 370 aaKnown RBP17.78■□□□□ 0.44
RPS28-202ENST00000449223 RAP2AP10114 183 aa17.78■□□□□ 0.44
RPS28-202ENST00000449223 ABCD3P28288 659 aa17.78■□□□□ 0.44
RPS28-202ENST00000449223 MAGEA2P43356 314 aa17.78■□□□□ 0.44
RPS28-202ENST00000449223 KCNJ5P48544 419 aa17.78■□□□□ 0.44
RPS28-202ENST00000449223 NR0B1P51843 470 aaKnown RBP17.78■□□□□ 0.44
RPS28-202ENST00000449223 FAM98BQ52LJ0 330 aaKnown RBP17.78■□□□□ 0.44
RPS28-202ENST00000449223 H3F3CQ6NXT2 135 aa17.78■□□□□ 0.44
RPS28-202ENST00000449223 OLIG3Q7RTU3 272 aa17.78■□□□□ 0.44
RPS28-202ENST00000449223 SLC34A3Q8N130 599 aa17.78■□□□□ 0.44
RPS28-202ENST00000449223 AMER2Q8N7J2 671 aa17.78■□□□□ 0.44
RPS28-202ENST00000449223 SPPL2AQ8TCT8 520 aa17.78■□□□□ 0.44
RPS28-202ENST00000449223 APOBEC4Q8WW27 367 aaKnown RBP17.78■□□□□ 0.44
RPS28-202ENST00000449223 ZG16BQ96DA0 208 aa17.78■□□□□ 0.44
RPS28-202ENST00000449223 DEFB126Q9BYW3 111 aa17.78■□□□□ 0.44
RPS28-202ENST00000449223 SEC14L3Q9UDX4 400 aa17.78■□□□□ 0.44
RPS28-202ENST00000449223 BAG5Q9UL15 447 aa17.78■□□□□ 0.44
RPS28-202ENST00000449223 AP4S1Q9Y587 144 aa17.78■□□□□ 0.44
RPS28-202ENST00000449223 SYT5O00445 386 aa17.77■□□□□ 0.44
RPS28-202ENST00000449223 PEX12O00623 359 aa17.77■□□□□ 0.44
RPS28-202ENST00000449223 TSPAN2O60636 221 aa17.77■□□□□ 0.44
RPS28-202ENST00000449223 NADKO95544 446 aaPredicted RBP17.77■□□□□ 0.44
RPS28-202ENST00000449223 ZNF682O95780 498 aa17.77■□□□□ 0.44
RPS28-202ENST00000449223 OPN1SWP03999 348 aa17.77■□□□□ 0.44
RPS28-202ENST00000449223 ALPPP05187 535 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms