RNA–Protein interactions for RNA: ENST00000448611.6

LMNA-208, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 1,943 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-208ENST00000448611 UGT2B15P54855 530 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 EEF1A1P68104 462 aaKnown RBP16.47■□□□□ 0.23
LMNA-208ENST00000448611 ZNF155Q12901 538 aaPredicted RBP16.47■□□□□ 0.23
LMNA-208ENST00000448611 LARS2Q15031 903 aaKnown RBP16.47■□□□□ 0.23
LMNA-208ENST00000448611 GPR68Q15743 365 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 MAPK14Q16539 360 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 SNAP47Q5SQN1 464 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 WDR74Q6RFH5 385 aaPredicted RBP16.47■□□□□ 0.23
LMNA-208ENST00000448611 B3GNT6Q6ZMB0 384 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 LINC00471Q8N535 108 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 OR13F1Q8NGS4 319 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 RHNO1Q9BSD3 238 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 LMF2Q9BU23 707 aaKnown RBP16.47■□□□□ 0.23
LMNA-208ENST00000448611 C11orf16Q9NQ32 467 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 ZNF226Q9NYT6 803 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 ERVK-18Q9QC07 812 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 SUSD2Q9UGT4 822 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 KCNE5Q9UJ90 142 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 ZNF232Q9UNY5 417 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 PCDHGB1Q9Y5G3 927 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 LAMA1P25391 3075 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 SDK1Q7Z5N4 2213 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 A0A1B0GTQ1 180 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 GXYLT2A0PJZ3 443 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 HRKO00198 91 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 HYAL3O43820 417 aaPredicted RBP16.47■□□□□ 0.23
LMNA-208ENST00000448611 PCMT1P22061 227 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 SLC5A2P31639 672 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 TRHRP34981 398 aaPredicted RBP16.47■□□□□ 0.23
LMNA-208ENST00000448611 STT3AP46977 705 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 ARL4DP49703 201 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 RGS8P57771 180 aaPredicted RBP16.47■□□□□ 0.23
LMNA-208ENST00000448611 TAS2R41P59536 307 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 CSNK2BP67870 215 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 POU6F2P78424 691 aaPredicted RBP16.47■□□□□ 0.23
LMNA-208ENST00000448611 TARDBPQ13148 414 aaKnown RBP eCLIP16.47■□□□□ 0.23
LMNA-208ENST00000448611 PLK5Q496M5 336 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 GTF2IRD2BQ6EKJ0 949 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 GTF2IRD2Q86UP8 949 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 C11orf74Q86VG3 221 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 GATAD2AQ86YP4 633 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 CLVS1Q8IUQ0 354 aaPredicted RBP16.47■□□□□ 0.23
LMNA-208ENST00000448611 CCDC103Q8IW40 242 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 MAML2Q8IZL2 1156 aaPredicted RBP16.47■□□□□ 0.23
LMNA-208ENST00000448611 DEPDC4Q8N2C3 294 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 OR4K5Q8NGD3 323 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 OR1L3Q8NH93 324 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 CCDC74AQ96AQ1 378 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 CNDP2Q96KP4 475 aaKnown RBP16.47■□□□□ 0.23
LMNA-208ENST00000448611 DGAT2Q96PD7 388 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 CACYBPQ9HB71 228 aaKnown RBP16.47■□□□□ 0.23
LMNA-208ENST00000448611 SNX5Q9Y5X3 404 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 MAU2Q9Y6X3 613 aa16.47■□□□□ 0.23
LMNA-208ENST00000448611 CPSF4LA6NMK7 179 aaKnown RBP16.46■□□□□ 0.23
LMNA-208ENST00000448611 ZNF701M0R085 212 aaPredicted RBP16.46■□□□□ 0.23
LMNA-208ENST00000448611 BRINP1O60477 761 aa16.46■□□□□ 0.23
LMNA-208ENST00000448611 FAM20BO75063 409 aa16.46■□□□□ 0.23
LMNA-208ENST00000448611 SEC14L2O76054 403 aa16.46■□□□□ 0.23
LMNA-208ENST00000448611 DBIP07108 87 aaKnown RBP16.46■□□□□ 0.23
LMNA-208ENST00000448611 FOLR1P15328 257 aa16.46■□□□□ 0.23
LMNA-208ENST00000448611 SSTR4P31391 388 aa16.46■□□□□ 0.23
LMNA-208ENST00000448611 LSM11P83369 360 aaKnown RBP eCLIP16.46■□□□□ 0.232e-7■□□□□ 10
LMNA-208ENST00000448611 HOXC5Q00444 222 aa16.46■□□□□ 0.23
LMNA-208ENST00000448611 PSG6Q00889 435 aa16.46■□□□□ 0.23
LMNA-208ENST00000448611 TEKQ02763 1124 aa16.46■□□□□ 0.23
LMNA-208ENST00000448611 CSTF1Q05048 431 aaKnown RBP16.46■□□□□ 0.23
LMNA-208ENST00000448611 ILKQ13418 452 aa16.46■□□□□ 0.23
LMNA-208ENST00000448611 TMEM236Q5W0B7 351 aa16.46■□□□□ 0.23
LMNA-208ENST00000448611 FIGNL1Q6PIW4 674 aa16.46■□□□□ 0.23
LMNA-208ENST00000448611 CD300LDQ6UXZ3 194 aa16.46■□□□□ 0.23
LMNA-208ENST00000448611 TTLL10Q6ZVT0 673 aa16.46■□□□□ 0.23
LMNA-208ENST00000448611 ZER1Q7Z7L7 766 aa16.46■□□□□ 0.23
LMNA-208ENST00000448611 ALDH16A1Q8IZ83 802 aa16.46■□□□□ 0.23
LMNA-208ENST00000448611 ZNF540Q8NDQ6 660 aa16.46■□□□□ 0.23
LMNA-208ENST00000448611 SAP25Q8TEE9 199 aa16.46■□□□□ 0.23
LMNA-208ENST00000448611 PMM1Q92871 262 aa16.46■□□□□ 0.23
LMNA-208ENST00000448611 FOLH1BQ9HBA9 442 aa16.46■□□□□ 0.23
LMNA-208ENST00000448611 POLE3Q9NRF9 147 aa16.46■□□□□ 0.23
LMNA-208ENST00000448611 SEMA4GQ9NTN9 838 aa16.46■□□□□ 0.23
LMNA-208ENST00000448611 CDC14AQ9UNH5 594 aa16.46■□□□□ 0.23
LMNA-208ENST00000448611 CYP7B1O75881 506 aa16.45■□□□□ 0.22
LMNA-208ENST00000448611 SOX30O94993 753 aa16.45■□□□□ 0.22
LMNA-208ENST00000448611 CCNYL3P0C7X3 344 aa16.45■□□□□ 0.22
LMNA-208ENST00000448611 MSL3P1P0C860 447 aa16.45■□□□□ 0.22
LMNA-208ENST00000448611 MMP11P24347 488 aa16.45■□□□□ 0.22
LMNA-208ENST00000448611 EIPR1Q53HC9 387 aa16.45■□□□□ 0.22
LMNA-208ENST00000448611 ENTPD8Q5MY95 495 aa16.45■□□□□ 0.22
LMNA-208ENST00000448611 C1orf94Q6P1W5 598 aa16.45■□□□□ 0.22
LMNA-208ENST00000448611 KMT5CQ86Y97 462 aa16.45■□□□□ 0.22
LMNA-208ENST00000448611 FKBP10Q96AY3 582 aa16.45■□□□□ 0.22
LMNA-208ENST00000448611 ISOC1Q96CN7 298 aa16.45■□□□□ 0.22
LMNA-208ENST00000448611 MVB12AQ96EY5 273 aa16.45■□□□□ 0.22
LMNA-208ENST00000448611 VSTM2LQ96N03 204 aa16.45■□□□□ 0.22
LMNA-208ENST00000448611 NUDT22Q9BRQ3 303 aa16.45■□□□□ 0.22
LMNA-208ENST00000448611 DUSP23Q9BVJ7 150 aa16.45■□□□□ 0.22
LMNA-208ENST00000448611 CCDC90BQ9GZT6 254 aa16.45■□□□□ 0.22
LMNA-208ENST00000448611 LHPPQ9H008 270 aa16.45■□□□□ 0.22
LMNA-208ENST00000448611 POLR2J3Q9H1A7 115 aaKnown RBP16.45■□□□□ 0.22
LMNA-208ENST00000448611 NECTIN3Q9NQS3 549 aa16.45■□□□□ 0.22
LMNA-208ENST00000448611 FSCN3Q9NQT6 498 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms