RNA–Protein interactions for RNA: ENST00000447267.4

SDCBP-205, Transcript of syndecan binding protein, humanhuman

TSL 3 BASIC

Gene SDCBP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-205ENST00000447267 TRIM3O75382 744 aaPredicted RBP4.27□□□□□ -1.73
SDCBP-205ENST00000447267 TPPPO94811 219 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 NSA2O95478 260 aaKnown RBP4.27□□□□□ -1.73
SDCBP-205ENST00000447267 HLA-DQB2P05538 268 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 CHMP24386 653 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 RPS6KA3P51812 740 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 CDH6P55285 790 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 FKBP3Q00688 224 aaKnown RBP4.27□□□□□ -1.73
SDCBP-205ENST00000447267 CHRNB3Q05901 458 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 CETN1Q12798 172 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 PKP1Q13835 747 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 GRB7Q14451 532 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 NDUFA9Q16795 377 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 SAXO2Q658L1 398 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 FIP1L1Q6UN15 594 aaKnown RBP4.27□□□□□ -1.73
SDCBP-205ENST00000447267 UGT2A3Q6UWM9 527 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 PCGF5Q86SE9 256 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 CCDC25Q86WR0 208 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 CEP57L1Q8IYX8 460 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 ADGRG5Q8IZF4 528 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 LYG1Q8N1E2 194 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 ATPAF2Q8N5M1 289 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 TEX29Q8N6K0 151 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 CNTD1Q8N815 330 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 C11orf44Q8N8P7 122 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 FAM83FQ8NEG4 500 aaPredicted RBP4.27□□□□□ -1.73
SDCBP-205ENST00000447267 OR10G3Q8NGC4 313 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 OR2L8Q8NGY9 312 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 CLDND2Q8NHS1 167 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 CFAP61Q8NHU2 1237 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 RDH11Q8TC12 318 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 MAGEC3Q8TD91 643 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 MCOLN3Q8TDD5 553 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 PAQR8Q8TEZ7 354 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 ANKRD7Q92527 254 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 CCDC47Q96A33 483 aaKnown RBP4.27□□□□□ -1.73
SDCBP-205ENST00000447267 CTHRC1Q96CG8 243 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 VMP1Q96GC9 406 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 CSPG4P5Q96PW8 444 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 SH3GL3Q99963 347 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 SNRNP25Q9BV90 132 aaKnown RBP4.27□□□□□ -1.73
SDCBP-205ENST00000447267 ADGRE3Q9BY15 652 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 UBQLN3Q9H347 655 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 FAM96AQ9H5X1 160 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 FOLH1BQ9HBA9 442 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 NGBQ9NPG2 151 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 SMYD2Q9NRG4 433 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 RBM22Q9NW64 420 aaKnown RBP eCLIP4.27□□□□□ -1.73
SDCBP-205ENST00000447267 MAN1B1Q9UKM7 699 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 CORO1CQ9ULV4 474 aaPredicted RBP4.27□□□□□ -1.73
SDCBP-205ENST00000447267 CLEC4AQ9UMR7 237 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 HPSEQ9Y251 543 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 GPR52Q9Y2T5 361 aa4.27□□□□□ -1.73
SDCBP-205ENST00000447267 PLECQ15149 4684 aaKnown RBP4.27□□□□□ -1.73
SDCBP-205ENST00000447267 MDFIC2A0A1B0GVS7 189 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 TCRBV5S1A1TA0A578 114 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 LINC00473A8K010 186 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 GOLGA8MH3BSY2 632 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 MPPED1O15442 326 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 XPNPEP2O43895 674 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 PROP1O75360 226 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 SLC43A1O75387 559 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 NDUFA7O95182 113 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 LSM8O95777 96 aaKnown RBP4.26□□□□□ -1.73
SDCBP-205ENST00000447267 ACTL6AO96019 429 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 CD1AP06126 327 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 DAOP14920 347 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 CDKN1CP49918 316 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-205ENST00000447267 CSE1LP55060 971 aaKnown RBP4.26□□□□□ -1.73
SDCBP-205ENST00000447267 CLDN15P56746 228 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 OGDHQ02218 1023 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.26□□□□□ -1.73
SDCBP-205ENST00000447267 FUT7Q11130 342 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 ASPHQ12797 758 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 BMPR2Q13873 1038 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 STK38Q15208 465 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 ZNF791Q3KP31 576 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-205ENST00000447267 PPP6R3Q5H9R7 873 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-205ENST00000447267 TCHHL1Q5QJ38 904 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-205ENST00000447267 HHATQ5VTY9 493 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 RESP18Q5W5W9 173 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 OR2A2Q6IF42 318 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 ZNF449Q6P9G9 518 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 SLC22A25Q6T423 547 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 OPN5Q6U736 354 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 CENPQQ7L2Z9 268 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-205ENST00000447267 FAM71AQ8IYT1 594 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 SPATA6LQ8N4H0 392 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 DRAXINQ8NBI3 349 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-205ENST00000447267 PDPRQ8NCN5 879 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 C1orf162Q8NEQ5 155 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-205ENST00000447267 Q8NFD4 153 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 IL17RDQ8NFM7 739 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 OR2A1Q8NGT9 310 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 GABPB2Q8TAK5 448 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-205ENST00000447267 ADAMTS16Q8TE57 1224 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 RERGQ96A58 199 aaPredicted RBP4.26□□□□□ -1.73
SDCBP-205ENST00000447267 TBC1D20Q96BZ9 403 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 MTBPQ96DY7 904 aa4.26□□□□□ -1.73
SDCBP-205ENST00000447267 DCUN1D1Q96GG9 259 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 179.5 ms