RNA–Protein interactions for RNA: ENST00000443638.1

TM9SF3-202, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 3

Gene TM9SF3, Length 868 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-202ENST00000443638 RASD1Q9Y272 281 aa4.54□□□□□ -1.68
TM9SF3-202ENST00000443638 MRPL11Q9Y3B7 192 aaKnown RBP4.54□□□□□ -1.68
TM9SF3-202ENST00000443638 CSDC2Q9Y534 153 aaKnown RBP4.54□□□□□ -1.68
TM9SF3-202ENST00000443638 PPIAL4AQ9Y536 164 aa4.54□□□□□ -1.68
TM9SF3-202ENST00000443638 TIMM10BQ9Y5J6 103 aa4.54□□□□□ -1.68
TM9SF3-202ENST00000443638 SELENOKQ9Y6D0 94 aa4.54□□□□□ -1.68
TM9SF3-202ENST00000443638 COMMD3-BMI1R4GMX3 469 aa4.54□□□□□ -1.68
TM9SF3-202ENST00000443638 CKAP5Q14008 2032 aa4.54□□□□□ -1.68
TM9SF3-202ENST00000443638 ATP10AO60312 1499 aa4.54□□□□□ -1.68
TM9SF3-202ENST00000443638 ARID2Q68CP9 1835 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 AFF2P51816 1311 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 TRAV25A0A0B4J276 109 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 TAPBPO15533 448 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 PRKAB2O43741 272 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 IGSF6O95976 241 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 ERVK-10P10266 1014 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 FGF3P11487 239 aaPredicted RBP4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 DAOP14920 347 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 CSNK1EP49674 416 aaKnown RBP4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 RAB9AP51151 201 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 EFNB2P52799 333 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 CRYBB1P53674 252 aaPredicted RBP4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 RAG2P55895 527 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 BDH1Q02338 343 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 DPTQ07507 201 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 GK3PQ14409 553 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 SNAI3Q3KNW1 292 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 TMEM52BQ4KMG9 183 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 MTX3Q5HYI7 312 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 FAM76BQ5HYJ3 339 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 BEND6Q5SZJ8 279 aaPredicted RBP4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 PXDC1Q5TGL8 231 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 KIAA1161Q6NSJ0 714 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 PNCKQ6P2M8 343 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 KCNIP4Q6PIL6 250 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 BTNL3Q6UXE8 466 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 MOB3BQ86TA1 216 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 ACOT1Q86TX2 421 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 PRIMA1Q86XR5 153 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 TGIF2LXQ8IUE1 241 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 CLEC4FQ8N1N0 589 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 PELI3Q8N2H9 469 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 SPERTQ8NA61 448 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 KBTBD3Q8NAB2 608 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 OR2L3Q8NG85 312 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 OR6F1Q8NGZ6 308 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 LRRC15Q8TF66 581 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 SORCS1Q8WY21 1168 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 ELMO1Q92556 727 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 ART4Q93070 314 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 LHX4Q969G2 390 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 C18orf25Q96B23 403 aaPredicted RBP4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 C10orf35Q96D05 121 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 ELMO2Q96JJ3 720 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 SLC38A2Q96QD8 506 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 NKX3-1Q99801 234 aaPredicted RBP4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 TMEM121Q9BTD3 319 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 MRPL37Q9BZE1 423 aaKnown RBP4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 IQCGQ9H095 443 aaKnown RBP4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 AZI2Q9H6S1 392 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 Q9HAA7 133 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 CYP3A43Q9HB55 503 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 ZNF160Q9HCG1 818 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 UBE2TQ9NPD8 197 aaPredicted RBP4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 SIGLEC8Q9NYZ4 499 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 TCF19Q9Y242 345 aa4.53□□□□□ -1.68
TM9SF3-202ENST00000443638 INSRP06213 1382 aa4.53□□□□□ -1.69
TM9SF3-202ENST00000443638 LRP5LA4QPB2 252 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 ZNF840PA6NDX5 716 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 FAM74A7A6NL05 159 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 GABRR3A8MPY1 467 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 SUPT3HB4E1H0 165 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 TCP10L2B9ZVM9 353 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 HAS3O00219 553 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 CYB561D2O14569 222 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 LGI1O95970 557 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 NGFP01138 241 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 SP1P08047 785 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 H2BFMP0C1H6 154 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 GIFP27352 417 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 DCTP40126 519 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 EPS15P42566 896 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 NAMPTP43490 491 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 BDKRB1P46663 353 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 BRCC3P46736 316 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 RPS5P46782 204 aaKnown RBP4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 ATP1B3P54709 279 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 NOP14P78316 857 aaKnown RBP4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 BNIP1Q12981 228 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 DNAJC3Q13217 504 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 TAB1Q15750 504 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 MICBQ29980 383 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 FAM74A3Q4VXF1 159 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 HIKESHIQ53FT3 197 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 AGBL2Q5U5Z8 902 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 AGAP7PQ5VUJ5 663 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 TTC19Q6DKK2 380 aaPredicted RBP4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 DOK6Q6PKX4 331 aa4.52□□□□□ -1.69
TM9SF3-202ENST00000443638 VITQ6UXI7 678 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms