RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 SCAMP2O15127 329 aaKnown RBP17.14■□□□□ 0.33
ATPAF2-201ENST00000444058 FADS1O60427 444 aa17.14■□□□□ 0.33
ATPAF2-201ENST00000444058 HSPA4LO95757 839 aa17.14■□□□□ 0.33
ATPAF2-201ENST00000444058 MYZAPP0CAP1 466 aa17.14■□□□□ 0.33
ATPAF2-201ENST00000444058 CYP4B1P13584 511 aa17.14■□□□□ 0.33
ATPAF2-201ENST00000444058 CPN1P15169 458 aa17.14■□□□□ 0.33
ATPAF2-201ENST00000444058 EVI2BP34910 448 aa17.14■□□□□ 0.33
ATPAF2-201ENST00000444058 TIMP3P35625 211 aa17.14■□□□□ 0.33
ATPAF2-201ENST00000444058 ADH7P40394 386 aa17.14■□□□□ 0.33
ATPAF2-201ENST00000444058 MAD2L1Q13257 205 aaPredicted RBP17.14■□□□□ 0.33
ATPAF2-201ENST00000444058 HSPB2Q16082 182 aa17.14■□□□□ 0.33
ATPAF2-201ENST00000444058 SMU1Q2TAY7 513 aa17.14■□□□□ 0.33
ATPAF2-201ENST00000444058 SLC25A35Q3KQZ1 300 aa17.14■□□□□ 0.33
ATPAF2-201ENST00000444058 ACSF3Q4G176 576 aaPredicted RBP17.14■□□□□ 0.33
ATPAF2-201ENST00000444058 ZCCHC12Q6PEW1 402 aa17.14■□□□□ 0.33
ATPAF2-201ENST00000444058 LACC1Q8IV20 430 aa17.14■□□□□ 0.33
ATPAF2-201ENST00000444058 CDRT4Q8N9R6 151 aa17.14■□□□□ 0.33
ATPAF2-201ENST00000444058 CLHC1Q8NHS4 586 aa17.14■□□□□ 0.33
ATPAF2-201ENST00000444058 WDYHV1Q96HA8 205 aa17.14■□□□□ 0.33
ATPAF2-201ENST00000444058 SDHAF3Q9NRP4 125 aa17.14■□□□□ 0.33
ATPAF2-201ENST00000444058 FAM120CQ9NX05 1096 aaKnown RBP17.14■□□□□ 0.33
ATPAF2-201ENST00000444058 NKX2-2O95096 273 aa17.13■□□□□ 0.33
ATPAF2-201ENST00000444058 KCNH1O95259 989 aa17.13■□□□□ 0.33
ATPAF2-201ENST00000444058 PRPS1L1P21108 318 aa17.13■□□□□ 0.33
ATPAF2-201ENST00000444058 MSX1P28360 303 aa17.13■□□□□ 0.33
ATPAF2-201ENST00000444058 GABRA3P34903 492 aa17.13■□□□□ 0.33
ATPAF2-201ENST00000444058 CHI3L2Q15782 390 aa17.13■□□□□ 0.33
ATPAF2-201ENST00000444058 IL23RQ5VWK5 629 aa17.13■□□□□ 0.33
ATPAF2-201ENST00000444058 NSUN5P2Q63ZY6 315 aa17.13■□□□□ 0.33
ATPAF2-201ENST00000444058 ENPP6Q6UWR7 440 aa17.13■□□□□ 0.33
ATPAF2-201ENST00000444058 SEM1Q6ZVN7 128 aa17.13■□□□□ 0.33
ATPAF2-201ENST00000444058 YRDCQ86U90 279 aaKnown RBP17.13■□□□□ 0.33
ATPAF2-201ENST00000444058 FNDC5Q8NAU1 212 aa17.13■□□□□ 0.33
ATPAF2-201ENST00000444058 OR14L1PQ8NHC6 308 aa17.13■□□□□ 0.33
ATPAF2-201ENST00000444058 ZPLD1Q8TCW7 415 aa17.13■□□□□ 0.33
ATPAF2-201ENST00000444058 TUBGCP3Q96CW5 907 aa17.13■□□□□ 0.33
ATPAF2-201ENST00000444058 C14orf79Q96F83 325 aa17.13■□□□□ 0.33
ATPAF2-201ENST00000444058 PKNOX2Q96KN3 472 aa17.13■□□□□ 0.33
ATPAF2-201ENST00000444058 MS4A4EQ96PG1 132 aa17.13■□□□□ 0.33
ATPAF2-201ENST00000444058 PRPF18Q99633 342 aaKnown RBP17.13■□□□□ 0.33
ATPAF2-201ENST00000444058 UCK2Q9BZX2 261 aa17.13■□□□□ 0.33
ATPAF2-201ENST00000444058 CENPHQ9H3R5 247 aa17.13■□□□□ 0.33
ATPAF2-201ENST00000444058 HHATLQ9HCP6 504 aa17.13■□□□□ 0.33
ATPAF2-201ENST00000444058 ATAD3AQ9NVI7 634 aa17.13■□□□□ 0.33
ATPAF2-201ENST00000444058 ASIC5Q9NY37 505 aa17.13■□□□□ 0.33
ATPAF2-201ENST00000444058 TAS2R10Q9NYW0 307 aa17.13■□□□□ 0.33
ATPAF2-201ENST00000444058 EIF3LQ9Y262 564 aaKnown RBP17.13■□□□□ 0.33
ATPAF2-201ENST00000444058 RAP2CQ9Y3L5 183 aa17.13■□□□□ 0.33
ATPAF2-201ENST00000444058 ADGRG4Q8IZF6 3080 aa17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 NKX2-6A6NCS4 301 aa17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 CD8B2A6NJW9 211 aa17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 FAM90A27PA6NNH2 459 aa17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 EMC8O43402 210 aa17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 SKAP2O75563 359 aaPredicted RBP17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 SNRPB2P08579 225 aaKnown RBP17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 SSTR2P30874 369 aa17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 CEACAM8P31997 349 aaPredicted RBP17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 CLK3P49761 638 aaKnown RBP17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 GFRA1P56159 465 aa17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 C21orf58P58505 322 aa17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 ABCE1P61221 599 aaKnown RBP17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 PRR5P85299 388 aa17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 EMX2Q04743 252 aa17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 MPP2Q14168 576 aa17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 PTGR1Q14914 329 aa17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 CES4AQ5XG92 561 aa17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 AAGABQ6PD74 315 aa17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 IFNEQ86WN2 208 aa17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 ZNF295-AS1Q8N0V1 137 aa17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 NUP43Q8NFH3 380 aa17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 PSMA8Q8TAA3 256 aa17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 COQ8BQ96D53 544 aa17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 GIMAP5Q96F15 307 aa17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 CALHM2Q9HA72 323 aa17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 SLC24A3Q9HC58 644 aa17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 NPDC1Q9NQX5 325 aaPredicted RBP17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 GIMAP2Q9UG22 337 aa17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 HAO1Q9UJM8 370 aa17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 FBXL2Q9UKC9 423 aa17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 FREM3P0C091 2139 aa17.12■□□□□ 0.33
ATPAF2-201ENST00000444058 CREBBPQ92793 2442 aa17.11■□□□□ 0.33
ATPAF2-201ENST00000444058 WDR91A4D1P6 747 aa17.11■□□□□ 0.33
ATPAF2-201ENST00000444058 ITM2AO43736 263 aa17.11■□□□□ 0.33
ATPAF2-201ENST00000444058 ERLIN1O75477 346 aa17.11■□□□□ 0.33
ATPAF2-201ENST00000444058 CHMP24386 653 aa17.11■□□□□ 0.33
ATPAF2-201ENST00000444058 LCN1P31025 176 aa17.11■□□□□ 0.33
ATPAF2-201ENST00000444058 RPL14P50914 215 aaKnown RBP17.11■□□□□ 0.33
ATPAF2-201ENST00000444058 DSCR4P56555 118 aaPredicted RBP17.11■□□□□ 0.33
ATPAF2-201ENST00000444058 EXOSC6Q5RKV6 272 aaKnown RBP17.11■□□□□ 0.33
ATPAF2-201ENST00000444058 CPTPQ5TA50 214 aa17.11■□□□□ 0.33
ATPAF2-201ENST00000444058 MFSD12Q6NUT3 480 aa17.11■□□□□ 0.33
ATPAF2-201ENST00000444058 MEX3BQ6ZN04 569 aaKnown RBP17.11■□□□□ 0.33
ATPAF2-201ENST00000444058 WDR53Q7Z5U6 358 aaPredicted RBP17.11■□□□□ 0.33
ATPAF2-201ENST00000444058 RIMKLAQ8IXN7 391 aa17.11■□□□□ 0.33
ATPAF2-201ENST00000444058 LRRC34Q8IZ02 419 aa17.11■□□□□ 0.33
ATPAF2-201ENST00000444058 ZNF781Q8N8C0 355 aa17.11■□□□□ 0.33
ATPAF2-201ENST00000444058 FADS6Q8N9I5 356 aa17.11■□□□□ 0.33
ATPAF2-201ENST00000444058 GPR151Q8TDV0 419 aa17.11■□□□□ 0.33
ATPAF2-201ENST00000444058 EQTNQ9NQ60 294 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms