RNA–Protein interactions for RNA: ENST00000445623.1

TIMP1-204, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 2

Gene TIMP1, Length 595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-204ENST00000445623 A4GALTQ9NPC4 353 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 POLE3Q9NRF9 147 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 ADA2Q9NZK5 511 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 DMXL2Q8TDJ6 3036 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 EXPH5Q8NEV8 1989 aa12.14□□□□□ -0.47
TIMP1-204ENST00000445623 ZFHX4Q86UP3 3567 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 MAP1BP46821 2468 aaKnown RBP12.13□□□□□ -0.47
TIMP1-204ENST00000445623 SLC28A2O43868 658 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 TSPAN2O60636 221 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 DPM1O60762 260 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 TNFRSF21O75509 655 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 STX11O75558 287 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 OR6B1O95007 311 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 WDPCPO95876 746 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 C1QCP02747 245 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 GUSBP08236 651 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 ARAFP10398 606 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 SFTPCP11686 197 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 EEFSECP57772 596 aaKnown RBP12.13□□□□□ -0.47
TIMP1-204ENST00000445623 TUBA3CQ13748 450 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 SELPLGQ14242 412 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 ZNF791Q3KP31 576 aaPredicted RBP12.13□□□□□ -0.47
TIMP1-204ENST00000445623 SPATS1Q496A3 300 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 DNAL1Q4LDG9 190 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 PRAMEF8Q5VWM4 474 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 PRAMEF7Q5VXH5 474 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 TUBA3EQ6PEY2 450 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 FIGNL1Q6PIW4 674 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 LYPD8Q6UX82 237 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 IGFL3Q6UXB1 125 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 IL20RBQ6UXL0 311 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 BNC2Q6ZN30 1099 aaPredicted RBP12.13□□□□□ -0.47
TIMP1-204ENST00000445623 SLC15A3Q8IY34 581 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 DEFB107AQ8IZN7 70 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 ARHGAP24Q8N264 748 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 ZNF527Q8NB42 609 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 GOLM1Q8NBJ4 401 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 FAM13CQ8NE31 585 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 TNIP2Q8NFZ5 429 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 C9orf43Q8TAL5 461 aaPredicted RBP12.13□□□□□ -0.47
TIMP1-204ENST00000445623 FAM110BQ8TC76 370 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 TTC9Q92623 222 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 EFHD2Q96C19 240 aaPredicted RBP12.13□□□□□ -0.47
TIMP1-204ENST00000445623 ABHD17AQ96GS6 310 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 REXO5Q96IC2 774 aaKnown RBP12.13□□□□□ -0.47
TIMP1-204ENST00000445623 ADOQ96SZ5 270 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 SECISBP2Q96T21 854 aaKnown RBP12.13□□□□□ -0.47
TIMP1-204ENST00000445623 SDF2Q99470 211 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 TRIM8Q9BZR9 551 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 HOXD1Q9GZZ0 328 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.13□□□□□ -0.47
TIMP1-204ENST00000445623 TRIM45Q9H8W5 580 aaPredicted RBP12.13□□□□□ -0.47
TIMP1-204ENST00000445623 ZBTB20Q9HC78 741 aaPredicted RBP12.13□□□□□ -0.47
TIMP1-204ENST00000445623 TIMMDC1Q9NPL8 285 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 LRFN1Q9P244 771 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 ABCD2Q9UBJ2 740 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 ANGPT4Q9Y264 503 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 WDR45Q9Y484 360 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 KCNE3Q9Y6H6 103 aa12.13□□□□□ -0.47
TIMP1-204ENST00000445623 FAM220BPB1ANY3 271 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 ERVH48-1M5A8F1 160 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 GYG2O15488 501 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 ZNF354AO60765 605 aaPredicted RBP12.12□□□□□ -0.47
TIMP1-204ENST00000445623 BCHEP06276 602 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 HPGDP15428 266 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 CD46P15529 392 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 CD96P40200 585 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 CLK3P49761 638 aaKnown RBP12.12□□□□□ -0.47
TIMP1-204ENST00000445623 FBXW4P57775 412 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 CDK6Q00534 326 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 SCARB2Q14108 478 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 OR1C1Q15619 314 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 SYPL1Q16563 259 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 LINC00303Q3SY05 128 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 FLYWCH1Q4VC44 716 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 LACTB2Q53H82 288 aaPredicted RBP12.12□□□□□ -0.47
TIMP1-204ENST00000445623 SAMD4BQ5PRF9 694 aaKnown RBP12.12□□□□□ -0.47
TIMP1-204ENST00000445623 CCNJQ5T5M9 372 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 INTS11Q5TA45 600 aaKnown RBP12.12□□□□□ -0.47
TIMP1-204ENST00000445623 LRRC74BQ6ZQY2 392 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 RINLQ6ZS11 566 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 NET1Q7Z628 596 aaPredicted RBP12.12□□□□□ -0.47
TIMP1-204ENST00000445623 HIPK4Q8NE63 616 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 OR2T12Q8NG77 320 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 OR5M3Q8NGP4 307 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 BBS10Q8TAM1 723 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 OIT3Q8WWZ8 545 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 PMM1Q92871 262 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 C5orf34Q96MH7 638 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 ZNF350Q9GZX5 532 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 ALG2Q9H553 416 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 CMTM6Q9NX76 183 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 ANKRD10Q9NXR5 420 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 TMEM181Q9P2C4 612 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 PCDHGA10Q9Y5H3 936 aa12.12□□□□□ -0.47
TIMP1-204ENST00000445623 CELSR3Q9NYQ7 3312 aa12.11□□□□□ -0.47
TIMP1-204ENST00000445623 TRAV17A0A0B4J275 112 aa12.11□□□□□ -0.47
TIMP1-204ENST00000445623 NME4O00746 187 aa12.11□□□□□ -0.47
TIMP1-204ENST00000445623 SCDO00767 359 aa12.11□□□□□ -0.47
TIMP1-204ENST00000445623 UGT2B11O75310 529 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms