RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 OR10H2O60403 315 aa16.25■□□□□ 0.19
SMC6-206ENST00000446852 BCAS1O75363 584 aaPredicted RBP16.25■□□□□ 0.19
SMC6-206ENST00000446852 STSP08842 583 aa16.25■□□□□ 0.19
SMC6-206ENST00000446852 IFI6P09912 130 aa16.25■□□□□ 0.19
SMC6-206ENST00000446852 CCNYL3P0C7X3 344 aa16.25■□□□□ 0.19
SMC6-206ENST00000446852 TNNI3P19429 210 aa16.25■□□□□ 0.19
SMC6-206ENST00000446852 RPS4Y1P22090 263 aaKnown RBP16.25■□□□□ 0.19
SMC6-206ENST00000446852 ALDH4A1P30038 563 aa16.25■□□□□ 0.19
SMC6-206ENST00000446852 FNTBP49356 437 aa16.25■□□□□ 0.19
SMC6-206ENST00000446852 SLC13A2Q13183 592 aa16.25■□□□□ 0.19
SMC6-206ENST00000446852 ERV3-1Q14264 604 aa16.25■□□□□ 0.19
SMC6-206ENST00000446852 UBE2UQ5VVX9 321 aa16.25■□□□□ 0.19
SMC6-206ENST00000446852 SLC36A4Q6YBV0 504 aa16.25■□□□□ 0.19
SMC6-206ENST00000446852 METTL27Q8N6F8 245 aaPredicted RBP16.25■□□□□ 0.19
SMC6-206ENST00000446852 IQCF1Q8N6M8 205 aa16.25■□□□□ 0.19
SMC6-206ENST00000446852 GPR151Q8TDV0 419 aa16.25■□□□□ 0.19
SMC6-206ENST00000446852 MYDGFQ969H8 173 aa16.25■□□□□ 0.19
SMC6-206ENST00000446852 PLCL2Q9UPR0 1127 aa16.25■□□□□ 0.19
SMC6-206ENST00000446852 UNC13CQ8NB66 2214 aa16.25■□□□□ 0.19
SMC6-206ENST00000446852 NPIPA5A0A0B4J1W7 369 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 GXYLT2A0PJZ3 443 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 HYKKA2RU49 373 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 NPIPA7E9PJI5 369 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 PEX12O00623 359 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 MPZL2O60487 215 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 STX11O75558 287 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 NPIPA8P0DM63 369 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 S1PR1P21453 382 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 CXCL12P48061 93 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 SPCS2Q15005 226 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 LARS2Q15031 903 aaKnown RBP16.24■□□□□ 0.19
SMC6-206ENST00000446852 TRAM2Q15035 370 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 ZCCHC12Q6PEW1 402 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 FIGNL1Q6PIW4 674 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 ZNF619Q8N2I2 560 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 OR52R1Q8NGF1 315 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 SLC38A4Q969I6 547 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 SAP130Q9H0E3 1048 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 TMEM184BQ9Y519 407 aaPredicted RBP16.24■□□□□ 0.19
SMC6-206ENST00000446852 CLDN16Q9Y5I7 305 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 CACNA1EQ15878 2313 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 HRKO00198 91 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 KIAA0513O60268 411 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 FOXD2O60548 495 aaPredicted RBP16.24■□□□□ 0.19
SMC6-206ENST00000446852 GABARAPO95166 117 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 NSA2O95478 260 aaKnown RBP16.24■□□□□ 0.19
SMC6-206ENST00000446852 THBS1P07996 1170 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 ADRA2AP08913 450 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 STT3AP46977 705 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 RNF144AP50876 292 aaPredicted RBP16.24■□□□□ 0.19
SMC6-206ENST00000446852 ZNF136P52737 540 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 ALDH6A1Q02252 535 aaKnown RBP16.24■□□□□ 0.19
SMC6-206ENST00000446852 ST3GAL4Q11206 333 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 COX10Q12887 443 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 FAM53BQ14153 422 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 TBCEQ15813 527 aaPredicted RBP16.24■□□□□ 0.19
SMC6-206ENST00000446852 NDUFA9Q16795 377 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 NKAIN4Q8IVV8 208 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 SDR16C5Q8N3Y7 309 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 NR4A3Q92570 626 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 MCHR1Q99705 422 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 ZNF232Q9UNY5 417 aa16.24■□□□□ 0.19
SMC6-206ENST00000446852 RHPN2P1A8MT19 583 aa16.23■□□□□ 0.19
SMC6-206ENST00000446852 AP3D1O14617 1153 aa16.23■□□□□ 0.19
SMC6-206ENST00000446852 BCAT2O15382 392 aaPredicted RBP16.23■□□□□ 0.19
SMC6-206ENST00000446852 GABRA3P34903 492 aa16.23■□□□□ 0.19
SMC6-206ENST00000446852 ST13P50502 369 aaKnown RBP16.23■□□□□ 0.19
SMC6-206ENST00000446852 AFF3P51826 1226 aaKnown RBP16.23■□□□□ 0.19
SMC6-206ENST00000446852 SNRPGP62308 76 aaKnown RBP16.23■□□□□ 0.19
SMC6-206ENST00000446852 BTG2P78543 158 aa16.23■□□□□ 0.19
SMC6-206ENST00000446852 OCA2Q04671 838 aa16.23■□□□□ 0.19
SMC6-206ENST00000446852 ST3GAL3Q11203 375 aa16.23■□□□□ 0.19
SMC6-206ENST00000446852 MAP4K2Q12851 820 aa16.23■□□□□ 0.19
SMC6-206ENST00000446852 ZNF155Q12901 538 aaPredicted RBP16.23■□□□□ 0.19
SMC6-206ENST00000446852 KCNAB1Q14722 419 aa16.23■□□□□ 0.19
SMC6-206ENST00000446852 PLEKHM3Q6ZWE6 761 aa16.23■□□□□ 0.19
SMC6-206ENST00000446852 ZAR1Q86SH2 424 aa16.23■□□□□ 0.19
SMC6-206ENST00000446852 KIF18BQ86Y91 864 aa16.23■□□□□ 0.19
SMC6-206ENST00000446852 GALNT12Q8IXK2 581 aa16.23■□□□□ 0.19
SMC6-206ENST00000446852 HOXB13Q92826 284 aaPredicted RBP16.23■□□□□ 0.19
SMC6-206ENST00000446852 SPRTNQ9H040 489 aaPredicted RBP16.23■□□□□ 0.19
SMC6-206ENST00000446852 CAPN10Q9HC96 672 aa16.23■□□□□ 0.19
SMC6-206ENST00000446852 PDE7BQ9NP56 450 aa16.23■□□□□ 0.19
SMC6-206ENST00000446852 IRAK4Q9NWZ3 460 aa16.23■□□□□ 0.19
SMC6-206ENST00000446852 LRIT1Q9P2V4 623 aa16.23■□□□□ 0.19
SMC6-206ENST00000446852 RP1P56715 2156 aa16.23■□□□□ 0.19
SMC6-206ENST00000446852 SH3D21A4FU49 640 aa16.23■□□□□ 0.19
SMC6-206ENST00000446852 ENTPD6O75354 484 aa16.23■□□□□ 0.19
SMC6-206ENST00000446852 TGFBR2P37173 567 aa16.23■□□□□ 0.19
SMC6-206ENST00000446852 C21orf59P57076 290 aa16.23■□□□□ 0.19
SMC6-206ENST00000446852 SKP1P63208 163 aa16.23■□□□□ 0.19
SMC6-206ENST00000446852 PRICKLE2Q7Z3G6 844 aa16.23■□□□□ 0.19
SMC6-206ENST00000446852 PLA2G12AQ9BZM1 189 aa16.23■□□□□ 0.19
SMC6-206ENST00000446852 CLN6Q9NWW5 311 aa16.23■□□□□ 0.19
SMC6-206ENST00000446852 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.23■□□□□ 0.19
SMC6-206ENST00000446852 CTNSO60931 367 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 NKX2-2O95096 273 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 PRG2P13727 222 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 OR1D5P58170 312 aa16.22■□□□□ 0.19
SMC6-206ENST00000446852 IGLV3-21P80748 117 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms