RNA–Protein interactions for RNA: ENST00000445336.2

BRAFP1-201, Transcript of BRAF pseudogene 1, humanhuman

BASIC

Gene BRAFP1, Length 2,703 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP1-201ENST00000445336 NIPA2Q8N8Q9 360 aa5.4□□□□□ -1.54
BRAFP1-201ENST00000445336 ANKS4BQ8N8V4 417 aa5.4□□□□□ -1.54
BRAFP1-201ENST00000445336 FADS6Q8N9I5 356 aa5.4□□□□□ -1.54
BRAFP1-201ENST00000445336 TTLQ8NG68 377 aa5.4□□□□□ -1.54
BRAFP1-201ENST00000445336 STYXQ8WUJ0 223 aa5.4□□□□□ -1.54
BRAFP1-201ENST00000445336 MRGPRX2Q96LB1 330 aa5.4□□□□□ -1.54
BRAFP1-201ENST00000445336 LIN28AQ9H9Z2 209 aaKnown RBP5.4□□□□□ -1.54
BRAFP1-201ENST00000445336 ZBTB26Q9HCK0 441 aa5.4□□□□□ -1.54
BRAFP1-201ENST00000445336 NTMQ9P121 344 aa5.4□□□□□ -1.54
BRAFP1-201ENST00000445336 ADARB2-AS1A8MUL3 147 aa5.4□□□□□ -1.55
BRAFP1-201ENST00000445336 FBXO24O75426 580 aa5.4□□□□□ -1.55
BRAFP1-201ENST00000445336 AQP8O94778 261 aa5.4□□□□□ -1.55
BRAFP1-201ENST00000445336 ZSCAN22P10073 491 aaPredicted RBP5.4□□□□□ -1.55
BRAFP1-201ENST00000445336 ZFXP17010 805 aaPredicted RBP5.4□□□□□ -1.55
BRAFP1-201ENST00000445336 PTNP21246 168 aa5.4□□□□□ -1.55
BRAFP1-201ENST00000445336 RPS3P23396 243 aaKnown RBP eCLIP5.4□□□□□ -1.55
BRAFP1-201ENST00000445336 STX4Q12846 297 aa5.4□□□□□ -1.55
BRAFP1-201ENST00000445336 SGCBQ16585 318 aa5.4□□□□□ -1.55
BRAFP1-201ENST00000445336 LRRN1Q6UXK5 716 aa5.4□□□□□ -1.55
BRAFP1-201ENST00000445336 MAP7D3Q8IWC1 876 aa5.4□□□□□ -1.55
BRAFP1-201ENST00000445336 ZNF433Q8N7K0 673 aaPredicted RBP5.4□□□□□ -1.55
BRAFP1-201ENST00000445336 WDSUB1Q8N9V3 476 aa5.4□□□□□ -1.55
BRAFP1-201ENST00000445336 RNF128Q8TEB7 428 aa5.4□□□□□ -1.55
BRAFP1-201ENST00000445336 WIPF2Q8TF74 440 aaPredicted RBP5.4□□□□□ -1.55
BRAFP1-201ENST00000445336 TMCO6Q96DC7 493 aa5.4□□□□□ -1.55
BRAFP1-201ENST00000445336 ITCHQ96J02 903 aa5.4□□□□□ -1.55
BRAFP1-201ENST00000445336 MUS81Q96NY9 551 aa5.4□□□□□ -1.55
BRAFP1-201ENST00000445336 CDK15Q96Q40 435 aa5.4□□□□□ -1.55
BRAFP1-201ENST00000445336 TCF12Q99081 682 aa5.4□□□□□ -1.55
BRAFP1-201ENST00000445336 PITHD1Q9GZP4 211 aaPredicted RBP5.4□□□□□ -1.55
BRAFP1-201ENST00000445336 NDST4Q9H3R1 872 aa5.4□□□□□ -1.55
BRAFP1-201ENST00000445336 BCO1Q9HAY6 547 aa5.4□□□□□ -1.55
BRAFP1-201ENST00000445336 TIGARQ9NQ88 270 aa5.4□□□□□ -1.55
BRAFP1-201ENST00000445336 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.4□□□□□ -1.55
BRAFP1-201ENST00000445336 DCTN4Q9UJW0 460 aa5.4□□□□□ -1.55
BRAFP1-201ENST00000445336 ZNF346Q9UL40 294 aaKnown RBP5.4□□□□□ -1.55
BRAFP1-201ENST00000445336 SPACA6W5XKT8 324 aa5.4□□□□□ -1.55
BRAFP1-201ENST00000445336 A0A087WZY1 265 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 IQANK1A0A1B0GTG1 560 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 TMEM191CA6NGB0 347 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 EFCAB8A8MWE9 144 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 H3BMM5 538 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 ADAMDEC1O15204 470 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 TP73O15350 636 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 FAM20BO75063 409 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 RP2O75695 350 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 TYK2P29597 1187 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 SESN2P58004 480 aaPredicted RBP5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 PLIN5Q00G26 463 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 EFR3AQ14156 821 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 TMEM44Q2T9K0 475 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 TBRG1Q3YBR2 411 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 CDKAL1Q5VV42 579 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 UBQLNLQ8IYU4 475 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 OR7G1Q8NGA0 311 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 RUNDC3BQ96NL0 473 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 SEBOXQ9HB31 216 aaPredicted RBP5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 ETNK1Q9HBU6 452 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 SERHLQ9NQF3 203 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 NKIRAS2Q9NYR9 191 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 PURGQ9UJV8 347 aaKnown RBP5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 ZNF816-ZNF321PA0A0X1KG74 233 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 ZNF724A8MTY0 619 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 B3GALT2O43825 422 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 ANXA9O76027 345 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 LY6G6CO95867 125 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 NT5EP21589 574 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 RPS13P62277 151 aaKnown RBP5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 SLC3A1Q07837 685 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 ADIPOQQ15848 244 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 ELFN2Q5R3F8 820 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 ESPNLQ6ZVH7 1005 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 C17orf64Q86WR6 236 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 MPP5Q8N3R9 675 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 NXNL1Q96CM4 212 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 ARL5BQ96KC2 179 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 KCNS3Q9BQ31 491 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 CCDC177Q9NQR7 707 aaPredicted RBP5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 SDHAF3Q9NRP4 125 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 HSPG2P98160 4391 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 ZNF860A6NHJ4 632 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 CYR61O00622 381 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 NRDCO43847 1150 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 ICOSLGO75144 302 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 GUCA1CO95843 209 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 PECAM1P16284 738 aaPredicted RBP5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 RPL7AP62424 266 aaKnown RBP5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 OGDHQ02218 1023 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 EGR3Q06889 387 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 DBPQ10586 325 aaPredicted RBP5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 PDK3Q15120 406 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 ADRM1Q16186 407 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 CCNG2Q16589 344 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 HLA-DQA1Q5Y7H0 255 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 WDR75Q8IWA0 830 aaKnown RBP5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 OR52E2Q8NGJ4 325 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 PEX13Q92968 403 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 TRIM11Q96F44 468 aa5.39□□□□□ -1.55
BRAFP1-201ENST00000445336 SCAND2PQ9GZW5 306 aaPredicted RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms