RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 GPR55Q9Y2T6 319 aaPredicted RBP17.58■□□□□ 0.4
SEMA3D-202ENST00000444867 TNRC6BQ9UPQ9 1833 aaKnown RBP17.57■□□□□ 0.4
SEMA3D-202ENST00000444867 ZNF749O43361 778 aa17.57■□□□□ 0.4
SEMA3D-202ENST00000444867 OR5F1O95221 314 aa17.57■□□□□ 0.4
SEMA3D-202ENST00000444867 GALNSP34059 522 aa17.57■□□□□ 0.4
SEMA3D-202ENST00000444867 HSD17B7P56937 341 aa17.57■□□□□ 0.4
SEMA3D-202ENST00000444867 ZNF155Q12901 538 aaPredicted RBP17.57■□□□□ 0.4
SEMA3D-202ENST00000444867 FOXD4Q12950 439 aaPredicted RBP17.57■□□□□ 0.4
SEMA3D-202ENST00000444867 DYNC1I2Q13409 638 aaKnown RBP17.57■□□□□ 0.4
SEMA3D-202ENST00000444867 ZNHIT3Q15649 155 aaPredicted RBP17.57■□□□□ 0.4
SEMA3D-202ENST00000444867 ZNF836Q6ZNA1 936 aa17.57■□□□□ 0.4
SEMA3D-202ENST00000444867 CCDC103Q8IW40 242 aa17.57■□□□□ 0.4
SEMA3D-202ENST00000444867 SLC25A45Q8N413 288 aa17.57■□□□□ 0.4
SEMA3D-202ENST00000444867 GPR151Q8TDV0 419 aa17.57■□□□□ 0.4
SEMA3D-202ENST00000444867 TRUB1Q8WWH5 349 aaKnown RBP17.57■□□□□ 0.4
SEMA3D-202ENST00000444867 MMABQ96EY8 250 aaPredicted RBP17.57■□□□□ 0.4
SEMA3D-202ENST00000444867 RBM18Q96H35 190 aaKnown RBP17.57■□□□□ 0.4
SEMA3D-202ENST00000444867 SEMA5BQ9P283 1151 aa17.57■□□□□ 0.4
SEMA3D-202ENST00000444867 PCDH15Q96QU1 1955 aa17.57■□□□□ 0.4
SEMA3D-202ENST00000444867 CLCA1A8K7I4 914 aa17.56■□□□□ 0.4
SEMA3D-202ENST00000444867 MT-ND2P03891 347 aa17.56■□□□□ 0.4
SEMA3D-202ENST00000444867 S1PR1P21453 382 aa17.56■□□□□ 0.4
SEMA3D-202ENST00000444867 CNR2P34972 360 aa17.56■□□□□ 0.4
SEMA3D-202ENST00000444867 ARRB1P49407 418 aaPredicted RBP17.56■□□□□ 0.4
SEMA3D-202ENST00000444867 OR1D5P58170 312 aa17.56■□□□□ 0.4
SEMA3D-202ENST00000444867 SNRPGP62308 76 aaKnown RBP17.56■□□□□ 0.4
SEMA3D-202ENST00000444867 ENTPD8Q5MY95 495 aa17.56■□□□□ 0.4
SEMA3D-202ENST00000444867 NKAIN2Q5VXU1 208 aa17.56■□□□□ 0.4
SEMA3D-202ENST00000444867 C12orf73Q69YU5 71 aa17.56■□□□□ 0.4
SEMA3D-202ENST00000444867 C11orf74Q86VG3 221 aa17.56■□□□□ 0.4
SEMA3D-202ENST00000444867 SLC35F3Q8IY50 421 aa17.56■□□□□ 0.4
SEMA3D-202ENST00000444867 CLIP4Q8N3C7 705 aa17.56■□□□□ 0.4
SEMA3D-202ENST00000444867 OR52R1Q8NGF1 315 aa17.56■□□□□ 0.4
SEMA3D-202ENST00000444867 GNPDA2Q8TDQ7 276 aa17.56■□□□□ 0.4
SEMA3D-202ENST00000444867 FCGR1BQ92637 280 aa17.56■□□□□ 0.4
SEMA3D-202ENST00000444867 RIT1Q92963 219 aa17.56■□□□□ 0.4
SEMA3D-202ENST00000444867 MVB12AQ96EY5 273 aa17.56■□□□□ 0.4
SEMA3D-202ENST00000444867 DGAT2Q96PD7 388 aa17.56■□□□□ 0.4
SEMA3D-202ENST00000444867 ELF4Q99607 663 aaPredicted RBP17.56■□□□□ 0.4
SEMA3D-202ENST00000444867 MCHR1Q99705 422 aa17.56■□□□□ 0.4
SEMA3D-202ENST00000444867 BCL7BQ9BQE9 202 aa17.56■□□□□ 0.4
SEMA3D-202ENST00000444867 COPS4Q9BT78 406 aa17.56■□□□□ 0.4
SEMA3D-202ENST00000444867 ARMC7Q9H6L4 198 aa17.56■□□□□ 0.4
SEMA3D-202ENST00000444867 CLN6Q9NWW5 311 aa17.56■□□□□ 0.4
SEMA3D-202ENST00000444867 MN1Q10571 1320 aaPredicted RBP17.55■□□□□ 0.4
SEMA3D-202ENST00000444867 BRINP1O60477 761 aa17.55■□□□□ 0.4
SEMA3D-202ENST00000444867 TPST2O60704 377 aa17.55■□□□□ 0.4
SEMA3D-202ENST00000444867 GNSP15586 552 aa17.55■□□□□ 0.4
SEMA3D-202ENST00000444867 MMP11P24347 488 aa17.55■□□□□ 0.4
SEMA3D-202ENST00000444867 POU1F1P28069 291 aa17.55■□□□□ 0.4
SEMA3D-202ENST00000444867 GABRA3P34903 492 aa17.55■□□□□ 0.4
SEMA3D-202ENST00000444867 STT3AP46977 705 aa17.55■□□□□ 0.4
SEMA3D-202ENST00000444867 ARL4DP49703 201 aa17.55■□□□□ 0.4
SEMA3D-202ENST00000444867 GP2P55259 537 aaKnown RBP17.55■□□□□ 0.4
SEMA3D-202ENST00000444867 HSD11B2P80365 405 aa17.55■□□□□ 0.4
SEMA3D-202ENST00000444867 BNIP3Q12983 259 aa17.55■□□□□ 0.4
SEMA3D-202ENST00000444867 GPR68Q15743 365 aa17.55■□□□□ 0.4
SEMA3D-202ENST00000444867 SYT6Q5T7P8 510 aaPredicted RBP17.55■□□□□ 0.4
SEMA3D-202ENST00000444867 LYSMD4Q5XG99 296 aa17.55■□□□□ 0.4
SEMA3D-202ENST00000444867 PTCHD4Q6ZW05 846 aa17.55■□□□□ 0.4
SEMA3D-202ENST00000444867 PLEKHM3Q6ZWE6 761 aa17.55■□□□□ 0.4
SEMA3D-202ENST00000444867 AHSA2Q719I0 299 aa17.55■□□□□ 0.4
SEMA3D-202ENST00000444867 MED25Q71SY5 747 aa17.55■□□□□ 0.4
SEMA3D-202ENST00000444867 ZER1Q7Z7L7 766 aa17.55■□□□□ 0.4
SEMA3D-202ENST00000444867 KMT5CQ86Y97 462 aa17.55■□□□□ 0.4
SEMA3D-202ENST00000444867 PIK3R3Q92569 461 aa17.55■□□□□ 0.4
SEMA3D-202ENST00000444867 ALOXE3Q9BYJ1 711 aa17.55■□□□□ 0.4
SEMA3D-202ENST00000444867 SPRTNQ9H040 489 aaPredicted RBP17.55■□□□□ 0.4
SEMA3D-202ENST00000444867 SEMA4GQ9NTN9 838 aa17.55■□□□□ 0.4
SEMA3D-202ENST00000444867 TRIOO75962 3097 aa17.55■□□□□ 0.4
SEMA3D-202ENST00000444867 A0A087WUU8 490 aa17.54■□□□□ 0.4
SEMA3D-202ENST00000444867 TTC36A6NLP5 189 aa17.54■□□□□ 0.4
SEMA3D-202ENST00000444867 CPSF4LA6NMK7 179 aaKnown RBP17.54■□□□□ 0.4
SEMA3D-202ENST00000444867 INMTO95050 263 aa17.54■□□□□ 0.4
SEMA3D-202ENST00000444867 TP53P04637 393 aaPredicted RBP17.54■□□□□ 0.4
SEMA3D-202ENST00000444867 GIMD1P0DJR0 217 aa17.54■□□□□ 0.4
SEMA3D-202ENST00000444867 NID1P14543 1247 aa17.54■□□□□ 0.4
SEMA3D-202ENST00000444867 MAT1AQ00266 395 aaKnown RBP17.54■□□□□ 0.4
SEMA3D-202ENST00000444867 SERTAD2Q14140 314 aa17.54■□□□□ 0.4
SEMA3D-202ENST00000444867 DECR1Q16698 335 aa17.54■□□□□ 0.4
SEMA3D-202ENST00000444867 CCNJQ5T5M9 372 aa17.54■□□□□ 0.4
SEMA3D-202ENST00000444867 TMEM236Q5W0B7 351 aa17.54■□□□□ 0.4
SEMA3D-202ENST00000444867 CWF19L1Q69YN2 538 aaKnown RBP17.54■□□□□ 0.4
SEMA3D-202ENST00000444867 DGAT2L6Q6ZPD8 337 aa17.54■□□□□ 0.4
SEMA3D-202ENST00000444867 RANBP3LQ86VV4 465 aaPredicted RBP17.54■□□□□ 0.4
SEMA3D-202ENST00000444867 WDR5BQ86VZ2 330 aa17.54■□□□□ 0.4
SEMA3D-202ENST00000444867 C7orf57Q8NEG2 295 aa17.54■□□□□ 0.4
SEMA3D-202ENST00000444867 OR51Q1Q8NH59 317 aa17.54■□□□□ 0.4
SEMA3D-202ENST00000444867 DOK4Q8TEW6 326 aa17.54■□□□□ 0.4
SEMA3D-202ENST00000444867 GGHQ92820 318 aa17.54■□□□□ 0.4
SEMA3D-202ENST00000444867 Q96MT0 163 aa17.54■□□□□ 0.4
SEMA3D-202ENST00000444867 RBCK1Q9BYM8 510 aa17.54■□□□□ 0.4
SEMA3D-202ENST00000444867 GPN2Q9H9Y4 310 aaPredicted RBP17.54■□□□□ 0.4
SEMA3D-202ENST00000444867 FOLH1BQ9HBA9 442 aa17.54■□□□□ 0.4
SEMA3D-202ENST00000444867 ACOT13Q9NPJ3 140 aa17.54■□□□□ 0.4
SEMA3D-202ENST00000444867 TIMMDC1Q9NPL8 285 aa17.54■□□□□ 0.4
SEMA3D-202ENST00000444867 WARS2Q9UGM6 360 aaKnown RBP17.54■□□□□ 0.4
SEMA3D-202ENST00000444867 KLHL3Q9UH77 587 aa17.54■□□□□ 0.4
SEMA3D-202ENST00000444867 HEMK1Q9Y5R4 338 aaPredicted RBP17.54■□□□□ 0.4
SEMA3D-202ENST00000444867 H3BN98 237 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms